FC868701

Overview
NameFC868701
Unique NameFC868701
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_METTM (Anthranilate synthase component II OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpG PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 57/140 (40.71%), Postives = 82/140 (58.57%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFE-----VYRNDELTVEELKRKNPRGVLISPGPGTP---QDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFT+NL Q  GE+    +     V RNDE+ ++ ++  +P  ++ISPGPG P   +D GI  + + E     P+ GVC+G Q +   FGG +       +HGK S V++D  G + L  G+ NPF A RYHS
Sbjct:    5 ILIIDNYDSFTHNLYQMAGEIMMEMDSADIMVVRNDEVDIDYVRGLDPERIIISPGPGNPIKREDFGICSEVIGEFTDR-PILGVCLGHQGIFHYFGGVVGYGE--PVHGKISEVFHD--GSE-LFRGVPNPFRATRYHS 138          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_HALSA (Anthranilate synthase component II OS=Halobacterium salinarium GN=trpG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18
Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMG-----ELGYHFEVYRNDELTVEELKRKNPRGVLISPGPG---TPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++V+DNYDSFTYNL +Y+      +      V +N   ++  ++  +P  V+ISPGPG   TP+D G++   +  + P VP  GVC+G++     +GG + R+    MHGK++ V +D   E G+ A +   F A RYHS
Sbjct:    3 VVVVDNYDSFTYNLVEYLSAQPRDDHAPDVTVLKNTA-SLAAVRAADPDAVVISPGPGHPDTPRDVGVTTDVLRAVSPRVPTLGVCLGMEAAVHEYGGTVGRA-AEPMHGKTTPVSHD---ETGIFADIQQDFPAARYHS 137          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_VIBCH (Anthranilate synthase component II OS=Vibrio cholerae GN=trpG PE=4 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRN----DELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+ IDN+DSFTYNL      LG+   +YRN    D +    L+  NP  V++SPGPG P ++G   + +  L   VP+ G+C+G Q + EA+GG +V     ++HGK S++   E     +  GL +P    RYHS
Sbjct:    4 ILFIDNFDSFTYNLVDQFRSLGHVVTIYRNNLSADAIEQALLQLDNPV-VVLSPGPGAPSETGCMPELLQRLKGKVPMIGICLGHQAIVEAYGG-VVAGAGEIIHGKVSMM---EHQNHAIYRGLPSPLAIARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_SALTY (Anthranilate synthase component II OS=Salmonella typhimurium GN=trpD PE=1 SV=4)

HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18
Identity = 45/135 (33.33%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++DN DSFT+NL   +   G++  +YRN    +  ++ L       +++SPGPG P ++G   + +  L   +P+ G+C+G Q + EA+GG + ++   ++HGK+S + +D +    + AGL+NP    RYHS
Sbjct:    4 ILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG-EILHGKASSIEHDGQ---AMFAGLANPLPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_HELPJ (Anthranilate synthase component II OS=Helicobacter pylori J99 GN=trpG PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18
Identity = 52/136 (38.24%), Postives = 75/136 (55.15%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND--ELTVEELKRKNPRGVL--ISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I  IDN+DSF+YNL   +  LGY   VY+ND     +  L  + P+  L  ISPGPG P  SG  L+ +       P+ GVC+GLQ + +++G KI+RS   ++HGK++ +      +  +  GL      GRYHS
Sbjct:    3 IFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMGLMNEEPKTPLLFISPGPGNPNSSGNLLKIIAMAKKKFPILGVCLGLQALAQSYGAKIIRSK-EIVHGKATTIALK---KHAVFKGLGESMVVGRYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_BUCBP (Anthranilate synthase component 2 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trpG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18
Identity = 47/135 (34.81%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++DN DSFTYNL   +    +   VYRN     + +++L +     +++SPGPG P ++G   Q ++EL   +P+ G+C+G Q + + +GG +  S   ++HG++SL+ +D K    +  G+SNP    RYHS
Sbjct:    4 ILLLDNIDSFTYNLVDQLRSNFHQVFVYRNTVRKNIILKKLSKMINPILILSPGPGNPDNAGCMPQLLMELKGKLPIIGICLGHQAIVKMYGGHVGYSG-EILHGQASLINHDNK---AMFLGMSNPLPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_VIBPA (Anthranilate synthase component II OS=Vibrio parahaemolyticus GN=trpG PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17
Identity = 51/138 (36.96%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND------ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+ IDN+DSFTYNL      LG+  ++YRN       E  + EL+  NP  VL+SPGPG P ++G   + +  +   VP+ G+C+G Q + EA+GG +  +   ++HGK S++   E  +  +   L +P    RYHS
Sbjct:    4 IVFIDNFDSFTYNLVDQFRSLGHSVKIYRNHIPAETIEQAINELE--NPV-VLLSPGPGAPSEAGSMPELIQRMKGKVPMIGICLGHQAIVEAYGGTVAGAG-EIIHGKVSMM---EHQDHAIYQNLPSPLAIARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_HELPY (Anthranilate synthase component II OS=Helicobacter pylori GN=trpG PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17
Identity = 52/139 (37.41%), Postives = 75/139 (53.96%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND-------ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I  IDN+DSF+YNL   +  LGY   VY+ND       +L  EE K      + ISPGPG P  SG  L+ +       P+ G+C+GLQ + +++G KI+RS   ++HGK++ +      +  +  GL      GRYHS
Sbjct:    3 IFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPL---LFISPGPGNPNSSGNLLKIIAMAKKKFPILGICLGLQALAQSYGAKIIRSK-EIVHGKATAIALK---KHAVFKGLGESMVVGRYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_CRYNE (Anthranilate synthase component 2 OS=Cryptococcus neoformans GN=TRP1 PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17
Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  316 IVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRG----VLISPGPGTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++IDNYDSFT+N+   +  +G +  V RND++T++E++     G    ++ISPGPG P+ DSG+S   +      +P+ GVCMGL+C+ +  GG+I  +   + HGK+SLV +D     G+   L    ++ RYHS
Sbjct:    5 LLIDNYDSFTWNIYADLASVGGNPYVVRNDKITLKEIEGMFSDGELERIVISPGPGHPRTDSGVSRDVIAWGMGKLPILGVCMGLECIVDLLGGEIAYAG-EIKHGKTSLVQHD---SIGVFHNLPQFLSSTRYHS 136          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_ARCFU (Anthranilate synthase component 2 OS=Archaeoglobus fulgidus GN=trpG PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17
Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNP-RGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+V+D  DSF YNL +Y+      F+  R  E     L RK    GV+ISPGPG P  S   L+ V ++G  VP+ GVC+G Q + E FGGK+ R  +  +HGK+SLV +D +   G+  G+ NP  AGRYHS
Sbjct:    2 IVVVDCKDSFVYNLVEYISL----FDKVRVVEKESAGLLRKMSFDGVVISPGPGKPDRS---LEFVFKMG--VPVLGVCLGHQMIAEVFGGKVGR--VEPVHGKTSLVEHDGR---GIFKGVRNPLRAGRYHS 120          
The following BLAST results are available for this feature:
BLAST of FC868701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
TRPG_METTM2.513e-1840.71Anthranilate synthase component II OS=Methanobacte... [more]
TRPG_HALSA7.312e-1836.43Anthranilate synthase component II OS=Halobacteriu... [more]
TRPG_VIBCH9.550e-1838.24Anthranilate synthase component II OS=Vibrio chole... [more]
TRPG_SALTY9.550e-1833.33Anthranilate synthase component II OS=Salmonella t... [more]
TRPG_HELPJ9.550e-1838.24Anthranilate synthase component II OS=Helicobacter... [more]
TRPG_BUCBP9.550e-1834.81Anthranilate synthase component 2 OS=Buchnera aphi... [more]
TRPG_VIBPA1.247e-1736.96Anthranilate synthase component II OS=Vibrio parah... [more]
TRPG_HELPY1.247e-1737.41Anthranilate synthase component II OS=Helicobacter... [more]
TRPG_CRYNE2.127e-1738.24Anthranilate synthase component 2 OS=Cryptococcus ... [more]
TRPG_ARCFU2.127e-1744.36Anthranilate synthase component 2 OS=Archaeoglobus... [more]

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Properties
Property NameValue
Genbank descriptionC31003F10EF AbioticL1 Citrus clementina cDNA clone C31003F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868701 ID=FC868701; Name=FC868701; organism=Citrus clementina; type=EST; length=708bp
TTTTTGTTGTCTTTTCAGTTAAAAGCGCCTTAGTTTCATATTCTCAGTCT
CGCTCTCTCCTCTCTAGCAACAATGGCGGCAATGGTTTCGCAGTCAACTC
TCATTCAAACAAAACCGTCTCTCTCTTTAAAACCCTCTCAACGGTTTCGA
CCCAATCGTCTCTCTGCAATCCCTGAGCCTTCTCCAGGGCTGAGGTTGGG
GGCTAAGAAGGGAAATGGGGCTGTAAAGTTGTCAATGGCTGTGGCAGAGG
CAGTACCCATTTCGAAGTCTTTATATTTGGATGATAAGAAGAGCAAGAAT
AATAAAAATCCCATCATTGTTATTGATAATTATGATAGTTTCACTTACAA
TCTCTGCCAGTATATGGGCGAGCTTGGTTATCACTTTGAGGTTTATCGGA
ATGATGAATTAACTGTGGAGGAGTTAAAACGGAAAAATCCTAGAGGAGTG
CTTATATCCCCTGGGCCAGGCACACCTCAAGATTCTGGAATATCATTGCA
GACTGTTTTGGAACTTGGACCTACTGTGCCTCTGTTTGGTGTTTGTATGG
GTTTGCAGTGCATGGGAGAGGCTTTTGGAGGGAAGATTGTGCGTTCTCCT
CTTGGTGTCATGCATGGAAAAAGTTCTCTTGTGTATTATGATGAGAAAGG
GGAGGATGGCTTGCTTGCTGGACTATCAAATCCTTTCACAGCAGGTAGAT
ATCATAGC
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