FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SYNS9 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9902) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 60/159 (37.74%), Postives = 83/159 (52.20%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV-----KDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +T L++ GG+MVPFAGW MP+Q+ I E R + +FD+SHM L L+G + L++LV +D+ + PG TV N+ GG DD +I + K + LV+NA C D D A I M+ G I + LLALQGP A Sbjct: 3 RTPLYELCRTGGGRMVPFAGWEMPVQFSGLIQEHKA-VRNSVGMFDISHMGVLRLEGANPKDTLQQLVPSDLHRIGPGEACYTVLLNDQGGIRDDLIIYDLGAIDEKRGALVLVINAACADSDTAWIRERME----PAGLTVTDIKNNGVLLALQGPQA 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_GLOVI (Aminomethyltransferase OS=Gloeobacter violaceus GN=gcvT PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 58/160 (36.25%), Postives = 80/160 (50.00%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHD---ERSLLALQGPLA 685 +LK+T L H+ G ++VPF GW MP+QY E R LFD+SHM +L G D + +++LV +D+A L PG TV NE G IDD + +H ++VN DKD + H++ H D +LLALQGP A Sbjct: 3 DLKRTPLCAQHLQLGARLVPFGGWEMPLQYSTLTREHRA-VRTAVGLFDISHMGKYTLSGPDVLAQIQRLVPSDLARLQPGQAQYTVLLNEQAGIIDDLIFYCRSPEHWVVIVNGATNDKDRRWLAEHLQGV---------HFDDLTGTHTLLALQGPAA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHESW (Aminomethyltransferase OS=Shewanella sp. (strain W3-18-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + +EN G IDD + + D +VVN+ R+KDLA I + F D++ E +++A+QGP A Sbjct: 4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGTDACAFLRKLLANDVARLKVPGKALYSGMLDENAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGF-----DITVTERPELAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHEPC (Aminomethyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + +EN G IDD + + D +VVN+ R+KDLA I + F D++ E +++A+QGP A Sbjct: 4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGTDACAFLRKLLANDVARLKVPGKALYSGMLDENAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGF-----DITVTERPELAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PELPB (Aminomethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +KKTAL+ +H G K++ F G+ MP+QY+ I E R LFDVSHM ++G FL+ + D+ G + +GG +DD +I ++ + +L+VNA KD ++ H+ +F G V D+ SL+ALQGPLA Sbjct: 1 MKKTALYSWHEEAGAKIIDFGGYLMPVQYRGIIAEHHA-VRSAAGLFDVSHMGNFYVRGARAKEFLQYMTTNDLDNAEDGQAQYNLMLYPHGGIVDDLIIYRIDSETFFLIVNASNAQKDFEWLQQHIAAFE---GVVLEDHTDQLSLIALQGPLA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BORA1 (Aminomethyltransferase OS=Bordetella avium (strain 197N) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 63/159 (39.62%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSWHIHDERSLLALQGPLA 685 +LK T L + H+A G +MV F GW MP+ Y S +E RQ+ +FDVSHM + G D FL LV DVA L PG + N GG IDD +I D +VVNAG +KD+ A M A G DV + +++A+QGP A Sbjct: 4 SLKHTPLAETHLAAGARMVDFGGWEMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNADITGPDATAFLRYLVANDVARLNTPGKALYSCMLNPQGGVIDDLIIYYFAPDSWRVVVNAGTAEKDM----AWMARVAAAGNFDVVITPRRDLAMIAVQGPNA 157
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_AERS4 (Aminomethyltransferase OS=Aeromonas salmonicida (strain A449) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 62/157 (39.49%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++ T LH H+ G KMV F GW MPI Y S +E R + +FDVSHM + L G+ FL+ L+ DVA L PG + N +GG IDD + + D LVVN+ R+KDLA I H F VS E +++A+QGP A Sbjct: 2 IQTTVLHPKHLEAGAKMVDFHGWEMPINY-GSQLEEHHAVRTDAGMFDVSHMTIVDLTGERVKAFLQHLLANDVAKLTVPGKALYSGMLNPDGGVIDDLITYYLTDTFYRLVVNSATREKDLAWIRHHAIDFA-----VSVTERPELAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_LYSSC (Aminomethyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 57/156 (36.54%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 LK+T L + + G K V F GW +P+Q+ SI + R LFDVSHM + + G D + FL+ L+ DV+ +A G T ENGG +DD + K+ DDH L VNA +KD + + + + S D + +ALQGPLA Sbjct: 5 LKRTPLFEEYAKYGAKTVDFGGWELPVQFS-SIKDEHDAVRNRAGLFDVSHMGEILVTGPDALNFLQNLLSNDVSKIATGQAQYTAMCYENGGVVDDLLTYKLADDHYLLCVNAANIEKDYDWMLENQHQYDVTIDNQS----DAYAQIALQGPLA 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CHLPD (Aminomethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER-SLLALQGPLA 685 +KKTAL+ +H G +++ F G+ MP+QY I E R LFDVSHM + G+ FL+ +V D++ + G + NGG +DD +I ++ +L+VNA +KD A ++ H+ +F V H +R SL+ALQGP+A Sbjct: 1 MKKTALYHWHEQAGARIIDFGGYLMPVQYSGIIAEHRA-VRSAAGLFDVSHMGNFYVTGERSEAFLQYMVTNDLSKVRDGEAQYNLMLYPNGGVVDDLIIYRLDSKTFFLIVNASNTEKDYAWLQQHIGAFDG----VCLEDHTDRLSLIALQGPVA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CHLL2 (Aminomethyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +KKTAL+ +H G K++ F G+ MP+QY I E R+ LFDVSHM ++G FL+ L D++ ++ G + +GG +DD +I ++ + +L+VNA KD A I+ H+ +F G DE SL+ALQGP++ Sbjct: 1 MKKTALYSWHEQAGAKIIDFGGYLMPVQYSGIIAEHKA-VREAAGLFDVSHMGNFYVRGVRAGEFLQYLTTNDLSKVSDGEAQYNLMLYTDGGVVDDLIIYRIDAETYFLIVNASNAQKDYAWIQKHIGAFE---GVSLEDRTDELSLVALQGPMS 152 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |