FC868703

Overview
NameFC868703
Unique NameFC868703
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: XYLC_PSEPU (Benzaldehyde dehydrogenase [NAD+] OS=Pseudomonas putida GN=xylC PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 53/164 (32.32%), Postives = 76/164 (46.34%), Query Frame = 3
Query:  246 ASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL----TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            A G    V DP   +++      + ED+D AV  A++A  E  W  +   ER+ I+ +AA+ +++   E A       G    + L  E  +    +H  AG A   +G      VPG  N   +    P+GV G I PWNFPL L    VAPAL L + + LK
Sbjct:   22 ARGGVANVVDPSNGDILGITGVANGEDVDAAVNAAKRAQKE--WAAIPFSERAAIVRKAAEKLKEREYEFADWNVRECGAIRPKGLW-EAGIAYEQMHQAAGLASLPNGTLFPSAVPGRMNLCQRV---PVGVVGVIAPWNFPLFLAMRSVAPALALGNAVILK 179          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: PUTA_KLEAE (Bifunctional protein putA OS=Klebsiella aerogenes GN=putA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = 3
Query:  246 ASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            A G+  PV +P    +++  V E    ++ +A+ +A    +  P W    P ER+ I+ RAA L+E  M  L  +     GK +  ++ +EV   V  LHYYAG              ++  +T H P+G    I PWNFPL +FT ++A AL   +++  K
Sbjct:  656 AEGEMQPVVNPAEPKDIVGYVREASDAEVQQALTSA---INNAPIWFATPPQERAAILERAAVLMESQMPTLMGILVREAGKTFSNAI-AEVREAVDFLHYYAGQVRD----------DFDNET-HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAK 802          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: LADH_METM7 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0731 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 3
Query:  267 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXL 722
            V+DP T + I  +   D E+   A+    K  ++     ++P +R  I+++ A+ I    +  A   + + GKP  QS K EV   +      A +A ++ G T+  + N  I T  EP+GV G I P+NFPL L T K+ PA+   +++ L
Sbjct:   15 VFDPYTLKNIEKITALDREETKNAIEITEK--NKEVMKNLSPSKRYSILMKIAEQISLKKDLFAKTISIDVGKPIKQS-KIEVDRTLTAFRLSAFYAKELRGETINSE-NGLIFTKKEPLGVVGAITPFNFPLNLITHKIGPAIATGNSVIL 162          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALD1_STAHJ (Putative aldehyde dehydrogenase SH0913 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0913 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 47/174 (27.01%), Postives = 79/174 (45.40%), Query Frame = 3
Query:  204 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            +YT+  ING+++D+ S +T  V +P T EVI  VA+G++ D+++AV  A   + E  +   +  ER  ++ +  +  +   +++    T   G P   S      M +      +   D        GD         E IGV+G + PWNFP    + K+A A      + LK
Sbjct:    3 NYTQQYINGEWIDSDSNETIEVINPATEEVIGKVAKGNSNDVEKAVEAANNVYLE--FRHSSVKERKELLDKIVEEYKNRKQDIIEAITDELGAPLTLSENVHYQMGLNHFEEASRALDSFEFEERRGDA----LVTKEAIGVSGLVTPWNFPTNQTSLKLAAAFAAGSPVVLK 170          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: A16A1_BOVIN (Aldehyde dehydrogenase family 16 member A1 OS=Bos taurus GN=ALDH16A1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 46/165 (27.88%), Postives = 76/165 (46.06%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTI 716
            +NGQ++      + P  DP T E +A+  +  +ED+  AV  AR + +   W       R++ + R A +I+K+   L  LE+   G+   +    +VP+  +LL Y+A          V            EP+GV G I+   FP L   W++ PAL +  T+
Sbjct:   44 VNGQWLKPEHRSSVPCQDPITGENLASCLQAQSEDVAAAVEAARASLEN--WSTQPGAIRAQHLTRLAKVIQKHQRLLWTLESLVTGRAVREVRDRDVPLAQQLLQYHA----------VQAHTQEEALAGWEPMGVIGLILSPTFPFLDMMWRICPALAVGCTV 196          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ASTD_VIBHB (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=astD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G++V    G+ F    P   EVI       AE +++AV+ AR+AF +  W K    ER  I+L  A+ +++N E++A +     GKP  ++      M  ++      + D+    T    GN  I   H P+GV     P+NFP  L    + PAL   +T+  K
Sbjct:    5 IAGEWVQG-QGEAFTSLSPYNQEVIWQGNGATAEQVNQAVSAAREAFVD--WKKRPFAEREAIVLAFAEKVKENSEKIAEVIAKETGKPIWETRTEAAAMAGKIAISIRAYHDRTGEATREAAGN-QIVLRHRPLGVMAVFGPYNFPGHLPNGHIVPALLAGNTVVFK 168          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ROCA_GEOTN (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rocA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 52/173 (30.06%), Postives = 83/173 (47.98%), Query Frame = 3
Query:  219 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH-GLTV---PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            +I G+ V     K   V     AEVI  VA+ + E  +RA+ TA +AF    W + +P  R+ I+ RAA ++ +   E +A      GKP+ ++  ++    +  + YY     K+  G+ V   PG+ N   +  + P+GV   I PWNFP  +       AL   +T+ LK
Sbjct:   40 IIGGERV-MTEDKITSVNPANKAEVIGRVAKANKELAERAMKTADEAFRT--WSRTSPEARADILFRAAAIVRRRKHEFSAWLVKEAGKPWREA-DADTAEAIDFMEYYGRQMLKLKDGIPVESRPGETN---RFFYIPLGVGVVISPWNFPFAIMAGTTVAALVTGNTVLLK 205          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: IOLA1_BACLD (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 45/171 (26.32%), Postives = 82/171 (47.95%), Query Frame = 3
Query:  216 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            N I+G++V++   ++  V +P    VIA        D+DRAV  A+ A+    W  +    R+R++ +   L+++  E+LA + T  NGK  ++  + EV   + ++         + G ++P   G         P+GV   I P+NFP+++  W    A+   +T  LK
Sbjct:   11 NHIDGEWVNSLGAESEEVVNPANGNVIAYAPLSVRADVDRAVQAAKHAYQ--TWSLVPVPNRARLLYKYLQLLQEQKEQLADIITTENGKT-LKDARGEVQRGIEVVELATATPTLMMGESLPAIAGGIDGSIWRYPLGVVAGITPFNFPMMVPLWMFPLAIACGNTFVLK 178          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALD1_STAS1 (Putative aldehyde dehydrogenase SSP0762 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0762 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 52/177 (29.38%), Postives = 84/177 (47.46%), Query Frame = 3
Query:  204 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            ++TK  ING++V++ SG+T  V +P T EV   +A+G+ ED+++AV  A   + E  +   +  ER  ++ +     +   E+L    T   G P   S+   V   + L H+ A   D ++        GD       + E IGV+G I PWNFP    + K+A A      +  K
Sbjct:    3 NFTKQYINGEWVESTSGETLEVINPATEEVAGTIAKGNKEDVEKAVEAADNVYLE--FRHTSVKERQDLLDQIVQEYKNRKEDLIQAITDELGAPL--SVAENVHYQMGLDHFEAA-RDALNDFQFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVFK 170          
The following BLAST results are available for this feature:
BLAST of FC868703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 369
Match NameE-valueIdentityDescription
XYLC_PSEPU3.084e-1132.32Benzaldehyde dehydrogenase [NAD+] OS=Pseudomonas p... [more]
PUTA_KLEAE4.027e-1130.86Bifunctional protein putA OS=Klebsiella aerogenes ... [more]
LADH_METM74.027e-1130.92Lactaldehyde dehydrogenase OS=Methanococcus maripa... [more]
ALD1_STAHJ4.027e-1127.01Putative aldehyde dehydrogenase SH0913 OS=Staphylo... [more]
A16A1_BOVIN4.027e-1127.88Aldehyde dehydrogenase family 16 member A1 OS=Bos ... [more]
ASTD_VIBHB5.260e-1129.76N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ROCA_GEOTN6.869e-1130.061-pyrroline-5-carboxylate dehydrogenase OS=Geobaci... [more]
IOLA1_BACLD6.869e-1126.32Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALD1_STAS18.972e-1129.38Putative aldehyde dehydrogenase SSP0762 OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionC31003F12EF AbioticL1 Citrus clementina cDNA clone C31003F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868703 ID=FC868703; Name=FC868703; organism=Citrus clementina; type=EST; length=729bp
GGGAGAAGAGTTGAATAGGTCGCCTCTTCGCTTTGGCTATGGCAGCTGCT
CGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTC
TCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCA
GGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAA
ATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATC
AGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTA
ATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCT
CGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAG
GTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGG
AGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCT
CTCAAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGG
ATGGGCTGATAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACC
ATATTCAAACTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCC
TGGAACTTTCCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAAC
TTTGTGGCATACTATTGNTCTAAAGTCTG
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