FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ECO24 (Aminomethyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BACTN (Aminomethyltransferase OS=Bacteroides thetaiotaomicron GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +K T + H+A G KM FAG++MPI+Y I E C G +FDVSHM +KG + FL+K+ +VA L PG T F NE GG +DD ++ + + LVVNA +KD +H +G ++ + D + LA+QGP A Sbjct: 1 MKTTPFTEKHIALGAKMHEFAGYNMPIEYSGIIDEHLTVCNAVG-VFDVSHMGEFWVKGPQALAFLQKVTSNNVAALVPGKIQYTCFPNEEGGIVDDLLVYCYEPEKYLLVVNAANIEKDWNWCVSH----NTEGAELE-NSSDNMAQLAVQGPKA 150
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHIB3 (Aminomethyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDLFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SALAR (Aminomethyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDLA I H + + + + D+ SL+A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLAWITQHAEPYA-----IDITVRDDLSLIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PSESM (Aminomethyltransferase OS=Pseudomonas syringae pv. tomato GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 56/156 (35.90%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L D H+A G KMV F GW MP+ Y + E R++ +FDVSHM + + G++ +L +L+ DV L PG + +E G IDD ++ D + LVVNA KDLA +++ + F DV E ++LA+QGP A Sbjct: 3 QRTPLFDLHLALGAKMVDFGGWDMPLHYGSQVEEHH-QVRRDCGVFDVSHMNVIDVLGREAKAWLRRLLANDVDKLKTPGRALYSAMLDEQAGVIDDMIVYLTADGY-RLVVNAATGAKDLAWMQSQLGDF-----DVQLLARSEMAMLAIQGPQA 151
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_COXBU (Aminomethyltransferase OS=Coxiella burnetii GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 59/156 (37.82%), Postives = 78/156 (50.00%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 + + L++ H V FAGW MP+ Y I E RQ +FDVSHM + L+G++ FL L+ DVA L+ G T N GG IDD ++ +V LVVNA RDKD+A I+ G VS E +LA+QGP A Sbjct: 3 RHSPLYEEHAKAKAHFVDFAGWEMPLHYGSQIEEHH-QVRQRAGIFDVSHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGYRLVVNAATRDKDIAWIKE-----KGAGYKVSISERPEMCILAVQGPQA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CITK8 (Aminomethyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_THEEB (Aminomethyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17 Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 203 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERS---LLALQGPLA 685 S AE L++T L+ H G + PF W MP+QY SI++ RQ +FD+SHM L L+G+ + L+ LV +++ L PG TV NE GG +DD VI + D + +VNA KD A + ++ + S + DE + L+ALQGP A Sbjct: 3 SMAEALQRTPLYPLH--QGARFTPFGDWEMPLQYS-SILQEHQAVRQQVGMFDISHMGKLVLRGEGVLGALQTLVPTNLSQLQPGQAKYTVLLNEAGGIVDD-VILYMGDGQVRCIVNAATTAKDWAWFQKYLPA--------SIEVIDESASQVLIALQGPAA 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PSEPK (Aminomethyltransferase OS=Pseudomonas putida (strain KT2440) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17 Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L+D H+A G K V F GW MP+ Y S +E R + +FDVSHM + + G D +L++L+ DVA L PG + NE GG IDD ++ + + + LV NA R K L ++ F+ V + + + ++LA+QGP A Sbjct: 3 QRTLLYDLHLALGAKTVDFGGWDMPLHY-GSQVEEHHQVRSDCGVFDVSHMTVIDVDGTDATVWLQRLLANDVARLDDPGKALYSPLLNEQGGVIDDLIVYRTETGY-RLVTNAATRAKVLDWLQLQRAGFS-----VDFQVRPDLAILAIQGPRA 151
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_EXIS2 (Aminomethyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17 Identity = 57/157 (36.31%), Postives = 87/157 (55.41%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSW-HIHDERSLLALQGPLA 685 LK+T L D +A GKMV FAG+ MP+ + SI E R+ +FDVSHM L + G D + FL++ + D++ +A G V E+GG++DD ++ ++ + LVVNA +KD AH+ ++ GDV + D +A+QGP A Sbjct: 6 LKRTPLFDI-IAPTGKMVDFAGFEMPVLFS-SIKEEHTAVRERVGMFDVSHMGELFVSGSDALAFLQQTLSNDISKIAIGQAQYNVLCQEDGGTVDDLLVYRLDEQDYLLVVNASNIEKDEAHLRQYLT------GDVLLENQSDAYGQIAVQGPKA 154 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |