FC868703

Overview
NameFC868703
Unique NameFC868703
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27
Identity = 66/168 (39.29%), Postives = 97/168 (57.74%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I+G +VDA+S +TF   +P   EV+A VAE  A D++RAV +A +   +  W  +T  ER+RIM RA DL+ +  +ELA LET + GKP  ++   ++     +L YYAG A  I G  +P   +  + T  EP+GV   I  WN+P+ +  WK APAL   + +  K
Sbjct:   11 IHGAYVDASSNQTFESINPANGEVLAEVAEAGAADLERAVESAEQG--QRIWAALTGIERARIMRRAVDLLRERNDELALLETLDTGKPLSETRSVDIITGADVLEYYAGLAPAIEGEQIPLRDSSFVYTRREPLGVVAGIGAWNYPIQIALWKAAPALAAGNAMIFK 176          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH_MYCTU (Probable aldehyde dehydrogenase OS=Mycobacterium tuberculosis GN=Rv0458 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27
Identity = 67/171 (39.18%), Postives = 91/171 (53.22%), Query Frame = 3
Query:  213 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            +N I GQ+V    G+ F    P T +    V   DA DID+A+  A  A     W K  P ER+ I+   AD I+KN   LA  E W+NGKP  ++L +++P+ V    Y+A       G     D +      HEP+GV GQI+PWNFP+L+  WK+APAL   +T  LK
Sbjct:   21 QNFIGGQWVAPVHGRYFENPTPVTGQPFCEVPRSDAADIDKALDAAHAAAPG--WGKTAPAERAAILNMIADRIDKNAAALAVAEVWDNGKPVREALAADIPLAVDHFRYFAAAIRAQEGALSQIDEDTVAYHFHEPLGVVGQIIPWNFPILMAAWKLAPALAAGNTAVLK 189          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH_MYCBO (Probable aldehyde dehydrogenase OS=Mycobacterium bovis GN=Mb0467 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27
Identity = 67/171 (39.18%), Postives = 91/171 (53.22%), Query Frame = 3
Query:  213 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            +N I GQ+V    G+ F    P T +    V   DA DID+A+  A  A     W K  P ER+ I+   AD I+KN   LA  E W+NGKP  ++L +++P+ V    Y+A       G     D +      HEP+GV GQI+PWNFP+L+  WK+APAL   +T  LK
Sbjct:   21 QNFIGGQWVAPVHGRYFENPTPVTGQPFCEVPRSDAADIDKALDAAHAAAPG--WGKTAPAERAAILNMIADRIDKNAAALAVAEVWDNGKPVREALAADIPLAVDHFRYFAAAIRAQEGALSQIDEDTVAYHFHEPLGVVGQIIPWNFPILMAAWKLAPALAAGNTAVLK 189          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ABDH_SHIF8 (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=ydcW PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27
Identity = 67/172 (38.95%), Postives = 100/172 (58.14%), Query Frame = 3
Query:  213 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL   + + LK
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEVSAEQVDAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLK 172          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27
Identity = 66/171 (38.60%), Postives = 94/171 (54.97%), Query Frame = 3
Query:  213 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            K  ING +VD+  GKTF   +P   EV+A +    AED++RAVA+A  A  +  W  MT   RSRI+ RA D++ +  +ELAALET + GK   ++   ++     +L YYAG    I G  +P      + T  EP+GV   I  WN+P+ +  WK APAL   + +  K
Sbjct:    8 KLYINGAYVDSTDGKTFNAVNPANGEVLAEIQSASAEDVNRAVASA--ASGQKVWAAMTAMARSRILRRAVDILRERNDELAALETLDTGKAMSETTAVDIVTGADVLEYYAGLIPSIEGQQIPLRDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFK 176          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDB_ECOLI (Aldehyde dehydrogenase B OS=Escherichia coli (strain K12) GN=aldB PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27
Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = 3
Query:  216 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            N I G++V  A G+ +    P T +++  VA     DID A+  A K  D+  W   +  +R+ I+ + AD +E+N+E LA  ETW+NGKP  ++  ++VP+ +    Y+A       G     D        HEP+GV GQI+PWNFPLL+ +WK+APAL   + + LK
Sbjct:   27 NFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSGKRDIDLALDAAHKVKDK--WAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLK 194          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ABDH_ENT38 (Gamma-aminobutyraldehyde dehydrogenase OS=Enterobacter sp. (strain 638) GN=Ent638_2124 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27
Identity = 66/170 (38.82%), Postives = 98/170 (57.65%), Query Frame = 3
Query:  219 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            LING+ V+   G+  PVY+P T EV+  +AE  A  +D AV  A +AF E  W   TP  R+  +L+ AD+IE++ E  A LE+ N GKP    +  E+P VV +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL   + + +K
Sbjct:    6 LINGELVNG-EGEKQPVYNPATGEVLLEIAEASAAQVDAAVRAADRAFSE--WGHTTPKARAECLLKLADVIEEHAETFARLESQNCGKPLHCVISDEIPAVVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIK 172          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ABDH_ECOUT (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27
Identity = 66/172 (38.37%), Postives = 100/172 (58.14%), Query Frame = 3
Query:  213 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            K LING+ V +  G+  PVY+P T +V+  +AE  AE ++ AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL   + + LK
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLK 172          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ABDH_ECOL6 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O6 GN=ydcW PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27
Identity = 66/172 (38.37%), Postives = 100/172 (58.14%), Query Frame = 3
Query:  213 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            K LING+ V +  G+  PVY+P T +V+  +AE  AE ++ AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL   + + LK
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLK 172          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ABDH_ECOL5 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27
Identity = 66/172 (38.37%), Postives = 100/172 (58.14%), Query Frame = 3
Query:  213 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            K LING+ V +  G+  PVY+P T +V+  +AE  AE ++ AV  A  AF E  W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++GL        H   +  +P+GV   I PWN+PL++  WK+APAL   + + LK
Sbjct:    4 KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAE--WGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLK 172          
The following BLAST results are available for this feature:
BLAST of FC868703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 369
Match NameE-valueIdentityDescription
BETB_PSEU51.055e-2739.29Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
ALDH_MYCTU1.055e-2739.18Probable aldehyde dehydrogenase OS=Mycobacterium t... [more]
ALDH_MYCBO1.055e-2739.18Probable aldehyde dehydrogenase OS=Mycobacterium b... [more]
ABDH_SHIF81.055e-2738.95Gamma-aminobutyraldehyde dehydrogenase OS=Shigella... [more]
BETB_SERP51.378e-2738.60Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
ALDB_ECOLI1.378e-2737.06Aldehyde dehydrogenase B OS=Escherichia coli (stra... [more]
ABDH_ENT381.378e-2738.82Gamma-aminobutyraldehyde dehydrogenase OS=Enteroba... [more]
ABDH_ECOUT1.799e-2738.37Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOL61.799e-2738.37Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOL51.799e-2738.37Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionC31003F12EF AbioticL1 Citrus clementina cDNA clone C31003F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868703 ID=FC868703; Name=FC868703; organism=Citrus clementina; type=EST; length=729bp
GGGAGAAGAGTTGAATAGGTCGCCTCTTCGCTTTGGCTATGGCAGCTGCT
CGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTC
TCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCA
GGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAA
ATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATC
AGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTA
ATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCT
CGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAG
GTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGG
AGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCT
CTCAAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGG
ATGGGCTGATAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACC
ATATTCAAACTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCC
TGGAACTTTCCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAAC
TTTGTGGCATACTATTGNTCTAAAGTCTG
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