FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_LISIN (Aminomethyltransferase OS=Listeria innocua GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14 Identity = 51/157 (32.48%), Postives = 77/157 (49.04%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSLLALQGPLA 685 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + ++G D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA +KD + ++ GDV+ + E LALQGP A Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVEGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTEKDYEWMVQNIV------GDVTVKNASSEFGQLALQGPNA 153
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PROMS (Aminomethyltransferase OS=Prochlorococcus marinus (strain AS9601) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14 Identity = 53/160 (33.12%), Postives = 87/160 (54.37%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV---KDD--HIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSLLALQG 676 +L K+ L+ +V + K+V FAGW MPI + I E + R + LFD+SHM +S+KG + +++KL ++ G G TV N+ GG IDD +I + K+D + L+VNA ++D I+ ++ ++S + ++ LLALQG Sbjct: 2 DLLKSPLYSKYVESNAKLVDFAGWEMPISFSGLIKEHE-SVRYSAGLFDISHMGVISIKGINPKDYIQKLFPTNLYSFCEGQGLYTVMLNDKGGIIDDLIIYDLGIQKNDISELLLIVNASRYEEDFQWIKNNLNM-----SEISITNFKKDKVLLALQG 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_MYCLE (Aminomethyltransferase OS=Mycobacterium leprae GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14 Identity = 50/159 (31.45%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 203 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 +DA L K L D H G F GW MP+ Y ++ E + R LFDVSH+ ++G F+ ++ D+ + PG T+ +E+GG IDD + V DD I+LV NA + ++A G + H ++LA+QGP Sbjct: 2 TDAPELLKGPLEDRHRELGANFAEFGGWLMPVSYAGTVSEHSAT-RNAVGLFDVSHLGKALVRGPGAAQFVNSVLTNDLGRIRPGKAQYTLCCSESGGVIDDLIAYYVDDDEIFLVSNAANTAAVVDALQA-----VVPAGLTIINQHRSHAVLAVQGP 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_MYCLB (Aminomethyltransferase OS=Mycobacterium leprae (strain Br4923) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14 Identity = 50/159 (31.45%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 203 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 +DA L K L D H G F GW MP+ Y ++ E + R LFDVSH+ ++G F+ ++ D+ + PG T+ +E+GG IDD + V DD I+LV NA + ++A G + H ++LA+QGP Sbjct: 2 TDAPELLKGPLEDRHRELGANFAEFGGWLMPVSYAGTVSEHSAT-RNAVGLFDVSHLGKALVRGPGAAQFVNSVLTNDLGRIRPGKAQYTLCCSESGGVIDDLIAYYVDDDEIFLVSNAANTAAVVDALQA-----VVPAGLTIINQHRSHAVLAVQGP 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BURCJ (Aminomethyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14 Identity = 52/158 (32.91%), Postives = 75/158 (47.47%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSWHIHDERSLLALQGPLA 685 L T L+ H A +MV F GW MP+ Y I E R + +FDVSHMC + G F E + +V L PG + N GG IDD ++ ++ +VVNAG DKD+ A +GG ++ + +++A+QGP A Sbjct: 4 LNHTPLNAAHRALNARMVDFGGWDMPVNYGSQIEEHAA-VRTDAGMFDVSHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTADKDI----AWFNQLNEQGGYGLTIAPRRDFAIVAVQGPNA 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_THEON (Probable aminomethyltransferase OS=Thermococcus onnurineus (strain NA1) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 50/158 (31.65%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHD---ERSLLALQGPLA 685 K+ + D+H N K+ FAGW MPI Y SI + L R ++FDVSHM KGKD + FL+ + D++ +GT T+ NE G D++++ + +D +V ++ +K A A +K K G++ I + + ++ ++QGP A Sbjct: 3 KRVHIFDWHKKNAKKVEEFAGWEMPIWYS-SIKDEHLAVRNGVAIFDVSHMGEFIFKGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAFEKLEAWFNA-IKRGIEKFGELDLEIENKTYDMAMFSIQGPKA 158
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PYRKO (Probable aminomethyltransferase OS=Pyrococcus kodakaraensis GN=gcvT PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 50/159 (31.45%), Postives = 83/159 (52.20%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHD---ERSLLALQGPLA 685 +K+ + D+H + K+ FAGW MPI Y SI E L R +FDVSHM +GKD + FL+ + D++ +GT T+ NE G D++++ + +D +V ++ +K A A +K K GD+ I + + ++ ++QGP A Sbjct: 2 VKRVHIFDWHKEHAKKVEEFAGWEMPIWYS-SIKEEHLAVRNGVGIFDVSHMGEFIFRGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAFEKLDAWFNA-IKRGIEKFGDIDLEIENKTYDMAMFSIQGPKA 158
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BURA4 (Aminomethyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 52/158 (32.91%), Postives = 75/158 (47.47%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSWHIHDERSLLALQGPLA 685 L T L+ H A +MV F GW MP+ Y I E R + +FDVSHMC + G F E + +V L PG + N GG IDD ++ +D +VVNAG +KD+ A +GG ++ + +++A+QGP A Sbjct: 4 LNHTPLNAAHRALNARMVDFGGWDMPVNYGSQIEEHEA-VRTDAGMFDVSHMCVVDFTGSRVRAFFEHAIANNVGKLKTPGKALYSCLLNPQGGVIDDLIVYYFTEDFFRVVVNAGTAEKDI----AWFNQLNEQGGYGLTIAPRRDFAIVAVQGPNA 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PROM2 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9215) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14 Identity = 52/160 (32.50%), Postives = 88/160 (55.00%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV---KDD--HIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSLLALQG 676 +L K+ L+ +V + K+V FAGW MPI + I E + R + LFD+SHM +S+KG + +++KL ++ + G G TV N+ GG IDD +I + ++D + L+VNA ++D I+ ++ ++S + ++ LLALQG Sbjct: 2 DLLKSPLYSKYVESNAKLVNFAGWEMPISFSGLIKEHE-SVRSSAGLFDISHMGVISIKGINPKDYIQKLFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQENDLSELLLIVNASRYEEDFQWIKNNLNM-----SEISITNFKKDKVLLALQG 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_MYCA1 (Aminomethyltransferase OS=Mycobacterium avium (strain 104) GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14 Identity = 51/159 (32.08%), Postives = 76/159 (47.80%), Query Frame = 2 Query: 203 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 S+ +L L D H G F GW MP+ Y ++ E R LFDVSH+ ++G F+ + D+ + PG T+ NE+GG IDD + V DD I+LV NA + A + ++ G VS ++H ++LA+QGP Sbjct: 2 SNEADLLHGPLEDRHRDLGASFAEFGGWLMPVSYAGTVSEHNAT-RNAVGLFDVSHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIFLVPNAA----NTAAVVEALQGAAPAGVTVS-NLHRSYAVLAVQGP 154 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |