FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BURP8 (Aminomethyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 54/157 (34.39%), Postives = 78/157 (49.68%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 LK T LH H A +MV F GW MP+ Y I E R + +FDVSHMC + G+ F E+ + +V L G + N GG IDD ++ +DH +VVNAG +KD+A K +G ++ + +++A+QGP A Sbjct: 4 LKHTPLHATHRALNARMVDFGGWDMPVNYGSQIEEHRA-VRTDAGMFDVSHMCVVDFTGERVRAFFERALANNVGKLQTAGKALYSCLLNPQGGVIDDLIVYYFGEDHFRVVVNAGTAEKDIAWFN---KLNDEEGFGLTITPRRDYAIVAVQGPNA 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_RALPJ (Aminomethyltransferase OS=Ralstonia pickettii (strain 12J) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 63/167 (37.72%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERS----------LLALQGPLA 685 L+ T L+ H + G +MV F GW MP+ Y I E RQ+ +FDVSHMC + L G FL L+ +V L PG + N GG IDD ++ ++D LVVNAG DL I A A G DV+ I RS +LA+QGP A Sbjct: 3 LQHTPLNAIHRSLGARMVDFGGWDMPVNYGSQIEEHHA-VRQDAGVFDVSHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYSCMLNPKGGVIDDLIVYFFREDWFRLVVNAGTAPTDLEWIVAQN---AAAGTDVT--ITPRRSDNNAGAEPLGILAVQGPNA 163
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_RALME (Aminomethyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 54/163 (33.13%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMK------SFTAKGGDVSWHIHDERSLLALQGPLA 685 L+ T L+ H A G +MV F GW MP+ Y I E R + +FDVSHMC + L G FL L+ ++ L PG + +E GG IDD ++ +D LVVNA D+ I++ + T + GD++ + +++A+QGP A Sbjct: 3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHNA-VRADAGMFDVSHMCVVDLSGIHARAFLRGLLANNIDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRFRLVVNASTAVGDIEWIQSRNTATGSGVTITPRRGDLAPACVSKLAIVAVQGPNA 164
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_RALEJ (Aminomethyltransferase OS=Ralstonia eutropha (strain JMP134) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 57/163 (34.97%), Postives = 80/163 (49.08%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMK------SFTAKGGDVSWHIHDERSLLALQGPLA 685 L+ T L+ H A G +MV F GW MP+ Y I E R + +FDVSHMC + L G + FL L+ +V L PG + +E GG IDD ++ +D LVVNA D+ I A + T + GDV+ +++A+QGP A Sbjct: 3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHNA-VRSDAGMFDVSHMCVVDLNGANTRAFLRGLLANNVDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRFRLVVNASTALGDIEWIRARNDATGSGVTITPRRGDVAPAGALPLAIVAVQGPNA 164
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_LISMH (Aminomethyltransferase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSLLALQGPLA 685 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + ++G D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA KD + +++ GDVS ++ E LALQGP A Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTAKDFEWMVKNIQ------GDVSVTNVSSEYGQLALQGPNA 153
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CUPTR (Aminomethyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 57/163 (34.97%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMK------SFTAKGGDVSWHIHDERSLLALQGPLA 685 L+ T L+ H A G +MV F GW MP+ Y I E R + +FDVSHMC + L G + FL L+ +V L PG + +E+GG IDD ++ +D LVVNAG D+ I A + + T + DV+ +++A+QGP A Sbjct: 3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHHA-VRNDAGMFDVSHMCVVDLAGPNTRAFLRGLLANNVDKLQTPGKALYSCMLDEHGGVIDDLIVYFFAEDRFRLVVNAGTAVGDIDWIRARNEATGSGVTITPRREDVAPAGVPPLAIVAVQGPNA 164
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CORJK (Aminomethyltransferase OS=Corynebacterium jeikeium (strain K411) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 48/156 (30.77%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 LKKTALH H G + F GW MP++Y + E R +FD+SHM + + G FL+ +I+ ++ + G ++ E+GG IDD + ++ D+ +V NAG D ++ ++ + F + + S D S++A+QGP A Sbjct: 4 LKKTALHLVHEKLGARFTDFGGWDMPLKYSSELDEHHA-VRNAVGVFDLSHMGEVRVTGPQAAEFLDHALISKLSAVKVGKAKYSMICTESGGIIDDLITYRLGDNEFLIVPNAGNVDNVVSALQGRTEGFDVEVNNES----DATSMIAVQGPKA 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_AERHH (Aminomethyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 56/154 (36.36%), Postives = 78/154 (50.65%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQG 676 ++ T LH H+ G KMV F GW MPI Y S +E R + +FDVSHM + L G+ FL+ L+ DVA L G + GG IDD + + + LVVN+ R+KDLA I H + F V+ E +++A+QG Sbjct: 2 IQTTVLHPKHLEAGAKMVDFHGWEMPINY-GSQLEEHHQVRTDAGMFDVSHMTIVDLTGERVKAFLQHLLANDVAKLTVFGKALYSGMLTPEGGVIDDLITYYLGETFYRLVVNSATREKDLAWIRHHAQDF-----GVTVTERPELAMIAVQG 149
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_NATPD (Probable aminomethyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15 Identity = 52/158 (32.91%), Postives = 82/158 (51.90%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIH---DERSLLALQGP 679 +L+ L D H G K+ F GW MP+++ DSI R++ FD+SHM + + G D +L DVA LAPG T T+++G +DD+V+ ++ D YL V D+ +A +SF A D++ + D+ +++ALQGP Sbjct: 2 SLRTPPLFDAHTDAGAKLTEFGGWEMPVEF-DSIRTEHDAVRESAGKFDISHMGEIEVSGPDAAALTNRLTTNDVASLAPGEATYAGITDDDGVLLDDTVVYRLPDGATYLFVPNAGNDELMAE---RWRSF-ADRWDLAATVDNATDDYAMVALQGP 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PORGI (Aminomethyltransferase OS=Porphyromonas gingivalis GN=gcvT PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +K T D H+A G KM FAG++MPI+Y I++ +N N +FDVSHM +KG + + FL+K+ D + LA G F N +GG +DD ++ + +++ +V NA KD A G + + D + LA+QGP A Sbjct: 1 MKTTPFTDVHIALGAKMHEFAGYNMPIEY-GGIIDEHMNVVNNVGVFDVSHMGEFWVKGPNALRFLQKVSSNDASKLAVGQVQYCCFPNNDGGIVDDFLLYRYEEEKYMMVPNAANIAKDWAWCRQQNTM-----GAILENASDNIAQLAVQGPKA 150 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |