FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CELJU (Aminomethyltransferase OS=Cellvibrio japonicus (strain Ueda107) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18 Identity = 59/156 (37.82%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL--APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 KTAL+D H + GGK+V F GW MP+ Y I E RQ+ +FDVSHM + + G D +L+ L+ DVA L G + NE GG IDD ++ + D +VVN R+KDLA + S A V + +++A+QGP A Sbjct: 4 KTALYDIHQSMGGKIVDFGGWDMPLHYGSQIDEHH-KVRQHAGMFDVSHMTVVDVTGSDAKAYLQYLLANDVAKLDNLVGKALYSGMLNEQGGVIDDLIVYNM-GDWYRVVVNCSTREKDLAWM-----SQVANNYQVKLQERADLAMIAVQGPQA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHISS (Aminomethyltransferase OS=Shigella sonnei (strain Ss046) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHIFL (Aminomethyltransferase OS=Shigella flexneri GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHIDS (Aminomethyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHIBS (Aminomethyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_OCEIH (Aminomethyltransferase OS=Oceanobacillus iheyensis GN=gcvT PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 K+T + + ++G K + F GW +P+Q+ SI R LFDVSHM +S+KG FL+ ++ D++ L PG T+ E+GG++DD ++ K+ D+ LVVNA +KD I+ K+ + V + ++ LA+QGP A Sbjct: 5 KRTPIFTEYASHGAKTIDFGGWDLPVQFS-SIKHEHEVTRTKAGLFDVSHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDEDYLLVVNAANTEKDANWIK--QKNTYSNDEIVIEDVSNQYVQLAIQGPKA 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ESCF3 (Aminomethyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ECOUT (Aminomethyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ECOSM (Aminomethyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ECOSE (Aminomethyltransferase OS=Escherichia coli (strain SE11) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |