FC868711

Overview
NameFC868711
Unique NameFC868711
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.568e-15
Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 2
Query:  368 SKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVN-GKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718
            S   R +L+ V+G   PG  +A++GPSGSGK+TLLN +AG+L  S   +L+G + +N GK +     +  +V Q+DL +  LTVRETL   A L+LP  L+ + +     S++ +LGL
Sbjct:   77 STEERTILSGVTGMISPGEFMAVLGPSGSGKSTLLNAVAGRLHGS---NLTGKILINDGKITKQTLKRTGFVAQDDLLYPHLTVRETLVFVALLRLPRSLTRDVKLRAAESVISELGL 191          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.047e-15
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 2
Query:  326 IRWQNITC--SLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718
            + WQ++T   ++ D  +++V   L  ++G A+PG L A+MGPSGSGK+T+L+ LA +L A+    LSG + +NG+ +       AYV Q+D     LTVRET+  +A ++LP+ +   E+   V   + ++GL
Sbjct:   50 LTWQDLTVMVTMGDGETQNV---LEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAAN--AFLSGTVLLNGRKTKLSFGTAAYVTQDDNLIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGL 177          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 2
Query:  362 KSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718
            K  K  + +L N++G  + G + AIMGPSG+GKTTLL++LA +L     ++ SG + +NG  S    +K    YV Q D     LTVRETL+  A+L++P  + ++E+ + V  ++ ++GL
Sbjct:  130 KKKKISKQILTNINGHIESGTIFAIMGPSGAGKTTLLDILAHRL----NINGSGTMYLNGNKSDFNIFKKLCGYVTQSDSLMPSLTVRETLNFYAQLKMPRDVPLKEKLQRVQDIIDEMGL 246          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = 2
Query:  380 RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718
            + +L  ++G   PG +LA+MGPSGSGKTTLL ++ G+L      ++ G L  N  P S +   +  +V Q+D+   QLTV ETL+ AA L+LP  +S E++   +  ++ +LGL
Sbjct:  104 KHILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTD----NVKGKLTYNDIPYSPSVKRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMIIKELGL 213          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB24G_ARATH (ABC transporter G family member 24 OS=Arabidopsis thaliana GN=ABCG24 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 50/133 (37.59%), Postives = 78/133 (58.65%), Query Frame = 2
Query:  326 IRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718
            + ++++T +L     + +R     V+G  KPGR+ A+MGPSG+GKT+LL+ LAG+ +      LSGL+ +NGK  S  +YK    +V Q+D+    LTV E L   A+ +LP  LS  ++   V  ++  LGL
Sbjct:  477 LSFKDLTLTLKSNGKQVLRC----VTGSMKPGRITAVMGPSGAGKTSLLSALAGKAVG---CKLSGLILINGKQESIHSYKKIIGFVPQDDVVHGNLTVEENLWFHAKCRLPADLSKADKVLVVERIIDSLGL 602          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: YN99_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YNR070W OS=Saccharomyces cerevisiae GN=YNR070W PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 50/152 (32.89%), Postives = 90/152 (59.21%), Query Frame = 2
Query:  254 ERNDVAEANGDG-EAPVDGKVFPVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703
            +  ++A +N D   A  +G        W+N++ ++   S +  R LL++VSG   PG L A++G SG+GKTTLLN LA + + +    ++G + V+G P  ++   +  YV+Q+DL  ++LTV+E+L  +A ++ P+ +   E+ EYV  ++
Sbjct:  704 DMKEIASSNDDSTSADFEGLESTGVFIWKNVSFTIPHSSGQ--RKLLDSVSGYCVPGTLTALIGESGAGKTTLLNTLAQRNVGT----ITGDMLVDGLPMDASFKRRTGYVQQQDLHVAELTVKESLQFSARMRRPQSIPDAEKMEYVEKII 849          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 2
Query:  371 KSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAY--KFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGLV 721
            K  + L+ NV G A PG LLA+MG SG+GKTTLLN LA +     ++  S +  +NG P   K    + AYV+Q+DLF   LT RE L   A +++P  ++ +++ + V+ ++  L L+
Sbjct:   96 KPRKHLIKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSARGVQISPSSVRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQATVRMPRTMTQKQKLQRVDQVIQDLSLI 214          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCGL_DICDI (ABC transporter G family member 21 OS=Dictyostelium discoideum GN=abcG21 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 2
