FC868703

Overview
NameFC868703
Unique NameFC868703
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 80/178 (44.94%), Postives = 113/178 (63.48%), Query Frame = 3
Query:  195 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            ++I +TK  IN ++ ++ SGKTFPV++P T E I  V E D ED+D+AV  AR+AF  G PW  M   ER +++ + ADLIE++   LA LE+ N GK +  +   ++   ++ L Y AGWADKI G T+P DG +   T HEPIGV G I PWN P++L   K+ PAL   +T+ +K
Sbjct:   16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVK 193          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 84/194 (43.30%), Postives = 123/194 (63.40%), Query Frame = 3
Query:  147 SRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            +++ +AA +  PI P   I   +  I+ ++ DA S KTFP   P T EVI +VAEGD  D+D A   AR AF  G PW  M   +R  ++   ADL+E++   LA+LE+ +NGKP+ +S   ++  V+++  Y+AGWADK HG T+P DG +   T HEP+GV  QI+PWNFPL++ +WK+A AL + +T+  K
Sbjct:   11 TQYFSAAALPSPI-PNPDIPDNQLFISNKWHDAVSKKTFPTVSPATGEVIGHVAEGDWADVDLAAKAARAAFRLGSPWRWMDALKRGWLLNHLADLVERDCVYLASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCCQIIPWNFPLVMQSWKLALALAMGNTVVTK 203          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.962e-39
Identity = 88/189 (46.56%), Postives = 120/189 (63.49%), Query Frame = 3
Query:  162 AAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE-RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            A +    + P V     K LING+FV A SGKTF V +P   +VIANVAE +  D+D AV  AR AF+     +MT  + R  +MLR AD++EKN +E+AALE+ +NGKPY  +L  +V + V    Y AG ADK++G   P  GN+      +PIGV GQI+PWNFPLL+  +K++PAL + +T+ LK
Sbjct:    4 ATLARLEMAPKVTHIQEKLLINGKFVPAVSGKTFEVVNPADEKVIANVAEAEKADVDLAVKAARHAFESF---RMTDCQWRRNLMLRLADILEKNSKEMAALESLDNGKPYEVALNVDVALSVECFRYCAGLADKVNGTVPPRSGNFLGIVKRQPIGVCGQIIPWNFPLLMAAFKLSPALAMGNTVVLK 189          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.865e-38
Identity = 76/172 (44.19%), Postives = 108/172 (62.79%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            INGQF+DA  GKT+   +P     I  V+     DIDRAVA A++AF+ G W KM P +R RI+ R AD++E++ EELA +E+ ++G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EPIGV G ++PWN+PL++  WK A  L   +T+ LK
Sbjct:  426 INGQFIDAEGGKTYDTVNPTDGTAICKVSLAQVSDIDRAVAAAKEAFENGEWGKMNPRDRGRILYRLADIMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTFTRREPIGVCGIVIPWNYPLMMLAWKTAACLAAGNTVVLK 597          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.592e-38
Identity = 76/172 (44.19%), Postives = 109/172 (63.37%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            INGQF+DA  GK++   +P     I  V+     DIDRAVA A++AF+ G W KM P +R R++ R ADL+E++ EELA +E+ ++G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EPIGV G ++PWN+PL++  WK A  LT  +T+ LK
Sbjct:  426 INGQFMDAEGGKSYDTINPTDGTAICKVSLAQISDIDRAVAAAKEAFENGEWGKMNPRDRGRLLYRLADLMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGRTIPINQARPNRNLTFTRREPIGVCGIVIPWNYPLMMLAWKTAACLTAGNTVVLK 597          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: CROM_OMMSL (Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.918e-37
Identity = 77/185 (41.62%), Postives = 117/185 (63.24%), Query Frame = 3
Query:  186 IPPV----QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            IPP     +I + K  IN QFV++ S K +PVY+P   E +  V EGD  DID+AV   + AF  G PW +M       ++ R ADL+E+++  +A+LET + GKPY  S +  V  + ++L Y+AGWADK  G ++P DG++   T +EP+GV G ++P+N+P+L+ TWK+APAL   + + +K
Sbjct:    4 IPPPTRNPEIKHNKIFINNQFVNSTSNKAYPVYNPCDNEKVCEVQEGDKSDIDKAVQACKAAFKRGTPWRRMDASRLGHLLYRLADLMERDIAYMASLETMDTGKPYKNSYQDMVHCI-QVLRYFAGWADKNMGESIPVDGDFFCYTRNEPVGVCGLLIPYNYPMLMMTWKMAPALACGNCMIVK 187          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.505e-37
Identity = 80/185 (43.24%), Postives = 112/185 (60.54%), Query Frame = 3
Query:  183 IIPPVQISYTKNL---INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLKS 728
            I  P  + Y + L   I+G+FV  A GKTF   +P   + I  V E   +D+D AVA ARKAF EG W ++TP  R R++ + ADL E++ E LA++E  +NGK    +   ++      L YY GWADKIHG T+  +      T HEPIGV GQI+PWNFPLL++ WK+ PA+   +T+ +K+
Sbjct:    8 ITTPNGVKYEQPLGLFIDGEFVKGAEGKTFETINPSNEKPIVAVHEATEKDVDTAVAAARKAF-EGSWRQVTPSTRGRMLTKLADLFERDAEILASIEALDNGKSITMA-HGDIAGAAGCLRYYGGWADKIHGQTIDTNSETLNYTRHEPIGVCGQIIPWNFPLLMWAWKIGPAIATGNTVVIKT 190          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.288e-37
Identity = 84/195 (43.08%), Postives = 112/195 (57.44%), Query Frame = 3
Query:  156 STAAVVEEPIIPPVQISYTKNL---INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD-EGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLKS 728
            ST  V    I  P   +Y + +   IN Q VD+  G    VY P T ++I  VA+ D ED+D AV  AR AF  + PW K +  +R R + R AD IE+N+E LA++ET +NGK  +   + +V        YY GWADK +G T+  D      T HEPIGV GQI+PWNFP L+  WK+APA+   +TI LK+
Sbjct:    2 STKLVDHVEITVPTGKTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKS-ITLARGDVQAAADCFRYYGGWADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKT 195          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.243e-36
Identity = 77/181 (42.54%), Postives = 109/181 (60.22%), Query Frame = 3
Query:  195 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            V+I Y +  INGQFVDA  G+T+   +P     I  V+     D+DRAVA A+ AF+ G W +M   +R R+M R ADL+E+N EELA +E  ++G  Y  +LK+ + M V+   Y+AGW DKI G T+P      NY++  T  EP+G    I+PWN+PL++  WK A  L   +T+ LK
Sbjct:  439 VKIPY-QCFINGQFVDAEDGETYATVNPTDGTTICRVSHASLADVDRAVAAAKDAFENGEWGRMNARDRGRLMYRLADLMEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNYNLTFTKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLK 618          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 81/172 (47.09%), Postives = 106/172 (61.63%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL---TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLKS 728
            IN +FV    GKTF V +P    VI  V E   +D+D AVA ARKAF EG W + TP  R +++   A+L EKN++ LAA+E+ +NGK  +   K ++ M V  L YY GWADKI G    T P   NY      EPIGV GQI+PWNFPLL++ WK+ PA+   +T+ LK+
Sbjct:   22 INNEFVKGQEGKTFDVINPSDESVITQVHEATEKDVDIAVAAARKAF-EGSWRQETPENRGKLLNNLANLFEKNIDLLAAVESLDNGKA-ISMAKGDISMCVGCLRYYGGWADKITGKVIDTTPDTFNY---VKKEPIGVCGQIIPWNFPLLMWAWKIGPAIACGNTVVLKT 188          
The following BLAST results are available for this feature:
BLAST of FC868703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 369
Match NameE-valueIdentityDescription
ALDH1_ELEED1.569e-3944.94Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
AL1B1_BOVIN1.569e-3943.30Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
ALDH2_LEITA5.962e-3946.56Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
FTHFD_XENTR3.865e-3844.1910-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
FTHFD_XENLA6.592e-3844.1910-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
CROM_OMMSL1.918e-3741.62Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3[more]
ALDH_ASPNG2.505e-3743.24Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
YF19_SCHPO7.288e-3743.08Putative aldehyde dehydrogenase-like protein C9E9.... [more]
AL1L2_MOUSE1.243e-3642.54Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
ALDH_CLAHE6.170e-3647.09Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]

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Properties
Property NameValue
Genbank descriptionC31003F12EF AbioticL1 Citrus clementina cDNA clone C31003F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868703 ID=FC868703; Name=FC868703; organism=Citrus clementina; type=EST; length=729bp
GGGAGAAGAGTTGAATAGGTCGCCTCTTCGCTTTGGCTATGGCAGCTGCT
CGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTC
TCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCA
GGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAA
ATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATC
AGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTA
ATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCT
CGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAG
GTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGG
AGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCT
CTCAAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGG
ATGGGCTGATAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACC
ATATTCAAACTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCC
TGGAACTTTCCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAAC
TTTGTGGCATACTATTGNTCTAAAGTCTG
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