FC868712

Overview
NameFC868712
Unique NameFC868712
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.171e-41
Identity = 87/186 (46.77%), Postives = 110/186 (59.14%), Query Frame = 1
Query:   58 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDK 609
            ITCKA V W   +PL +E++ V PPK  EVR+K+    VCHTD     G  P   +P +LGHEG G+VES G+ V  VK GD VI  Y  EC EC+ C S  TNLC K       G+M DGTSR + +G+++ H   CST+S+Y V+    VV ++P  +   A  L CG TTGYGAA   A V K
Sbjct:   10 ITCKAAVAWEAAKPLSIEDVTVAPPKRHEVRIKLYDTGVCHTDAYTLSGVDPEGAFPVILGHEGAGIVESIGEGVTNVKVGDHVIALYTPECGECKFCKSGKTNLCGKIRATQGKGVMPDGTSRFTCKGKEILHFMGCSTFSQYTVVADISVVAINPKAEFDKACLLGCGITTGYGAATITANVQK 195          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41
Identity = 87/218 (39.91%), Postives = 120/218 (55.05%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            + I CKA V W  G+PL +EE++V PP + EVR+K+    VCHTD     G  P  L+P +LGHEG G VES G+ V + K GD VIP Y+ +C EC+ C +  TNLC K  I    GL+ D TSR + +G++++H    ST+SEY V+    + KV+          L CG +TGYGAA   AKV+                     ++ GA +I+G
Sbjct:    6 KVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQGLLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIG 223          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41
Identity = 89/193 (46.11%), Postives = 120/193 (62.18%), Query Frame = 1
Query:   43 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVID--ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDK 609
            +  + ITCKA V W   +PL +E+I+V+PP+  EVR+K+LY  VCHTD     G  P  ++P +LGHEG G+VES G+ V  VK GD VIP YI EC  C+ CTS  TNLC K  I    G M DGT+R   +G++++H    ST+S+Y V+   +  VV+ D  +D      L CG TTG+GAA   AKV++
Sbjct:    3 TEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQMPDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLD--KVCLLGCGITTGFGAAKITAKVEE 193          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41
Identity = 88/229 (38.43%), Postives = 130/229 (56.77%), Query Frame = 1
Query:   28 AILTMSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY--PIALNGLMLDGTSRMSVR-GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            ++ ++   + I CKA V    GE L +EEI V+PP++ EVR+K++  S+CHTD+  S+    PL  +PR+LGHE VGV+ES G+ V   ++GD+V+P +   C+EC +C S  +N C ++      N      TSR     G+ +YH    S++SEY V+D  ++VK+ P I    A+ LSCG +TG GAAWK A V+K                    R+ GA KI+G
Sbjct:    5 SMFSIHEGKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARFPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIG 233          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.053e-40
Identity = 89/222 (40.09%), Postives = 123/222 (55.41%), Query Frame = 1
Query:   43 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA--LNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            +  Q ITCKA V +   +PL +E++QV PP++ EVRVK+L+ ++CHTD     G  P  L+P +LGHE  G+VES G+ V +V+ GD VIP Y  ECKEC+ C S  TNLC K   A  +  +M D  SR SV G+ +YH    ST+S+Y V+    V K++P         L CG  TG GA W  AKV+                     +  GA++++G
Sbjct:    5 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIG 226          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.375e-40
Identity = 83/187 (44.39%), Postives = 112/187 (59.89%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVD 606
            + I C+A V W  G+PL +EE++V PP++ EVR+K++   +CHTD     G  P  ++P VLGHEG G+VES G+ V + K GD VIP Y+ +C EC+ C +  TNLC K  +    GLM +GTSR S  GQ L+H    ST+SEY V+    + KV           L C  +TGYGAA   AKV+
Sbjct:    5 KTIRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPNGTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGYGAALNTAKVE 191          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 164.851 bits (416), Expect = 4.000e-40
Identity = 86/225 (38.22%), Postives = 124/225 (55.11%), Query Frame = 1
Query:   43 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC-----LKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            +  + I CKA + W  G+PL +EE++V PPK+ EVR++++  S+CHTD    +  F    +P ++GHE  G+VES G  V  VK GD VIP Y   C++C+ C S +TNLC     LK P +   LM D TSR + +G+ +YH F  ST+S+Y V+    + K+D   +      L CGF+TGYGAA   AKV                      +  GA++I+G
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIG 227          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.911e-40
Identity = 80/217 (36.87%), Postives = 122/217 (56.22%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-ALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            + I CKA + W + +P  +EEI+V PPK+ EVR+K+L   +C +D   + G      P +LGHE  GVVES G+ V  +K GD VIP ++ +C EC  C     NLC++  + + +GLM DGTSR + +G+ ++H    ST++EY V+    V ++D +        + CGF+TGYGAA K+AKV+                     +  GA++I+G
Sbjct:    5 KVIKCKAAITWEIKKPFSIEEIEVAPPKAHEVRIKILATGICRSDDHVTAGLLTMPLPMILGHEAAGVVESTGEGVTSLKPGDKVIPLFVPQCGECMPCLKSNGNLCIRNDLGSPSGLMADGTSRFTCKGKDIHHFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVEPGSTCAVFGLGGVGLSTIMGCKAAGASRIIG 221          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 81/193 (41.97%), Postives = 114/193 (59.07%), Query Frame = 1
Query:   43 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-----PIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 603
            +  + I CKA + W  G+PL +EE++V PPK+ EVRV++  A +C +D  + +  F     P +LGHEG G+VES G  V  VK GD VIP YI  CK+C+ C S +TN C K+     P+    LM D TSR + +G+ +YH F  S +S+Y V+    + K+D   +      + CGF+TGYGAA   AKV
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHEGAGIVESVGPGVTNVKPGDKVIPLYIPHCKKCKFCLSPLTNFCEKFCKGKNPLIEQELMEDKTSRFTCKGKSIYHFFGISAFSQYTVVKDVNLAKIDDDANLERVCLIGCGFSTGYGAAINTAKV 195          
BLAST of FC868712 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 84/217 (38.71%), Postives = 119/217 (54.84%), Query Frame = 1
Query:   52 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVDKXXXXXXXXXXXXXXXXXXXXRMHGAAKILG 699
            Q ITC A V W  GEPL +EE++V PP+  E+R+K++  S+C +D+   E     L PR+ GHE  G+VES G+ V E ++GD V+  + GEC  C +C S  +N+C    +   GLM  D  +R S++G+ +YH  + S++SEY V+ +   VKVDP         LSCG   G GAAW  A V K                    ++ GAA+ILG
Sbjct:   12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWES--QSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERKGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILG 226          
The following BLAST results are available for this feature:
BLAST of FC868712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
FADH_CANMA6.171e-4146.77S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADHX_SPAAU8.060e-4139.91Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_DICDI8.060e-4146.11Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHL5_ARATH8.060e-4138.43Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
ADHX_MAIZE1.053e-4040.09Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHL_GADMO1.375e-4044.39Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH4_HUMAN4.000e-4038.22Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADH1_ALLMI8.911e-4036.87Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADHP_RABIT1.985e-3941.97Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADHL6_ARATH1.985e-3938.71Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionC31003G12EF AbioticL1 Citrus clementina cDNA clone C31003G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868712 ID=FC868712; Name=FC868712; organism=Citrus clementina; type=EST; length=714bp
GGGAAATTCGAGGCTGCGAAATCCCCAGCAATACTAACAATGAGCAATTC
ACAAGCCATAACGTGCAAAGCTGTGGTATGTTGGGGTTTAGGAGAGCCAT
TAAAGGTAGAGGAGATACAAGTAGAGCCTCCGAAATCAACTGAAGTTAGG
GTTAAGATGCTTTATGCCAGTGTTTGTCACACTGATATCCTTTGCTCTGA
AGGATTCCCAGCGCCTCTTTATCCTCGTGTTCTCGGGCACGAAGGTGTCG
GGGTGGTGGAGAGTGCTGGGGATGAAGTGAAAGAAGTGAAAGAAGGAGAT
ATTGTGATTCCAACTTATATTGGAGAATGTAAAGAATGTGAAAATTGCAC
ATCAGAAATGACCAATTTATGCCTAAAATATCCAATAGCACTGAACGGTT
TAATGCTTGATGGCACTTCAAGAATGTCCGTAAGAGGCCAAAAATTGTAT
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTAGTCAAAGTTGATCCAAGCATTGATCCCTCGGATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGACAAAGGATCTAGTGTTGCTGTTTTAGGGCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCACGGGGCAGCTAAGATATTGGGAT
AGACAAGAACCATG
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