Query:  245 DDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703
            +++++ +   AN   +     K+      WQNI  ++  K  K  R LL+NV G  KPG++ A+MG SG+GKTTLL+VLA +        + G   +NGKP      +   YV Q D+    LTVRE L  +A+L+    +S+EE+ +YV  +L
Sbjct:  791 EEEKKQNQIVANATSKMKDTLKMRGGIFTWQNINYTVPVKGGK--RLLLDNVEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTMG---EVQGKCFLNGKPLEIDFERITGYVEQMDVHNPGLTVREALRFSAKLRQEPSVSLEEKFDYVEHVL 939          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: PDR5_YEAST (Pleiotropic ABC efflux transporter of multiple drugs OS=Saccharomyces cerevisiae GN=PDR5 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 2
Query:  332 WQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNK-AYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703
            W+N+   +  K+    R +LNNV G  KPG L A+MG SG+GKTTLL+ LA ++       ++G + VNG P          Y +Q+DL     TVRE+L  +A L+ P  +S+EE++ YV  ++
Sbjct:  871 WRNLCYEVQIKAE--TRRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERVTMGV---ITGDILVNGIPRDKSFPRSIGYCQQQDLHLKTATVRESLRFSAYLRQPAEVSIEEKNRYVEEVI 990          
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: PDR12_YEAST (ATP-dependent permease PDR12 OS=Saccharomyces cerevisiae GN=PDR12 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 50/118 (42.37%), Postives = 75/118 (63.56%), Query Frame = 2
Query:  374 SVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP---SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718
            + R LL++V G  KPG++ A+MG SG+GKTTLLNVLA ++       ++G + VN KP   S N++    YV Q D   ++L+VRE+L  AAEL+    + +EE+ EYV  ++  LG+
Sbjct:  856 ATRKLLSDVFGYVKPGKMTALMGESGAGKTTLLNVLAQRINMGV---ITGDMLVNAKPLPASFNRS--CGYVAQADNHMAELSVRESLRFAAELRQQSSVPLEEKYEYVEKIITLLGM 968          
The following BLAST results are available for this feature:
BLAST of FC868711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
AB25G_ARATH1.568e-1540.68ABC transporter G family member 25 OS=Arabidopsis ... [more]
AB11G_ARATH2.047e-1536.84ABC transporter G family member 11 OS=Arabidopsis ... [more]
ABCG1_DICDI3.492e-1538.02ABC transporter G family member 1 OS=Dictyostelium... [more]
AB26G_ARATH3.492e-1539.47ABC transporter G family member 26 OS=Arabidopsis ... [more]
AB24G_ARATH4.561e-1537.59ABC transporter G family member 24 OS=Arabidopsis ... [more]
YN99_YEAST5.957e-1532.89Uncharacterized ABC transporter ATP-binding protei... [more]
WHITE_LUCCU5.957e-1538.66Protein white OS=Lucilia cuprina GN=W PE=2 SV=2[more]
ABCGL_DICDI5.957e-1535.71ABC transporter G family member 21 OS=Dictyosteliu... [more]
PDR5_YEAST1.016e-1438.40Pleiotropic ABC efflux transporter of multiple dru... [more]
PDR12_YEAST1.016e-1442.37ATP-dependent permease PDR12 OS=Saccharomyces cere... [more]

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Properties
Property NameValue
Genbank descriptionC31003G11EF AbioticL1 Citrus clementina cDNA clone C31003G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868711 ID=FC868711; Name=FC868711; organism=Citrus clementina; type=EST; length=725bp
GCTACTCCAGTTGCACTGCTGCAACGGAGGCTAAGCAACAAGAAGATAAA
GTTAAAATTAAATTTTATAAATAAAAAAGACAAAAATGGTGAATTTTGGA
GGGAATAAGGTGGGCCAAGTGGTGGCAGGAATTGGCGGGAACGGCGTAGG
CCAGGTACTGGCAGCCGTTGCCGTCTCTCTTTTGTTCCGCTTGTTTACTG
GACCTGGTCCGGCATTGGTAACAGATGACGACTCTGCCTATGGTGACGAC
GATGAAAGAAACGACGTCGCAGAAGCTAATGGTGACGGTGAAGCTCCGGT
TGACGGCAAAGTCTTCCCGGTCACCATCCGTTGGCAAAACATCACTTGCT
CCCTGTCCGATAAATCCTCAAAATCAGTGCGGTTTCTTCTAAATAATGTG
AGTGGAGAGGCGAAACCTGGAAGATTATTGGCGATAATGGGACCGTCAGG
GTCAGGGAAAACAACGTTGCTGAATGTTCTGGCGGGTCAGTTAATGGCAT
CGCCACGATTACATTTATCCGGCCTATTGGAAGTCAATGGAAAACCTAGT
TCAAACAAAGCTTATAAGTTTGCCTATGTGAGACAGGAGGATCTTTTTTT
CTCTCAGTTGACAGTGCGGGAAACACTCTCTCTTGCAGCTGAACTTCAGC
TTCCAGAAATACTTTCTGTGGAAGAGAGAGATGAATATGTGAACAGTCTT
TTATTCAAGCTGGGCTTGGTCAGTT
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