FC868711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCGE_DICDI (ABC transporter G family member 14 OS=Dictyostelium discoideum GN=abcG14 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 54/139 (38.85%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 299 VDGKVFPVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQL---MASPRLHLSGL-LEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 +DG +F WQNI ++ K R LLNN+ G KPG++ A+MG SG+GKTTLL+VLA + + HL+G LE++ + + YV Q D+ LTVRE L +A+L+ +S+EE+ +YV +L Sbjct: 800 MDGGIFT----WQNIRYTV--KVPGGERLLLNNIEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTLGVVEGDSHLNGRELEIDFERIT------GYVEQMDVHNPGLTVREALRFSAKLRQEPEVSLEEKFKYVEHVL 926
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13 Identity = 47/113 (41.59%), Postives = 74/113 (65.49%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNG--KPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 +L+N++G KPG L AI+GP+G GK++LL+VLA + S LSG + +NG +P++ K YV Q+D+ LTVRE L +A L+LP ++ E++E +N ++ +LGL Sbjct: 63 ILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSG---LSGDVLINGALRPTNFKCNS-GYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGL 170
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13 Identity = 46/112 (41.07%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPS-SNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 +L N++G KPG L AI+GP+G GK++LL++LA + P LSG + +NG P +N YV Q+D+ LTVRE L +A L+LP ++ E++E +N ++ +LGL Sbjct: 62 ILANINGVMKPG-LNAILGPTGGGKSSLLDILAAR--KDPH-GLSGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGL 169
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13 Identity = 72/233 (30.90%), Postives = 113/233 (48.50%), Query Frame = 2 Query: 143 GVGQVLAAVAV-SLLFRLFT------GPGPALVTDDD------SAYGDD--------DERNDVAEAN-GDGEAP-----VDGKVFPVT---IRWQNITCS------LSDKSSKSVRFLL-NNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGLVS 724 GVG +L + + ++LF LF G G A+V++++ + G++ D +N ++AN G GE G V P T I + NI S + DK R LL VSG +PG L A+MG SG+GKTTL++VLAG+ ++ G + ++G P + + Y Q D+ +TV E+L +A L+LP + E R +V ++ + L S Sbjct: 755 GVGALLGYIMLFNILFILFLEWLDPLGKGQAVVSEEELREKHVNRTGENVELLTLGTDSQNSPSDANAGRGEITGADTRKRGMVLPFTPLSITFDNIRYSVDMPQEMKDKGVTEDRLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDISISGYPKKQETFARIAGYCEQNDIHSPHVTVYESLLYSAWLRLPSEVDSEARKMFVEEVMELVELTS 984
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13 Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 2 Query: 356 SDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 S S S + N+S + + G++LAI+G SG G+ +LL+V+ G+ SG + +NG+PS+ + + A+VRQ D LTVRETL+ A+++LP S +RD+ V ++ +L L Sbjct: 78 SHSSQDSCELGIRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMK--SGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRL 198
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 46/112 (41.07%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPS-SNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 +L+N++G KPG L AI+GP+G GK++LL+VLA + S LSG + +NG P +N YV Q+D+ LTVRE L +A L+L ++ E++E +N ++ +LGL Sbjct: 63 ILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSG---LSGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGL 170
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 49/131 (37.40%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 317 PVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNG--KPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 P+T +Q++ + K ++ LL++V+G KPG L A+MG SG+GKTTLL+VL+G+ R + G +EV G K + Y Q D+ LTV+E+L +A L+LP +S E + VN +L Sbjct: 795 PLTFTFQDVQYFIETPQGKKLQ-LLSDVTGAFKPGVLTALMGVSGAGKTTLLDVLSGR---KTRGDIKGQIEVGGYVKVQDTFSRVSGYCEQFDIHSPNLTVQESLKYSAWLRLPCNISSETKSAIVNEVL 921
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 2 Query: 317 PVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 P+T+ +QN+ + K+ R LL++++G KPG L ++MG SG+GKTTLL+VL+G+ R + G ++V G P + + Y Q D+ +TV E+L +A L+LP + + ++E V +L Sbjct: 805 PLTVTFQNVQYYIETPQGKT-RQLLSDITGALKPGVLTSLMGVSGAGKTTLLDVLSGR---KTRGIIKGEIKVGGYPKVQETFARVSGYCEQFDIHSPNITVEESLKYSAWLRLPYNIDSKTKNELVKEVL 931
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCGB_DICDI (ABC transporter G family member 11 OS=Dictyostelium discoideum GN=abcG11 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 269 AEANGDGEAPVDGKVFPVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQL---MASPRLHLSGL-LEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 A +N +DG +F WQNI ++ K R LL+N+ G KPG++ A+MG SG+GKTTLL+VLA + + HL+G LE++ + + YV Q D+ LTVRE L +A+L+ +S+EE+ +YV +L Sbjct: 793 ATSNMKDTLHMDGGIFT----WQNIRYTV--KVPGGERLLLDNIEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTLGVVEGDSHLNGRELEIDFERIT------GYVEQMDVHNPGLTVREALRFSAKLRQEPEVSLEEKFKYVEHVL 929
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 41/112 (36.61%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 389 LNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 + N+S + + G++LAI+G +G G+ TLL+V+ G+ SG + +NG+PS+ + + A+VRQ+D LTVRETL+ A+++LP+ S +RD+ V ++ +L L Sbjct: 110 IRNLSFKVRSGQMLAIIGSAGCGRATLLDVITGRDHGGKMK--SGQIWINGQPSTPQLIQKCVAHVRQQDQLLPNLTVRETLTFIAQMRLPKTFSQAQRDKRVEDVIAELRL 219 The following BLAST results are available for this feature:
BLAST of FC868711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868711 ID=FC868711; Name=FC868711; organism=Citrus clementina; type=EST; length=725bpback to top |