FC868711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12 Identity = 50/171 (29.24%), Postives = 89/171 (52.05%), Query Frame = 2 Query: 197 TGPGPALVTDDDSAYGDDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 T PG +V + Y +E N + P+ ++ Q +T +DK LL+ +SG +PG L A+MG SG+GKTTL++VL+G+ ++ G + ++G P + + Y Q D+ Q+TVRE+L +A L+LP+ ++ +E+ +V+ ++ Sbjct: 893 TAPGRGMVLPFEPLYMSFNEINYYVD-------------MPLEMKSQGVT---ADKLQ-----LLSGISGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YIEGEIYISGYPKNQATFARISGYCEQNDIHSPQITVRESLLFSAFLRLPKEVNDQEKKIFVDEVM 1039
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG9_DICDI (ABC transporter G family member 9 OS=Dictyostelium discoideum GN=abcG9 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12 Identity = 47/125 (37.60%), Postives = 72/125 (57.60%), Query Frame = 2 Query: 332 WQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 W+NI ++ K+ + LL++V G KPG++ A+MG SG+GKTTLL+VLA + + G +NGK + YV Q D+ LTVRE L +A+L+ +S+EE+ +YV +L Sbjct: 824 WENIKYTVP--VGKTQKLLLDDVEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTLGT---VQGKTFLNGKALEIDFERITGYVEQMDVHNPGLTVREALRFSAKLRQEPSVSLEEKYDYVEHVL 943
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12 Identity = 43/123 (34.96%), Postives = 71/123 (57.72%), Query Frame = 2 Query: 356 SDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 S S + N+S + + G++LAI+G SG G+ +LL+V+ G+ SG + +NG+PSS + + A+VRQ + LTVRETL+ A+++LP S +RD+ V ++ +L L Sbjct: 77 SPSCQNSCELGIQNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKIK--SGQIWINGQPSSPQLVRKCVAHVRQHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRL 197
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.052e-11 Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 2 Query: 317 PVTIRWQNITCSLS---DKSSKSVR----FLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 P+ + ++NIT S+ + K +R LLN +SG +PG L A+MG SG+GKTTL++VLAG+ ++ G + V+G P ++ Y Q D+ LTV E+L +A L+LP + R+ ++ ++ Sbjct: 818 PLYMTFENITYSVDTPKEMKEKGIRENKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKNTG---YIQGEIYVSGFPKKQDSFARVSGYCEQSDIHSPLLTVYESLLYSAWLRLPPDIDTHTRELFIEEVM 952
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11 Identity = 59/198 (29.80%), Postives = 95/198 (47.98%), Query Frame = 2 Query: 146 VGQVLAAVAVSLLFRLFTGPGPALVTDDDSAYGDDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDKS---SKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGLVS 724 VG L AV++ L G P ++T N + EA P K V I + ++ S+ + + + LL +SG+ L+ IMGPSG+GK+T +N+LAG + + G + VNG+P + ++ Y+ Q+D+ LTV E + ++A L+L E E + E V +L LGL+S Sbjct: 9 VGCGLGPGAVAMAVTLEDGAEPPVLTTHLKKV-----ENHITEAQRFSHLP---KRSAVDIEFVELSYSVREGPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESG----MKGQILVNGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSE--KQEVKKELVTEILTALGLMS 192
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11 Identity = 51/161 (31.68%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 257 RNDVAEANGDGEAPVDGKVFPVTIR---------WQNITCSLSDKSSKSVRF-LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 R+ AEA+G G G V P T + ++ + D+ R LL V+G +PG L A+MG SG+GKTTL++VLAG+ ++ G + ++G P + + Y Q D+ Q+TVRE+L +A L+LP+ + +E+ +V+ ++ Sbjct: 842 RDSAAEASG-GAGNKKGMVLPFTPLAMSFDDVKYFVDMPGEMRDQGVTETRLQLLKGVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDVRISGFPKVQETFARISGYCEQTDIHSPQVTVRESLIFSAFLRLPKEVGKDEKMMFVDQVM 998
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCG3_DICDI (ABC transporter G family member 3 OS=Dictyostelium discoideum GN=abcG3 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11 Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 383 FLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 +LLNN+S KPGR++ +MG G+GK+ LL VL +L + + G L+ N ++ +V Q+D + LTVRETL +A+ + E +S EE+ E V+ +L +LGL Sbjct: 125 YLLNNISFTMKPGRMILLMGIPGAGKSLLLKVLGNRL---GKGKIEGELKFNNHEVDETTHQRDTIFVSQDDRHIALLTVRETLEFSAKCNMGENVSQEEQSERVDLVLDQLGL 235
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 383 FLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 F+L N++ + P ++LAI+GPSG+GK+TLL++LA + + L + +N PSS + +YV Q D FF LTV ET + +A L LP+ LS + V SLL +L L Sbjct: 29 FILRNITLTSHPSQILAIIGPSGAGKSTLLDILAARTSPTSGSILLNSVLIN--PSSYRKIS-SYVPQHDTFFPLLTVSETFTFSASLLLPKNLS--KVSSVVASLLKELNL 135
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: PDR1_SCHPO (ATP-binding cassette transporter pdr1 OS=Schizosaccharomyces pombe GN=pdr1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 2 Query: 332 WQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASP---RLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 W+++ ++ K+SK + +L NVSG K L A++G + SGK+ LL +L+ + +A + LSGL K N + YVR+ LF S+ TVRETL L A L+ + S+ E+ YV ++ LGL Sbjct: 760 WRDLNFTVVTKTSK--KQILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGL-----KNPKNLRKRIGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGL 884
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: ABCGA_DICDI (ABC transporter G family member 10 OS=Dictyostelium discoideum GN=abcG10 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 43/107 (40.19%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 LLN+V G KPG++ A+MG SG+GKTTLL+VLA + ++G +NGK + + YV Q D+ LTVRE L +A+L+ +S++++ EYV +L Sbjct: 856 LLNDVEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTMGT---VTGKCLLNGKELNIDFERITGYVEQMDVHNPGLTVREALRFSAKLRQEPTVSLQDKYEYVEQVL 959 The following BLAST results are available for this feature:
BLAST of FC868711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868711 ID=FC868711; Name=FC868711; organism=Citrus clementina; type=EST; length=725bpback to top |