FC868712

Overview
NameFC868712
Unique NameFC868712
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.521e-42
Identity = 89/219 (40.64%), Postives = 127/219 (57.99%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLML-DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            + I CKA V W  G+PL +EE++V PP++ EVRVK+L+ S+CHTD+   E     P++PR+ GHE  G+VES G+ V +V  GD V+P + GECKEC +C S  +N+C    I  + G+M+ DG SR S+ G+ +YH    ST+SEY V+    V K++P         LSCG +TG GA+   AK  K                    R+ GA++I+G
Sbjct:    6 KVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQIPMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTDRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIG 224          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.624e-41
Identity = 88/225 (39.11%), Postives = 124/225 (55.11%), Query Frame = 1
Query:   43 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC-----LKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            +  + I CKA + W  G+PL VEEI+V PPK  EVRVK++   VC TD    +  F   ++P +LGHEG G+VES G  V + K GD VIP Y+ +C  C+ C +  TNLC     +K PI+   +M DGTSR + +G+ +YH    ST+SEY V+  + + K+D +        + CGF+TGYGAA   A+V+                     +  GA+KI G
Sbjct:    2 TEGKVIKCKAAIAWEAGKPLSVEEIEVSPPKDHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKVIPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFGLGGVGLSAVMGCKAAGASKIFG 226          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41
Identity = 95/216 (43.98%), Postives = 121/216 (56.02%), Query Frame = 1
Query:   58 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDGTSRM-SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKIL 696
            I C A V +   +PL VEEI V+ PK+ EVR+K+ Y +VCHTD     G  P  L+P VLGHEG G+VES GD+V  VK GD VI  Y  EC +C+ CTS  TNLC         G+M DGT+R  + +G+ +YH   CST+SEY V+    VV +DP      A  L CG TTG+GAA K A V K                    ++ GA+KI+
Sbjct:   10 IKCIAAVAYDAKKPLSVEEITVDAPKAHEVRIKIEYTAVCHTDAYTLSGSDPEGLFPCVLGHEGAGIVESVGDDVITVKPGDHVIALYTAECGKCKFCTSGKTNLCGAVRATQGKGVMPDGTTRFHNAKGEDIYHFMGCSTFSEYTVVADVSVVAIDPKAPLDAACLLGCGVTTGFGAALKTANVQKGDTVAVFGCGTVGLSVIQGAKLRGASKII 225          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41
Identity = 91/187 (48.66%), Postives = 113/187 (60.43%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVD 606
            + ITCKA V WG  EPL +E+IQV PPK+ EVRVK+ +++VCHTD     G  P   +P VLGHEG G+VES G+ V  V+ GD VI  Y  ECKEC+ C S  TNLC K       GLM DGTSR S R + L H   CS++S+Y V+    +V +  S        L CG TTG+GA    AKV+
Sbjct:    6 KTITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGLMPDGTSRFSCRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVE 192          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41
Identity = 91/225 (40.44%), Postives = 128/225 (56.89%), Query Frame = 1
Query:   40 MSNS--QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLML-DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            MSN+  Q I C+A V W  G+PL +EE++V PP++ EVR+K+L+ S+CHTD+   E     PL+PR+ GHE  G+VES G+ V  +K GD  +P + GEC EC +C SE +N+C    I  + G+ML D  SR S++GQ ++H    ST+SEY V+ A  V K++P         LSCG  TG GA    AK                       R+ GA++I+G
Sbjct:    1 MSNTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIG 225          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41
Identity = 89/218 (40.83%), Postives = 127/218 (58.26%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-ALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            + I CKA + W + +PL +E+I+V PPK+ EVR+K+L   +C +D  + S  F  PL P VLGHE  GVVES G+ V  VK GD VIP ++ +C +C +C S   NLC    + A  GLM DGTSR + +G+ L+H  S S+++EY V+  N VVK+D +        + CGF+TGYGAA + AKV+                     +  GA++I+G
Sbjct:    5 KVIKCKAAIAWEIKKPLSIEQIEVAPPKAHEVRIKILATGICRSDDHVISGAFKMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFVPQCGKCSSCRSTRGNLCTSNDLSAATGLMPDGTSRFTCKGKSLHHFISTSSFTEYTVVHENSVVKIDAAAPLEKVCLIGCGFSTGYGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIG 221          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADHL1_ARATH (Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.725e-41
Identity = 91/225 (40.44%), Postives = 129/225 (57.33%), Query Frame = 1
Query:   43 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL---CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY--PIALNGLMLDGTSRM-SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            +  + ITCKA +C   GE L +E+I V+PP++ EVR+K+L  S+CHTD+     S G P   +PR+LGHE VGVVES G+ V   K+GD+V+P +   C+EC++C S  TN C +Y      N       SR     G+ ++H    S++SEY V+D  ++VK+ P I    A+ LSCG +TG GAAWK A V++                    R+ GAAKI+G
Sbjct:    9 NEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFG-PISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIG 232          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.725e-41
Identity = 87/219 (39.73%), Postives = 126/219 (57.53%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLML-DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            + I CKA V W   +PL +EE++V PP++ EVRVK+L+ S+CHTD+   E     P++PR+ GHE  G+VES G+ V ++  GD V+P + GECKEC +C S  +N+C    I  + G+M+ DG SR S+ G+ +YH    ST+SEY V+    V K++P+        LSCG +TG GA    AK  K                    R+ GA++I+G
Sbjct:    6 KVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIG 224          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.725e-41
Identity = 87/219 (39.73%), Postives = 126/219 (57.53%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLML-DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            + I CKA V W   +PL +EE++V PP++ EVRVK+L+ S+CHTD+   E     P++PR+ GHE  G+VES G+ V ++  GD V+P + GECKEC +C S  +N+C    I  + G+M+ DG SR S+ G+ +YH    ST+SEY V+    V K++P+        LSCG +TG GA    AK  K                    R+ GA++I+G
Sbjct:    6 KVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIG 224          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.171e-41
Identity = 89/191 (46.60%), Postives = 112/191 (58.64%), Query Frame = 1
Query:   43 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAP-LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDK 609
            +  Q I CKA V W  G+ L +EEI+V PP++ EVRVK+ +  VCHTD     G  A   +P V GHEG GVVES G+ V+ VK GD V+  Y  EC+EC+ C S  TNLC K       GL+ DGTSR   +G+ L+H   CS++S+Y V+    VVKV           L CG TTGYGAA   AK+ K
Sbjct:    3 TEGQIIKCKAAVAWEAGKDLSIEEIEVLPPRAHEVRVKVEFTGVCHTDAYTLSGADAEGSFPVVFGHEGAGVVESVGEGVESVKVGDSVVLLYTPECRECKFCLSGKTNLCGKIRATQGKGLLPDGTSRFRCKGKDLFHYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISK 193          
The following BLAST results are available for this feature:
BLAST of FC868712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
ADH1_HORVU9.521e-4240.64Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH4_STRCA1.624e-4139.11Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
FADH_YEAST2.770e-4143.98S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
FADH1_SCHPO2.770e-4148.66Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH1_PEA2.770e-4140.44Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1A_UROHA2.770e-4140.83Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADHL1_ARATH4.725e-4140.44Alcohol dehydrogenase-like 1 OS=Arabidopsis thalia... [more]
ADH1_ORYSJ4.725e-4139.73Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI4.725e-4139.73Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
FADH_PICPA6.171e-4146.60S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]

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Properties
Property NameValue
Genbank descriptionC31003G12EF AbioticL1 Citrus clementina cDNA clone C31003G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868712 ID=FC868712; Name=FC868712; organism=Citrus clementina; type=EST; length=714bp
GGGAAATTCGAGGCTGCGAAATCCCCAGCAATACTAACAATGAGCAATTC
ACAAGCCATAACGTGCAAAGCTGTGGTATGTTGGGGTTTAGGAGAGCCAT
TAAAGGTAGAGGAGATACAAGTAGAGCCTCCGAAATCAACTGAAGTTAGG
GTTAAGATGCTTTATGCCAGTGTTTGTCACACTGATATCCTTTGCTCTGA
AGGATTCCCAGCGCCTCTTTATCCTCGTGTTCTCGGGCACGAAGGTGTCG
GGGTGGTGGAGAGTGCTGGGGATGAAGTGAAAGAAGTGAAAGAAGGAGAT
ATTGTGATTCCAACTTATATTGGAGAATGTAAAGAATGTGAAAATTGCAC
ATCAGAAATGACCAATTTATGCCTAAAATATCCAATAGCACTGAACGGTT
TAATGCTTGATGGCACTTCAAGAATGTCCGTAAGAGGCCAAAAATTGTAT
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTAGTCAAAGTTGATCCAAGCATTGATCCCTCGGATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGACAAAGGATCTAGTGTTGCTGTTTTAGGGCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCACGGGGCAGCTAAGATATTGGGAT
AGACAAGAACCATG
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