FC868703

Overview
NameFC868703
Unique NameFC868703
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALD1_STAAC (Putative aldehyde dehydrogenase SACOL2114 OS=Staphylococcus aureus (strain COL) GN=SACOL2114 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 3
Query:  207 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQ-------TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            YTK  ING++V++ S +T  V +P T EVI  VA+G+  D+D+AV  A   + E  +   +  ER  ++ +     E   +++    T   G P   SL   V   + L H+ A   D +         NY  +        + E IGV+G I PWNFP    + K+A A      + LK
Sbjct:    4 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPL--SLSERVHYQMGLNHFVAA-RDAL--------DNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLK 170          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALD1_STAA8 (Putative aldehyde dehydrogenase SAOUHSC_02363 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02363 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 3
Query:  207 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQ-------TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            YTK  ING++V++ S +T  V +P T EVI  VA+G+  D+D+AV  A   + E  +   +  ER  ++ +     E   +++    T   G P   SL   V   + L H+ A   D +         NY  +        + E IGV+G I PWNFP    + K+A A      + LK
Sbjct:    4 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPL--SLSERVHYQMGLNHFVAA-RDAL--------DNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLK 170          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALD1_STAA3 (Putative aldehyde dehydrogenase SAUSA300_2076 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2076 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 3
Query:  207 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQ-------TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            YTK  ING++V++ S +T  V +P T EVI  VA+G+  D+D+AV  A   + E  +   +  ER  ++ +     E   +++    T   G P   SL   V   + L H+ A   D +         NY  +        + E IGV+G I PWNFP    + K+A A      + LK
Sbjct:    4 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPL--SLSERVHYQMGLNHFVAA-RDAL--------DNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLK 170          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ROCA_STAS1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 43/170 (25.29%), Postives = 82/170 (48.24%), Query Frame = 3
Query:  219 LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            +ING+  +  +  T+   +P  T EVIA V++   +D+D A   A +A+    W + +  +R+  ++R A +I +  EE++A+  +  GKP+ +++      +  + +Y     +   G  V      H +  ++PIG    I PWNFP  +        +   +T+ LK
Sbjct:   40 VINGE--EKFTKDTYQSINPANTTEVIAEVSKATQKDVDDAFEAANEAYKS--WKRWSHKDRAEFLIRVAAIIRRRKEEISAVMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMELADGKPVLDREGEHNKYFYKPIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: LADH_METVS (Lactaldehyde dehydrogenase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0796 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 46/152 (30.26%), Postives = 77/152 (50.66%), Query Frame = 3
Query:  267 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXL 722
            + +P T E+I  +   D E+   A+  A +  D     ++ P +R  ++++ A+ I    +  A   + + GKP  QS + EV   +      A +A ++ G T+P + N  I T  EP+GV G I P+NFPL L T K+ PA+   + + L
Sbjct:   15 ILNPYTLEIIERITALDREETKYAIEVATENKDV--MKELNPSKRYSLLMKIAEHISSKKDLFANTISVDVGKPIKQS-RIEVDRTITAFRLSALYAKELRGETIPSE-NEIIFTKKEPVGVVGAITPFNFPLNLITHKIGPAIATGNAVVL 162          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: LADH_METMP (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis GN=MMP1487 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 3
Query:  267 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXL 722
            V+DP T E I  +   D E+   A+    K   +     ++P +R +I+++ A+ +    +  A   + + GKP  QS K EV   +  L   A +A ++ G T+  + N  I T  EP+GV G I P+NFPL L T K+ PA+   +++ L
Sbjct:   15 VFDPYTLENIEKITALDREETKNAIEVTEK--HKEIMKNLSPSKRYKILMKVAEHLSSKKDFFAKTISIDVGKPIKQS-KIEVDRTLTALKLSAFYAKELRGETINSE-NGLIFTKKEPLGVIGAITPFNFPLNLATHKIGPAIATGNSVVL 162          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: PUTA_SALTY (Bifunctional protein putA OS=Salmonella typhimurium GN=putA PE=2 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  246 ASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            A G+  PV +P    +++    E    ++++A+   + A ++ P W    P ER+ I+ RAA L+E  M++L  L     GK +  ++ +EV   V  LHYYAG              ++  +T H P+G    I PWNFPL +FT ++A AL   +++  K
Sbjct:  656 ADGEMTPVINPAEPKDIVGWGREATESEVEQAL---QNAVNQAPVWFATPPQERAAILQRAAVLMEDQMQQLIGLLVREAGKTFSNAI-AEVREAVDFLHYYAGQVRD----------DFDNET-HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAK 802          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: MMSA_DROPS (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA14712 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 48/173 (27.75%), Postives = 86/173 (49.71%), Query Frame = 3
Query:  210 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            TK  I+G+FV++ + +   V+DP T +V+  V +   +++  A+ + +KAF    W   +   R  +M +   LI++NM ELA   T   GK    + + +V   ++++ +         G TV     +    +L  P+GV   I P+NFP ++  W    A+T  +T+ LK
Sbjct:   26 TKLFIDGKFVESKTKEWIDVHDPATNKVVTRVPKATQDEMQTALESNKKAFRS--WSNQSILTRQAVMFKLQALIKENMGELAKNITKEQGKTLADA-EGDVLRGLQVVEHCCSIPSLQMGETVANVARDMDTYSLVMPLGVTAGIAPFNFPAMIPLWMFPVAITTGNTMLLK 195          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: MMSA_DROME (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila melanogaster GN=CG17896 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 47/173 (27.17%), Postives = 86/173 (49.71%), Query Frame = 3
Query:  210 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            TK  I+G+FV++ + +   V+DP T +V+  V +    ++  A+ + +KAF    W   +   R ++M +   LI++NM ELA   T   GK    + + +V   ++++ +         G TV     +    +L  P+GV   + P+NFP ++  W    A+T  +T+ LK
Sbjct:   26 TKLFIDGKFVESKTNEWIDVHDPATNQVVTRVPKATQAEMQAALESNKKAFRS--WSNQSILTRQQVMFKLQALIKENMGELAKNITKEQGKTLADA-EGDVLRGLQVVEHCCSIPSLQMGETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTMLLK 195          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: GABD_DEIRA (Succinate-semialdehyde dehydrogenase [NADP+] OS=Deinococcus radiodurans GN=ssdA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11
Identity = 49/158 (31.01%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  255 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            + F   +P T E +      ++ +I   +  A +A+ E  W +    ER+ IM RAA+L+ +  +ELA+L T   GK  ++  K EV +   +L+YY       +   T+P         LH P+GV   I PWN+PL       AP L + +T+ LK
Sbjct:   13 RPFATVNPYTGETVKTFPFLESAEIPALIERADQAYRE--WGQRPVTERAAIMRRAAELMLERTDELASLITLEMGK-LLREAKGEVALAASILNYYGEQGPSFLEPKTIPVPQG-EAAVLHAPLGVLLGIEPWNYPLYQVVRFAAPNLVVGNTVLLK 166          
The following BLAST results are available for this feature:
BLAST of FC868703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 369
Match NameE-valueIdentityDescription
ALD1_STAAC8.115e-1230.56Putative aldehyde dehydrogenase SACOL2114 OS=Staph... [more]
ALD1_STAA88.115e-1230.56Putative aldehyde dehydrogenase SAOUHSC_02363 OS=S... [more]
ALD1_STAA38.115e-1230.56Putative aldehyde dehydrogenase SAUSA300_2076 OS=S... [more]
ROCA_STAS11.060e-1125.291-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
LADH_METVS1.060e-1130.26Lactaldehyde dehydrogenase OS=Methanococcus vannie... [more]
LADH_METMP1.060e-1131.58Lactaldehyde dehydrogenase OS=Methanococcus maripa... [more]
PUTA_SALTY1.384e-1130.86Bifunctional protein putA OS=Salmonella typhimuriu... [more]
MMSA_DROPS1.384e-1127.75Probable methylmalonate-semialdehyde dehydrogenase... [more]
MMSA_DROME1.384e-1127.17Probable methylmalonate-semialdehyde dehydrogenase... [more]
GABD_DEIRA2.361e-1131.01Succinate-semialdehyde dehydrogenase [NADP+] OS=De... [more]

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Properties
Property NameValue
Genbank descriptionC31003F12EF AbioticL1 Citrus clementina cDNA clone C31003F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868703 ID=FC868703; Name=FC868703; organism=Citrus clementina; type=EST; length=729bp
GGGAGAAGAGTTGAATAGGTCGCCTCTTCGCTTTGGCTATGGCAGCTGCT
CGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTC
TCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCA
GGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAA
ATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATC
AGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTA
ATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCT
CGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAG
GTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGG
AGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCT
CTCAAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGG
ATGGGCTGATAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACC
ATATTCAAACTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCC
TGGAACTTTCCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAAC
TTTGTGGCATACTATTGNTCTAAAGTCTG
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