FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BORBR (Aminomethyltransferase OS=Bordetella bronchiseptica GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22 Identity = 64/157 (40.76%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 LK+T L + H+A G +MV F GW MP+ Y S +E RQ+ +FDVSHM + + G D FL +LV DVA LA PG + N GG IDD +I D +VVNAG DKD+A ++ + A G DV+ + +++A+QGP A Sbjct: 5 LKRTPLAEEHLAAGARMVDFGGWDMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNVDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVNAGTADKDIAWMQ---RVAAADGFDVAIAPRRDLAMVAVQGPNA 157
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_XYLFM (Aminomethyltransferase OS=Xylella fastidiosa (strain M12) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 60/157 (38.22%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +KKT L+D H A G KMV F+GW MPI Y I E + R+N +FDVSHM + L G P L +L+ V L PG + N GG IDD ++ +++D+ +VNA R+KDLA I +F + + + ++LA+QGP A Sbjct: 2 IKKTILNDTHRALGAKMVDFSGWEMPIHYGSQIDEHH-HVRRNAGIFDVSHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLIVYYLREDYFRFIVNAATREKDLAWINTQASAFNVRVEE-----RADLAMLAVQGPAA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_XYLFA (Aminomethyltransferase OS=Xylella fastidiosa GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 60/157 (38.22%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +KKT L+D H A G KMV F+GW MPI Y I E + R+N +FDVSHM + L G P L +L+ V L PG + N GG IDD ++ +++D+ +VNA R+KDLA I +F + + + ++LA+QGP A Sbjct: 2 IKKTILNDTHRALGAKMVDFSGWEMPIHYGSQIDEHH-HVRRNAGIFDVSHMTVIDLHGTQVRPLLRRLLANSVDKLKVPGKALYSCMLNPQGGVIDDLIVYYLREDYFRFIVNAATREKDLAWINTQASAFNVRVEE-----RADLAMLAVQGPAA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_THET8 (Aminomethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 60/156 (38.46%), Postives = 90/156 (57.69%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +KKT L++ H+ G +MV FAG+ +P+QY SI+E L R+ +FDVSHM ++GK+ + FL+ D L G ++ NE GG +DD + ++ ++ +VVNA KDLAH++A K F + D S + +LLALQGP A Sbjct: 1 MKKTPLYEAHLRLGARMVDFAGYLLPLQYT-SIVEEHLAVRRAVGVFDVSHMGEFLVRGKEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKDLAHLQALAKGFRVELEDAS----ERTALLALQGPKA 151
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAES (Aminomethyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 +LKKT L+ +V +G K+V F GW+MP+Q+ SI E R N LFDVSHM + + GKD F++ ++ D L + N+ GG IDD V K+ ++H L+VNA +KD I+ H +FT DVS + D+ LA+QGP Sbjct: 4 DLKKTPLYQNYVDSGAKIVEFGGWAMPVQFS-SIKEEHNAVRYNVGLFDVSHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNDEGGIIDDLVTYKLNENHYLLIVNAANTNKDYQWIKKHSSNFTV---DVS-NTSDKYGQLAIQGP 153
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAEQ (Aminomethyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 215 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 +LKKT L+ +V +G K+V F GW+MP+Q+ SI E R N LFDVSHM + + GKD F++ ++ D L + N+ GG IDD V K+ ++H L+VNA +KD I+ H +FT DVS + D+ LA+QGP Sbjct: 4 DLKKTPLYQNYVDSGAKIVEFGGWAMPVQFS-SIKEEHNAVRYNVGLFDVSHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNDEGGIIDDLVTYKLNENHYLLIVNAANTNKDYQWIKKHSSNFTV---DVS-NTSDKYGQLAIQGP 153
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAAW (Aminomethyltransferase OS=Staphylococcus aureus (strain MW2) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS ++ LA+QGP A Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAAT (Aminomethyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS ++ LA+QGP A Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAAS (Aminomethyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS ++ LA+QGP A Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAAR (Aminomethyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21 Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS ++ LA+QGP A Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |