FC868703

Overview
NameFC868703
Unique NameFC868703
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 8.058e-36
Identity = 74/172 (43.02%), Postives = 103/172 (59.88%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            INGQF DA  GKT+   +P     I  V+     D+D+AVA A+ AF+ G W +M   ER R+M R ADL+E+N EELA +E  ++G  Y  +LK+ + M V+   Y+AGW DKI G T+P      N ++  T  EP+GV   I+PWN+PL++  WK A  L   +T+ LK
Sbjct:  447 INGQFTDADDGKTYDTINPTDGSTICKVSYASLADVDKAVAAAKDAFENGEWGRMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNRNLTFTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLK 618          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 5.223e-35
Identity = 80/199 (40.20%), Postives = 118/199 (59.30%), Query Frame = 3
Query:  138 RGISRFSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            R + R  + A +  PI  P   +Y   T   ING+FV +   KTF V +P   E I  V +   +D+D AVA A+KAF E  W  + P  R++ +   ADL+EK+ E LAA+E+ +NGK    + + +V +V + L    GWADKI+G  +    N+   ++ EP+GV GQI+PWNFPLL+++WK+ PAL   +T+ LK
Sbjct:   17 RSLLRLYSQAPLRVPITLPNGFTYEQPTGLFINGEFVASKQKKTFDVINPSNEEKITTVYKAMEDDVDEAVAAAKKAF-ETKWSIVEPEVRAKALFNLADLVEKHQETLAAIESMDNGKSLFCA-RGDVALVSKYLRSCGGWADKIYGNVIDTGKNHFTYSIKEPLGVCGQIIPWNFPLLMWSWKIGPALATGNTVVLK 213          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.223e-35
Identity = 80/199 (40.20%), Postives = 118/199 (59.30%), Query Frame = 3
Query:  138 RGISRFSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            R + R  + A +  PI  P   +Y   T   ING+FV +   KTF V +P   E I  V +   +D+D AVA A+KAF E  W  + P  R++ +   ADL+EK+ E LAA+E+ +NGK    + + +V +V + L    GWADKI+G  +    N+   ++ EP+GV GQI+PWNFPLL+++WK+ PAL   +T+ LK
Sbjct:   17 RSLLRLYSQAPLRVPITLPNGFTYEQPTGLFINGEFVASKQKKTFDVINPSNEEKITTVYKAMEDDVDEAVAAAKKAF-ETKWSIVEPEVRAKALFNLADLVEKHQETLAAIESMDNGKSLFCA-RGDVALVSKYLRSCGGWADKIYGNVIDTGKNHFTYSIKEPLGVCGQIIPWNFPLLMWSWKIGPALATGNTVVLK 213          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 69/172 (40.12%), Postives = 105/172 (61.05%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +R R++ R ADL+E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G ++PWN+PL++ +WK A  L   +T+ +K
Sbjct:  426 IGGEFVDAEGAKTYSTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 597          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: FTHFD_PONAB (10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.592e-34
Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A+ AF+ G W K++  +R R++ R ADL+E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G I+PWN+PL++ +WK A  L   +T+ +K
Sbjct:  426 IGGEFVDAEGAKTYETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIK 597          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: FTHFD_RAT (10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.386e-34
Identity = 68/172 (39.53%), Postives = 105/172 (61.05%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G ++PWN+PL++ +WK A  L   +T+ +K
Sbjct:  426 IGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDRGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 597          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: FTHFD_HUMAN (10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.422e-34
Identity = 71/172 (41.28%), Postives = 104/172 (60.47%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G+FVDA   KT    +P    VI  V+     D+D+AVA A+ AF+ G W K++  +R R+M R ADL+E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G I+PWN+PL++ +WK A  L   +T+ +K
Sbjct:  426 IGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIK 597          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH4_YEAST (Potassium-activated aldehyde dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=ALD4 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.422e-34
Identity = 74/186 (39.78%), Postives = 113/186 (60.75%), Query Frame = 3
Query:  180 PIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLKS 728
            PI  P  + Y   T   IN +FV +   KTF V +P T E I ++ EG  +D++ AV  A +AF  G W  + P +R + + R A+LIE++ + +A++ET +NGK  + S + +V +V+  L   AG+ADKI G  +     +   T  +P+GV GQI+PWNFPLL++ WK+APAL   +T+ LK+
Sbjct:   32 PIKLPNGLEYEQPTGLFINNKFVPSKQNKTFEVINPSTEEEICHIYEGREDDVEEAVQAADRAFSNGSWNGIDPIDRGKALYRLAELIEQDKDVIASIETLDNGKA-ISSSRGDVDLVINYLKSSAGFADKIDGRMIDTGRTHFSYTKRQPLGVCGQIIPWNFPLLMWAWKIAPALVTGNTVVLKT 216          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: PUUC_ECOLI (Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=puuC PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33
Identity = 69/168 (41.07%), Postives = 100/168 (59.52%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            ING++  AA  +TF   DP T   +A +A G + DIDRA++ AR  F+ G W   +P +R  ++ + ADL+E + EELA LET + GKP   SL+ ++P   R + +YA   DK++G       +     + EP+GV   IVPWNFPLLL  WK+ PAL   +++ LK
Sbjct:   24 INGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILK 191          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33
Identity = 73/168 (43.45%), Postives = 101/168 (60.12%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+AR+   E  W  MT  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL   + +  K
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQRE--WAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFK 176          
The following BLAST results are available for this feature:
BLAST of FC868703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 369
Match NameE-valueIdentityDescription
AL1L2_HUMAN8.058e-3643.02Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
ALDH5_YEAST5.223e-3540.20Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAS75.223e-3540.20Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
FTHFD_MOUSE1.985e-3440.1210-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
FTHFD_PONAB2.592e-3440.7010-formyltetrahydrofolate dehydrogenase OS=Pongo a... [more]
FTHFD_RAT3.386e-3439.5310-formyltetrahydrofolate dehydrogenase OS=Rattus ... [more]
FTHFD_HUMAN4.422e-3441.2810-formyltetrahydrofolate dehydrogenase OS=Homo sa... [more]
ALDH4_YEAST4.422e-3439.78Potassium-activated aldehyde dehydrogenase, mitoch... [more]
PUUC_ECOLI2.195e-3341.07Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen... [more]
BETB_BURCM6.385e-3343.45Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]

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Properties
Property NameValue
Genbank descriptionC31003F12EF AbioticL1 Citrus clementina cDNA clone C31003F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868703 ID=FC868703; Name=FC868703; organism=Citrus clementina; type=EST; length=729bp
GGGAGAAGAGTTGAATAGGTCGCCTCTTCGCTTTGGCTATGGCAGCTGCT
CGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTC
TCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCA
GGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAA
ATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATC
AGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTA
ATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCT
CGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAG
GTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGG
AGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCT
CTCAAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGG
ATGGGCTGATAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACC
ATATTCAAACTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCC
TGGAACTTTCCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAAC
TTTGTGGCATACTATTGNTCTAAAGTCTG
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