FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SALA4 (Aminomethyltransferase OS=Salmonella agona (strain SL483) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PROMT (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 57/161 (35.40%), Postives = 83/161 (51.55%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHM--KSFTAKGGDVSWHIHDERSLLALQGP 679 L +T L+ GGKMVPFA W MP+ + I E R+N +FD+SHM + LKGK+ L+ LV +DV + P TVF ENGG DD +I ++ I LV+NA ++ D+ + +++ K T E +L+A+QGP Sbjct: 3 LLQTPLYQECKELGGKMVPFANWEMPVSFSGLIEEHNA-VRKNVGMFDISHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTNEESIVLVINAARKESDIEWLSSNLFKKEITIS------EFMPEGALIAIQGP 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_LISMC (Aminomethyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 54/157 (34.39%), Postives = 79/157 (50.32%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSLLALQGPLA 685 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + +KG D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA DKD + +++ GDVS ++ E LALQGP A Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDFEWMVKNIR------GDVSVTNVSSEYGQLALQGPNA 153
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_LEPBP (Aminomethyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 55/159 (34.59%), Postives = 77/159 (48.43%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGD-VSWHIHDERSLLALQGPLA 685 LK+T LH H G KMVPF GW MP+QY I++ L R N +FDVSHM + + G D + FLE + ++ + G NE GG +DD + K D + NA + H+ ++K + D +WH +ALQGP A Sbjct: 3 LKQTPLHSIHKEMGAKMVPFGGWDMPVQY-TGIIQEHLATRANAGIFDVSHMGEIFVTGDANDVLDFLESVTCNTISTMKEGQVQYNAVVNEVGGLVDDITVYKFNDTKYMICSNASNFEAVTQHLLKYVKGNVSIANDSKNWH------QIALQGPKA 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_LEPBA (Aminomethyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 55/159 (34.59%), Postives = 77/159 (48.43%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGD-VSWHIHDERSLLALQGPLA 685 LK+T LH H G KMVPF GW MP+QY I++ L R N +FDVSHM + + G D + FLE + ++ + G NE GG +DD + K D + NA + H+ ++K + D +WH +ALQGP A Sbjct: 3 LKQTPLHSIHKEMGAKMVPFGGWDMPVQY-TGIIQEHLATRANAGIFDVSHMGEIFVTGDANDVLDFLESVTCNTISTMKEGQVQYNAVVNEVGGLVDDITVYKFNDTKYMICSNASNFEAVTQHLLKYVKGNVSIANDSKNWH------QIALQGPKA 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_ANASP (Aminomethyltransferase OS=Anabaena sp. (strain PCC 7120) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 54/164 (32.93%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH-----IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 AE L +T L+ V ++ F GW MP+Q+ E R +FD+SHM +L+GK+ + L+ LV +D++ L PG TV N GG IDD ++ +D+ +++VNA KD A I +H+ + D+S + L+A+QGP A Sbjct: 8 AETLARTPLYQLGVELKARLTSFGGWEMPVQFSGITREHEA-VRNAAGMFDISHMGKFTLQGKNLISQLQGLVPSDLSRLQPGQAQYTVLLNPQGGIIDDIIVYYQGEDNTGTQQAFIIVNAATTSKDKAWILSHLDQNQVQFQDIS----PAKVLIAIQGPKA 166
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SHIF8 (Aminomethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 ++T L++ H G +MV F W MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F + + D+ S++A+QGP A Sbjct: 3 QQTPLYEQHTLCGARMVDFHSWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF-----GIEITVRDDLSMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_LISMO (Aminomethyltransferase OS=Listeria monocytogenes GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 54/157 (34.39%), Postives = 79/157 (50.32%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSLLALQGPLA 685 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + +KG D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA DKD + +++ GDVS ++ E LALQGP A Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDFEWMVKNIR------GDVSVTNVSSEYGQLALQGPNA 153
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_XANOR (Aminomethyltransferase OS=Xanthomonas oryzae pv. oryzae GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 59/156 (37.82%), Postives = 78/156 (50.00%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +KT L+D H A G KMV F GW MPI Y S ++ R++ +FDVSHM + L G FL L+ V L G T N GG IDD ++ + +D LVVNA R+KDL I F DV + +++A+QGP A Sbjct: 3 QKTILNDTHRALGAKMVDFGGWDMPIHY-GSQLDEHHQVRRDAGMFDVSHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFFRLVVNAATREKDLQWIGEQAVRF-----DVRVEERSDFAMIAVQGPNA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_XANOP (Aminomethyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 59/156 (37.82%), Postives = 78/156 (50.00%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +KT L+D H A G KMV F GW MPI Y S ++ R++ +FDVSHM + L G FL L+ V L G T N GG IDD ++ + +D LVVNA R+KDL I F DV + +++A+QGP A Sbjct: 3 QKTILNDTHRALGAKMVDFGGWDMPIHY-GSQLDEHHQVRRDAGMFDVSHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFFRLVVNAATREKDLQWIGEQAVRF-----DVRVEERSDFAMIAVQGPNA 152 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |