FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STRAW (Aminomethyltransferase OS=Streptomyces avermitilis GN=gcvT PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 43/156 (27.56%), Postives = 78/156 (50.00%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER---SLLALQGP 679 + TAL H + G M FAGW MP++Y S + L R LFD+SHM +++ G L ++ ++A + G T+ +GG +DD ++ ++++ +V NA ++ + + + T + G + D+R +L+A+QGP Sbjct: 7 RHTALDALHRSLGATMTDFAGWDMPLRY-GSERDEHLAVRSKAGLFDLSHMGEITVTGPGAAALLNYALVGNIASVGVGRARYTMICRADGGILDDLIVYRLQEQTYLVVANA-------SNAQVVLDALTERAGGFDAVVRDDRDAYALIAVQGP 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PYRAB (Probable aminomethyltransferase OS=Pyrococcus abyssi GN=gcvT PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13 Identity = 48/158 (30.38%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA---HIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 K+ L D+H + K+ FAGW MPI Y SI E L R LFDVSHM + +GKD + FL+ + D++ +G T+ NE G D+++I + ++ ++ ++ +K A +++ ++ FT ++ +D ++ A+QGP A Sbjct: 3 KRVHLFDWHKEHAKKIEEFAGWEMPIWYS-SIKEEHLAVRNAVGLFDVSHMGEIYFRGKDALKFLQYVTTNDISKPPAISGIYTLVLNERGAIKDETLIFNMGNNEYLMICDSDAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYD-IAMFAVQGPKA 158
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PROMP (Aminomethyltransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gcvT PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13 Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKD-----DHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQG 676 +L K+ L+ ++ + K+V FAGW MPI + I E + R + FD+SHM +SL+G + +++K ++ + G G T+ NE GG IDD +I + I+L+VNA D + I+ ++ + + ++ L ALQG Sbjct: 2 DLLKSPLYSKYIESNAKLVNFAGWEMPISFSGLINEHE-SVRTSAGFFDISHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLMLNEKGGIIDDLIIYDLGQQEEDISEIFLIVNASRYQTDFSWIKNNLNTNNISISNAK----KDKVLFALQG 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_NOCFA (Aminomethyltransferase OS=Nocardia farcinica GN=gcvT PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13 Identity = 47/155 (30.32%), Postives = 71/155 (45.81%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 +L + +HD H G F GW MP+ Y ++ E R LFDVSH+ ++ G F+ + D+ + PG T+ + +GG IDD + V DD I+LV NA +A + A A G H + ++ A+QGP Sbjct: 5 DLLRGPVHDLHGELGATFAEFGGWQMPVAYAGTVGEHQA-VRTTVGLFDVSHLGKATVAGPGAAQFVNATLTNDLGRIHPGKAQYTLCCSADGGVIDDLIAYYVADDEIFLVPNAANTAAVVAELAA-----AAPAGVTVTDQHRDYAVFAVQGP 153
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_FRAAA (Aminomethyltransferase OS=Frankia alni (strain ACN14a) GN=gcvT PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12 Identity = 47/158 (29.75%), Postives = 73/158 (46.20%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +L+++ L+ HV G KM F GW MPI+Y ++ R +FDVSH+ + G F+ + D+ +APG T+ N+ GG +DD + + + LV NA + +A + A A G H +LA+QGP A Sbjct: 3 DLRRSPLYGRHVDLGAKMAGFGGWEMPIEYAGRGVLAEHQAVRGAVGIFDVSHLGKAEVTGAGAAEFVNACLSNDLGRIAPGQAQYTLCCNDEGGVVDDLIAYLFSGERVLLVPNAANNAEVVARLAA-----AAPAGVSVTDRHTGFGVLAVQGPAA 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PROM5 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9515) GN=gcvT PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12 Identity = 45/159 (28.30%), Postives = 80/159 (50.31%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV-----KDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQG 676 +L K+ L+ ++ + K++ FAGW MPI + I E + R + FD+SHM +SL+G + +++K ++ + G G T+ NE GG IDD +I + I+L+VNA D I+ ++ + + ++ LL++QG Sbjct: 2 DLLKSPLYSKYIESNAKLINFAGWEMPISFSGLINEHE-SVRTSAGFFDISHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLILNEKGGIIDDLIIYDLGRQEGDISEIFLIVNASRYQDDFLWIKNNLNTNQVSVSNAK----TDKVLLSIQG 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_SYNY3 (Aminomethyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=gcvT PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12 Identity = 47/160 (29.38%), Postives = 76/160 (47.50%), Query Frame = 2 Query: 224 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWH-IHDERSLLALQGPLA 685 +T L++ K+ F GW MP+Q+ + + R+ +FD+SHM L G+ + L+ LV +D+ L PG TV N GG IDD ++ + + L+VNA KD + H+ ++ + + E+ L+ALQGP A Sbjct: 9 RTPLYNLITEQTTKLTTFGGWEMPVQFA-GLKQEHQAVREKVGMFDISHMGKFVLTGQKVLAALQSLVPSDLDRLTPGKAQYTVLLNAQGGIIDDIIVYDQGKNPEGQERVTLIVNAATTVKDKQWLLEHLPE------EIDFQDLSREKVLIALQGPEA 161
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_HALSA (Probable aminomethyltransferase OS=Halobacterium salinarium GN=gcvT PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12 Identity = 46/161 (28.57%), Postives = 74/161 (45.96%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDD---HIYLVVNAG----CRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 L+ + LH H G F GW+MP+ + D I R+ +FDVSHM + + G D +++L DV+ L PG T+++G IDD+V+ + D V NAG D+ H +AH + ++ + ++A+QGP Sbjct: 3 LRTSPLHGRHEDRGASFTEFGGWNMPVDF-DGIQAEHAAVREAAGIFDVSHMGEIEVSGPDAERLMQRLTTNDVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPGAFLFVPNAGHDAAAFDRWTDHRDAHDLDASVD------NVTTDYGMVAVQGP 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_HALS3 (Probable aminomethyltransferase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=gcvT PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12 Identity = 46/161 (28.57%), Postives = 74/161 (45.96%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDD---HIYLVVNAG----CRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 L+ + LH H G F GW+MP+ + D I R+ +FDVSHM + + G D +++L DV+ L PG T+++G IDD+V+ + D V NAG D+ H +AH + ++ + ++A+QGP Sbjct: 3 LRTSPLHGRHEDRGASFTEFGGWNMPVDF-DGIQAEHAAVREAAGIFDVSHMGEIEVSGPDAERLMQRLTTNDVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPGAFLFVPNAGHDAAAFDRWTDHRDAHDLDASVD------NVTTDYGMVAVQGP 156
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CORA7 (Aminomethyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11 Identity = 44/151 (29.14%), Postives = 71/151 (47.02%), Query Frame = 2 Query: 233 LHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 LH H G PF W MP++Y D+ +E R LFD+SHM + + G D FL I+++ L G ++ E+GG IDD + ++++ +V NAG D + + F + S + +++A+QGP A Sbjct: 9 LHAEHEKLGATFTPFGPWEMPLKY-DNELEEHRAVRNAAGLFDLSHMGEIWVNGPDAAEFLSYCFISNLTTLKEGKAKYSMICAEDGGIIDDLITYRLEETKFLVVPNAGNADTVWDALNERAEGFDVDLKNESRDV----AMIAVQGPKA 154 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |