FC868701

Overview
NameFC868701
Unique NameFC868701
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: PABA_SALTY (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Salmonella typhimurium GN=pabA PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28
Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFT+NL QY  ELG   +V RND LT+  +   NP+ ++ISPGP TP D+GISL  +      +P+ GVC+G Q M +AFG  +VR+   VMHGK+S V ++ +   G+  GL +P T  RYHS
Sbjct:    2 ILLIDNYDSFTWNLYQYFCELGAEVQVRRNDALTLAHIDALNPQKIVISPGPCTPNDAGISLAVIRHYAGRIPMLGVCLGHQAMAQAFGASVVRA-AKVMHGKTSPVTHNGQ---GVFRGLPSPLTVTRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_AZOBR (Anthranilate synthase component 2 OS=Azospirillum brasilense GN=trpG PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28
Identity = 64/133 (48.12%), Postives = 86/133 (64.66%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTV-LELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +++IDNYDSFTYNL  Y+GELG   +V RND LTVEE     P G+++SPGP  P  +GI L  +       VPL GVC+G Q +G+ FGG +VR+P+  MHGK   +++  +   G+L  L +PF A RYHS
Sbjct:    2 LLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAGICLPLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPV-PMHGKVDRMFHQGR---GVLKDLPSPFRATRYHS 130          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: PABA_SERMA (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Serratia marcescens GN=pabA PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27
Identity = 62/132 (46.97%), Postives = 89/132 (67.42%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +++IDNYDSFTYNL QY  ELG    V RNDEL + +++R  P+ ++ISPGP TP ++GIS+  +      +P+ GVC+G Q +G+AFG ++VR+   VMHGK+S + +      G+  GLS+P T  RYHS
Sbjct:    2 LLLIDNYDSFTYNLYQYFCELGAEVVVKRNDELQLTDIERLAPQHLVISPGPCTPNEAGISVAAIRHFAGKLPILGVCLGHQALGQAFGAEVVRA-RAVMHGKTSAIRHLGV---GVFRGLSDPLTVTRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_METJA (Anthranilate synthase component II OS=Methanocaldococcus jannaschii GN=trpG PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27
Identity = 60/132 (45.45%), Postives = 94/132 (71.21%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++VIDN DSF +NL QY+G LGY  ++  N ++T++E+K+ NP  ++ISPGP TP+++G  ++ + E+   +P+ GVC+G QC+ EAFGG++ R+   VMHGK+SL+ +D    +G+   + NPF  GRYHS
Sbjct:    6 VLVIDNIDSFVWNLVQYVGTLGYKVKLVDN-KITLDEIKKINPDRIIISPGPKTPKEAGNCIKIIQEV--DIPILGVCLGHQCIVEAFGGEVGRAK-RVMHGKASLINHD---GEGIFKDIPNPFYGGRYHS 130          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: PABA_KLEAE (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Klebsiella aerogenes GN=pabA PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26
Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFT+NL QY  ELG    V RNDELT+ ++    P  ++ISPGP TP +SGISL  +       P+ GVC+G Q + + FG  IVR+   VMHGK+S V +  +   G+  GL+NP T  RYHS
Sbjct:    2 ILLIDNYDSFTWNLYQYFCELGAEVLVRRNDELTLADIISLAPAKIVISPGPCTPDESGISLAAIRHFSGQTPILGVCLGHQAIAQVFGAAIVRA-AKVMHGKTSPVSHTGQ---GVFLGLNNPLTVTRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_SULSO (Anthranilate synthase component II OS=Sulfolobus solfataricus GN=trpG PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 61/134 (45.52%), Postives = 84/134 (62.69%), Query Frame = 1
Query:  316 IVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTP---QDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++IDNYDSF YN+ Q +GELG +  V RNDE++++ ++R +P  ++ISPGPGTP   +D G+SL  +  LG   P+ GVC+G Q +G AFG KI R    V HGK S +         L  G++  F A RYHS
Sbjct:    5 LIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRIIISPGPGTPEKREDIGVSLDVIKYLGKRTPILGVCLGHQAIGYAFGAKI-RRARKVFHGKISNIILVNNSPLSLYYGIAKEFKATRYHS 137          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_PENCH (Anthranilate synthase component 2 OS=Penicillium chrysogenum GN=trpC PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +I+IDNYDSFT+N+ QY+   G    VYRNDE+TVE+L  K P  ++ISPGPG P  D+GIS   +      VP+FGVCMG QCM  +FGGK+  +   ++HGK+S + +D K   G+  GL       RYHS
Sbjct:   24 VILIDNYDSFTWNIYQYLVLEGATVTVYRNDEVTVEDLVAKKPTQLVISPGPGHPDTDAGISNAVIKHFSGKVPIFGVCMGQQCMITSFGGKVDVTG-EILHGKTSELKHDSK---GVYQGLPTSLEVTRYHS 152          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_MYCTU (Anthranilate synthase component 2 OS=Mycobacterium tuberculosis GN=trpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 65/135 (48.15%), Postives = 88/135 (65.19%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDE--LTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPT-VPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+V+DNYDSF +NL QY+G+LG   EV+RND+  L+ E        GVL+SPGPGTP+ +G S+  V        PL GVC+G Q +G AFG  + R+P  ++HGK+S V++      G+L GL +PFTA RYHS
Sbjct:    3 ILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAGQFDGVLLSPGPGTPERAGASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAP-ELLHGKTSSVFHTNV---GVLQGLPDPFTATRYHS 133          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_NEUCR (Anthranilate synthase component 2 OS=Neurospora crassa GN=trp-1 PE=4 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26
Identity = 61/133 (45.86%), Postives = 86/133 (64.66%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTP-QDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +I+IDNYDSFT+N+ QY+   G    V+RND++T++EL  KNP  ++ISPGPG P  DSGIS   +      +P+FGVCMG QC+ + +GG +  +   ++HGK+S + +D K   G  AGLS      RYHS
Sbjct:   26 LILIDNYDSFTWNVYQYLVLEGAKVTVFRNDQITIDELIAKNPTQLVISPGPGHPGTDSGISRDAIRHFAGKIPIFGVCMGQQCIFDVYGGDVCFAG-EILHGKTSPLRHDGK---GAYAGLSQDLPVTRYHS 154          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_PICAN (Anthranilate synthase component 2 (Fragment) OS=Pichia angusta PE=4 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.123e-25
Identity = 58/133 (43.61%), Postives = 87/133 (65.41%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +++IDNYDSFT+NL +Y+ + G + EV+RND++T+ E+++  P  V+ISPGPG P+ DSGIS   +      +P+FGVCMG QC+ E FGG +  +   ++HGK+S V +D K   G+   +       RYHS
Sbjct:    8 VVMIDNYDSFTWNLYEYLCQEGANVEVFRNDQITIPEIEQLKPDVVVISPGPGHPRTDSGISRDVISHFKGKIPVFGVCMGQQCIFEEFGGDVEYAG-EIVHGKTSTVKHDNK---GMFKNVPQDVAVTRYHS 136          
The following BLAST results are available for this feature:
BLAST of FC868701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
PABA_SALTY2.051e-2848.48Para-aminobenzoate synthase glutamine amidotransfe... [more]
TRPG_AZOBR3.499e-2848.12Anthranilate synthase component 2 OS=Azospirillum ... [more]
PABA_SERMA1.018e-2746.97Para-aminobenzoate synthase glutamine amidotransfe... [more]
TRPG_METJA2.962e-2745.45Anthranilate synthase component II OS=Methanocaldo... [more]
PABA_KLEAE1.125e-2648.48Para-aminobenzoate synthase glutamine amidotransfe... [more]
TRPG_SULSO5.586e-2645.52Anthranilate synthase component II OS=Sulfolobus s... [more]
TRPG_PENCH5.586e-2648.12Anthranilate synthase component 2 OS=Penicillium c... [more]
TRPG_MYCTU5.586e-2648.15Anthranilate synthase component 2 OS=Mycobacterium... [more]
TRPG_NEUCR9.528e-2645.86Anthranilate synthase component 2 OS=Neurospora cr... [more]
TRPG_PICAN2.123e-2543.61Anthranilate synthase component 2 (Fragment) OS=Pi... [more]

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Properties
Property NameValue
Genbank descriptionC31003F10EF AbioticL1 Citrus clementina cDNA clone C31003F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868701 ID=FC868701; Name=FC868701; organism=Citrus clementina; type=EST; length=708bp
TTTTTGTTGTCTTTTCAGTTAAAAGCGCCTTAGTTTCATATTCTCAGTCT
CGCTCTCTCCTCTCTAGCAACAATGGCGGCAATGGTTTCGCAGTCAACTC
TCATTCAAACAAAACCGTCTCTCTCTTTAAAACCCTCTCAACGGTTTCGA
CCCAATCGTCTCTCTGCAATCCCTGAGCCTTCTCCAGGGCTGAGGTTGGG
GGCTAAGAAGGGAAATGGGGCTGTAAAGTTGTCAATGGCTGTGGCAGAGG
CAGTACCCATTTCGAAGTCTTTATATTTGGATGATAAGAAGAGCAAGAAT
AATAAAAATCCCATCATTGTTATTGATAATTATGATAGTTTCACTTACAA
TCTCTGCCAGTATATGGGCGAGCTTGGTTATCACTTTGAGGTTTATCGGA
ATGATGAATTAACTGTGGAGGAGTTAAAACGGAAAAATCCTAGAGGAGTG
CTTATATCCCCTGGGCCAGGCACACCTCAAGATTCTGGAATATCATTGCA
GACTGTTTTGGAACTTGGACCTACTGTGCCTCTGTTTGGTGTTTGTATGG
GTTTGCAGTGCATGGGAGAGGCTTTTGGAGGGAAGATTGTGCGTTCTCCT
CTTGGTGTCATGCATGGAAAAAGTTCTCTTGTGTATTATGATGAGAAAGG
GGAGGATGGCTTGCTTGCTGGACTATCAAATCCTTTCACAGCAGGTAGAT
ATCATAGC
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