FC868711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 45/135 (33.33%), Postives = 78/135 (57.78%), Query Frame = 2 Query: 320 VTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 + + ++++T +L K + +L +V+G+ PGR+ A+MGPSG+GKTT L+ LAG+ R +GL+ +NG+ S +YK +V Q+D+ LTV E L +A +L +S ++ + ++ LGL Sbjct: 463 IEVAFKDLTLTLKGKH----KHILRSVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKATGCTR---TGLILINGRNDSINSYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMSKADKVLIIERVIESLGL 590
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: CDR1_CANAL (Multidrug resistance protein CDR1 OS=Candida albicans GN=CDR1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 60/205 (29.27%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 92 NFGGNKVGQVVAGIGGNGVGQVLAAVAVSLLFRLFTGPGPALVTDDDSAYGDDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 N G + G++V + G+ + + A S + GP + D A ++E+ + G + P + ++F W+++T + K K R +L++V G KPG++ A+MG SG+GKTTLLN L+ ++ + G VNG S+ YV+Q+D+ TVRE L +A L+ +S +E+D+YV+ ++ Sbjct: 786 NKGAMQKGEIVLFLKGS-LKKHKRKTAASNKGDIEAGPVAGKLDYQDEAEAVNNEKFTEKGSTGSVDFPENREIF----FWRDLTYQV--KIKKEDRVILDHVDGWVKPGQITALMGASGAGKTTLLNCLSERVTTG--IITDGERLVNGHALDSSFQRSIGYVQQQDVHLPTSTVREALQFSAYLRQSNKISKKEKDDYVDYVI 981
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 60/178 (33.71%), Postives = 91/178 (51.12%), Query Frame = 2 Query: 260 NDVAEANGDGEA----------PVDGKVFPVTIRWQNITCSLSDKSSKSVRF-------------LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 N+++ ANGD + VD K + ++ Q +D S + +LNNVSG + G L+A+MGPSGSGK+TLL++LA + ++G L VNGK +AYK +YV QED+ TV ETL A+L+LP + + E+ + V ++ +GL Sbjct: 8 NNISLANGDSKGVQLTFKNIVYKVDNKKYKKLVKKQEKAKKKNDTESSTGDMNTGVSTTIEKELTILNNVSGVIEKGELVALMGPSGSGKSTLLDILAQRKSTG---KITGQLLVNGK-EIGEAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLPGVSEI-EKIKRVEQIIEDIGL 180
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG4_DICDI (ABC transporter G family member 4 OS=Dictyostelium discoideum GN=abcG4 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 47/113 (41.59%), Postives = 72/113 (63.72%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF--AYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 +L+NVSG + G ++A+MGPSGSGK+TLL++LA + ++G + VNGK +AYK +YV QE++F TV ETL A+L+LP++ E+D + +L +GL Sbjct: 235 ILSNVSGIVEKGEMVALMGPSGSGKSTLLDILANRKSTGT---ITGKILVNGK-EIGEAYKMFCSYVTQEEVFLETSTVYETLKFHADLRLPDMTDT-EKDIRIKQVLKDVGL 342
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG2_DICDI (ABC transporter G family member 2 OS=Dictyostelium discoideum GN=abcG2 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 47/135 (34.81%), Postives = 80/135 (59.26%), Query Frame = 2 Query: 326 IRWQNITCSLS-DKSSKSVRF-LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGLV 721 ++W+++ + K K+ R LLN ++G KPG LLA+MGPSG+GK+TLL+VLA + H G + +NG+ + + AYV Q D+ TV+E + +A+ +LP + EE+ ++V +++ L L+ Sbjct: 715 MQWKDLVYEVDVKKDGKNQRLRLLNEINGYVKPGMLLALMGPSGAGKSTLLDVLANRKTGG---HTKGQILINGQERTKYFTRLSAYVEQFDVLPPTQTVKEAILFSAKTRLPSDMPNEEKIKFVENIIETLNLL 846 HSP 2 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 2 Query: 335 QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAY--KFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 +N++ S+ + R +L++++ KPG ++ I+G G GKT+++ LA QL + +SG L NGK ++ + AYV Q D + TVRET +A+LQ+ E S EE++ V+ +L L L Sbjct: 56 RNLSMSIGTEKKGDKRNILSDLNFFLKPGSMVLILGSPGCGKTSVMKALANQLHSET---VSGSLLFNGKAANKSTHHRDVAYVVQGDHHMAPFTVRETFKFSADLQMSEGTSEEEKNARVDYILKTLDL 182
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 2 Query: 380 RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAY--KFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 + LL N SG A PG LLA+MG SG+GKTTLLN A + ++ S + +NG P K + AYV+Q+DLF LT RE L A +++P ++ +++ + V+ ++ L L Sbjct: 101 KHLLKNDSGVAYPGELLAVMGSSGAGKTTLLNASAFRSSKGVQISPSTIRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHMTQKQKVQRVDQVIQDLSL 215
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 365 SSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFA-YVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGLVS 724 S + ++ ++NN +G +PG L+A+MG SGSGKTTL++ LA + A + G + +NG+ ++ + YV Q+DLF LTV E L+ A L+L +S EER + LL + GL+S Sbjct: 83 SGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAG--TVVQGDILINGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLS 201
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 LL+NVSG PG L A++G SG+GKTTL++VLAG+ + G + ++G P + + YV Q D+ Q+TV E+L +A L+LP+ ++ E++ E+V ++ Sbjct: 853 LLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YTEGDIRISGHPKEQQTFARISGYVEQNDIHSPQVTVEESLWFSASLRLPKEITKEQKKEFVEQVM 957
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCGF_DICDI (ABC transporter G family member 15 OS=Dictyostelium discoideum GN=abcG15 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13 Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 332 WQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 WQ++ S+ +++ LL+++ G KPG++ A+MG SG+GKTTLL+VLA + + G +NGKP + YV Q D+ LTVRETL +A+L+ +S+EE+ +YV +L Sbjct: 844 WQHMYYSVPI-GGNTMKLLLDDIQGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTTG---QVQGTTLLNGKPLEIDFERITGYVEQMDVLNPALTVRETLRFSAKLRGEPTISLEEKFKYVEQVL 964
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPS-SNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 +L N++G KPG L AI+GP+G GK++LL+VLA + P LSG + +NG P +N YV Q+D+ LTVRE L +A L+LP ++ E++E +N ++ +LGL Sbjct: 63 ILTNINGIMKPG-LNAILGPTGGGKSSLLDVLAAR--KDPH-GLSGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINMVIQELGL 170 The following BLAST results are available for this feature:
BLAST of FC868711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868711 ID=FC868711; Name=FC868711; organism=Citrus clementina; type=EST; length=725bpback to top |