FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SYNPX (Aminomethyltransferase OS=Synechococcus sp. (strain WH8102) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 58/159 (36.48%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 L++T LH GG+MVPFAGW MP+Q+ I E R+ +FD+SHM L L+G + L++LV +D+ + PG TV NE+GG DD ++ + + LV+NA C + D A I M+ D + LLALQGP Sbjct: 3 LQRTPLHQLCQDGGGRMVPFAGWEMPVQFSGLIQEHKA-VREQVGMFDISHMGVLRLEGPNPKDALQQLVPSDLHRIGPGEACYTVLLNESGGIRDDLIVYDCGAVDAERGALVLVINAACAEADTAWIRDQMEPAGLTVSD----LKAGGVLLALQGP 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ERWT9 (Aminomethyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L H A+G +MV F GW MP+ Y S M+ R++ +FDVSHM + L G FL L+ DVA L PG + N + G IDD ++ + +D LVVN+ R+KDLA I H ++ V D+ SL+A+QGP A Sbjct: 3 QQTPLFAQHQASGARMVDFHGWMMPLHY-GSQMDEHHAVRRDAGMFDVSHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYSAMLNASAGVIDDLIVYFISEDFFRLVVNSATREKDLAWIVEHAAAY-----GVQLTERDDLSLIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ALTMD (Aminomethyltransferase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=gcvT PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 227 TALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 TALH H+ G KMV F GW MPI Y I E RQ+ +FDVSHM + +KG +L+ L+ DVA L G + NE GG +DD ++ + + LVVN+ R+KD+ + + A+G DV+ E +++A+QGP A Sbjct: 5 TALHTKHLEAGAKMVDFFGWDMPINYGSQIEEHHA-VRQDAGMFDVSHMTIVDVKGAQAKAYLQYLLANDVAKLKDKGKALYSGMLNEEGGVVDDLIVYHFDETNYRLVVNSATREKDMNWLMS-----KAEGFDVTITERPEFAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SYNR3 (Aminomethyltransferase OS=Synechococcus sp. (strain RCC307) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 57/146 (39.04%), Postives = 80/146 (54.79%), Query Frame = 2 Query: 257 GGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERS---LLALQGPLA 685 GG+MVPFAGW M +Q+ + +M RQ +FD+SHM L+L G L+ LV +D+ + PG TV NE GG DD ++ D + +V+NA C D D A I+ ++ +G VS D ++ LLALQGP A Sbjct: 14 GGRMVPFAGWEMAVQF-EGLMAEHRAVRQRCGVFDISHMGVLTLTGSGVKDKLQGLVPSDLQRIGPGEAQYTVLLNEAGGIRDDLIVYDRSDTEVVVVINAACADSDTAWIKQQLE---PQGVSVS----DRKAGGVLLALQGPEA 151
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PSEA6 (Aminomethyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 57/155 (36.77%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KT LH H+ +G KMV F GW MPI Y I E R+ +FDVSHM + + G+ +L L+ DVA L G + NE GG +DD ++ + + LVVN+ R KD+ + A A+G DV+ E +++A+QGP A Sbjct: 4 KTVLHSKHLESGAKMVDFHGWEMPINYGSQIEEHHA-VRRTAGMFDVSHMTIVDVVGEQAQDYLRHLLANDVAKLKERGKALYSGMLNEEGGVVDDLIVYHFETTNYRLVVNSATRQKDMDWLNAQ-----AEGFDVTITERPEFAMIAVQGPQA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BACFR (Aminomethyltransferase OS=Bacteroides fragilis GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +K T + H+A G KM FAG++MPI+Y I E C G +FDVSHM +KG + FL+K+ +VA L PG T F NE+GG +DD ++ + + + LVVNA +KD +H +G ++ + D + LA+QGP A Sbjct: 1 MKTTPFTEKHIALGAKMHEFAGYNMPIEYSGIIDEHLTVCNGVG-VFDVSHMGEFWVKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASNIEKDWNWCISH----NTEGAELE-NSSDNMAQLAVQGPKA 150
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BACFN (Aminomethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +K T + H+A G KM FAG++MPI+Y I E C G +FDVSHM +KG + FL+K+ +VA L PG T F NE+GG +DD ++ + + + LVVNA +KD +H +G ++ + D + LA+QGP A Sbjct: 1 MKTTPFTEKHIALGAKMHEFAGYNMPIEYSGIIDEHLTVCNGVG-VFDVSHMGEFWVKGPHALDFLQKVTSNNVAALVPGKIQYTCFPNEDGGIVDDLLVYQYEPEKYLLVVNASNIEKDWNWCISH----NTEGAELE-NSSDNMAQLAVQGPKA 150
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ECOLU (Aminomethyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFSEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ECO5E (Aminomethyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHH-EVRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ECO57 (Aminomethyltransferase OS=Escherichia coli O157:H7 GN=gcvT PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHH-EVRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |