FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38
Identity = 81/190 (42.63%), Postives = 122/190 (64.21%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38
Identity = 81/190 (42.63%), Postives = 122/190 (64.21%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38
Identity = 81/190 (42.63%), Postives = 122/190 (64.21%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38
Identity = 81/190 (42.63%), Postives = 122/190 (64.21%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38
Identity = 81/190 (42.63%), Postives = 122/190 (64.21%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ECO57 (Chaperone protein htpG OS=Escherichia coli O157:H7 GN=htpG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38
Identity = 81/190 (42.63%), Postives = 122/190 (64.21%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38
Identity = 80/190 (42.11%), Postives = 124/190 (65.26%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R   EI  DEY  FYK   ++F DPL++SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI D+ + +  P YL FV+G++DS+DLPLNVSREILQ+SRI + +R  L ++   M++ +++ ++ E Y++FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRGKAEISDDEYKAFYKHIAHDFTDPLSWSHNRVEGKQEYTSLLYIPAQAPW---DMWNRDHKHGLKLYVQRVFIMDEAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSRITQNLRSALTKRVLQMLEKLAK-DDAEKYQQFWQQFGMALKEGPAEDGSNKETIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38
Identity = 80/190 (42.11%), Postives = 124/190 (65.26%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R   EI  DEY  FYK   ++F DPL++SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI D+ + +  P YL FV+G++DS+DLPLNVSREILQ+SRI + +R  L ++   M++ +++ ++ E Y++FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRGKAEISDDEYKAFYKHIAHDFTDPLSWSHNRVEGKQEYTSLLYIPAQAPW---DMWNRDHKHGLKLYVQRVFIMDEAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSRITQNLRSALTKRVLQMLEKLAK-DDAEKYQQFWQQFGMALKEGPAEDGSNKETIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38
Identity = 80/190 (42.11%), Postives = 124/190 (65.26%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R   EI  DEY  FYK   ++F DPL++SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI D+ + +  P YL FV+G++DS+DLPLNVSREILQ+SRI + +R  L ++   M++ +++ ++ E Y++FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRGKAEISDDEYKAFYKHIAHDFTDPLSWSHNRVEGKQEYTSLLYIPAQAPW---DMWNRDHKHGLKLYVQRVFIMDEAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSRITQNLRSALTKRVLQMLEKLAK-DDAEKYQQFWQQFGMALKEGPAEDGSNKETIAKLLRFASTHTD 408
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_YERPE (Chaperone protein htpG OS=Yersinia pestis GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38
Identity = 80/190 (42.11%), Postives = 124/190 (65.26%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R   EI  DEY  FYK   ++F DPL++SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI D+ + +  P YL FV+G++DS+DLPLNVSREILQ+SRI + +R  L ++   M++ +++ ++ E Y++FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  222 WEKINKAQALWTRGKAEISDDEYKAFYKHIAHDFTDPLSWSHNRVEGKQEYTSLLYIPAQAPW---DMWNRDHKHGLKLYVQRVFIMDEAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSRITQNLRSALTKRVLQMLEKLAK-DDAEKYQQFWQQFGMALKEGPAEDGSNKETIAKLLRFASTHTD 406
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_ECOLI1.762e-3842.63Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC1.762e-3842.63Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL61.762e-3842.63Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL51.762e-3842.63Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]
HTPG_ECOHS1.762e-3842.63Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]
HTPG_ECO571.762e-3842.63Chaperone protein htpG OS=Escherichia coli O157:H7... [more]
HTPG_YERPS2.301e-3842.11Chaperone protein htpG OS=Yersinia pseudotuberculo... [more]
HTPG_YERPP2.301e-3842.11Chaperone protein htpG OS=Yersinia pestis (strain ... [more]
HTPG_YERPN2.301e-3842.11Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_YERPE2.301e-3842.11Chaperone protein htpG OS=Yersinia pestis GN=htpG ... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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