FC868703

Overview
NameFC868703
Unique NameFC868703
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_BURMS (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=betB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL   + +  K
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFK 176          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_BURMA (Betaine aldehyde dehydrogenase OS=Burkholderia mallei GN=betB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL   + +  K
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFK 176          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_BURM9 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=betB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL   + +  K
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFK 176          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_BURM7 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=betB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL   + +  K
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFK 176          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_BURP6 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=betB PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 68/168 (40.48%), Postives = 95/168 (56.55%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +    LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL   + +  K
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNNALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFK 176          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  222 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            I G++V A  G TF V +P T EV+ANV    A+D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +  + LA LET N GKP  ++   +V     +L YYAG A  + G  VP        T HEP+GV G I  WN+P+ +  WK APAL   + +  K
Sbjct:   11 IGGRYVPARGGHTFEVVNPATGEVLANVHNAGADDLDAAVDSAQAG--QRQWAALTTVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDVVTGADVLEYYAGVAQALQGAQVPLREGSFFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFK 176          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH_DEIRA (Aldehyde dehydrogenase OS=Deinococcus radiodurans GN=aldA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  216 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            N I GQ+V    G+ F    P   +V    A   AED++ A+  A +A     W + +  ERS I+L+ AD +E+N+E LA  ETW+NGKP  ++L +++P+ +    Y+AG      G     D +      HEP+GV GQI+PWNFPLL+  WK+APAL   + + LK
Sbjct:   31 NFIGGQWVPPVKGQYFDNASPVDGKVFTQAARSTAEDVELALDAAHRAAPA--WGRTSVTERSNILLKIADRMEQNLEMLAVAETWDNGKPVRETLAADLPLAIDHFRYFAGCIRAQEGGLSQIDDSTVAYHFHEPLGVVGQIIPWNFPLLMGVWKLAPALAAGNAVVLK 198          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28
Identity = 67/170 (39.41%), Postives = 94/170 (55.29%), Query Frame = 3
Query:  216 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            N I GQ++   SG+ F    P    V   VA   ++D++ A+  A  A +   W   +  ERS I+LR AD IE N+E LA +E+W+NGKP  ++L +++P+ +    Y+A       G     D       L EPIGV GQI+PWNFPLL+  WK+APAL    T+ LK
Sbjct:   21 NYIGGQWMKPHSGEYFSNTSPVNGLVFCRVARSSSQDVELALDAAHNALES--WSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHFRYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLK 188          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28
Identity = 67/170 (39.41%), Postives = 94/170 (55.29%), Query Frame = 3
Query:  216 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            N I GQ++   SG+ F    P    V   VA   ++D++ A+  A  A +   W   +  ERS I+LR AD IE N+E LA +E+W+NGKP  ++L +++P+ +    Y+A       G     D       L EPIGV GQI+PWNFPLL+  WK+APAL    T+ LK
Sbjct:   21 NYIGGQWMKPHSGEYFSNTSPVNGLVFCRVARSSSQDVELALDAAHNALES--WSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHFRYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLK 188          
BLAST of FC868703 vs. ExPASy Swiss-Prot
Match: ABDH_SERP5 (Gamma-aminobutyraldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=Spro_3642 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28
Identity = 72/173 (41.62%), Postives = 99/173 (57.23%), Query Frame = 3
Query:  219 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNY---HIQTL-HEPIGVAGQIVPWNFPLLLFTWKVAPALTLWHTIXLK 725
            LINGQ V    G   PVY+P T EV+  VAE  AE +D+AV  A  AF+   W + TP ER+  +L+ ADLI+ + E  A LE+ N GKPY   L  E+P V  +  ++AG +  + GL     G Y   H   +  +P+GV   I PWN+PL++  WK+APAL   + + LK
Sbjct:    6 LINGQLV-TGQGALLPVYNPATGEVVVQVAEASAEQVDQAVLAADAAFEH--WGQTTPKERAEHLLKLADLIDSHAETFARLESINCGKPYHCVLNDELPGVADVFRFFAGASRCLSGLAA---GEYLAGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLK 172          
The following BLAST results are available for this feature:
BLAST of FC868703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 369
Match NameE-valueIdentityDescription
BETB_BURMS3.279e-2940.48Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURMA3.279e-2940.48Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM93.279e-2940.48Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM73.279e-2940.48Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURP65.594e-2940.48Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_XANC57.305e-2941.07Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
ALDH_DEIRA7.305e-2938.82Aldehyde dehydrogenase OS=Deinococcus radiodurans ... [more]
ALDH_VIBCH1.246e-2839.41Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]
ALDH_VIBC31.246e-2839.41Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
ABDH_SERP51.246e-2841.62Gamma-aminobutyraldehyde dehydrogenase OS=Serratia... [more]

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Properties
Property NameValue
Genbank descriptionC31003F12EF AbioticL1 Citrus clementina cDNA clone C31003F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868703 ID=FC868703; Name=FC868703; organism=Citrus clementina; type=EST; length=729bp
GGGAGAAGAGTTGAATAGGTCGCCTCTTCGCTTTGGCTATGGCAGCTGCT
CGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCTTCTCCTTC
TCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCA
GGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAA
ATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATC
AGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTA
ATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCT
CGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAG
GTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGG
AGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCT
CTCAAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGG
ATGGGCTGATAAAATCCACGGACTAACTGTCCCTGGTGATGGAAATTACC
ATATTCAAACTTTACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCC
TGGAACTTTCCTCTTCTCTTGTTTACTTGGAAAGTAGCGCCTGCACTAAC
TTTGTGGCATACTATTGNTCTAAAGTCTG
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