FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_YERPA (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38
Identity = 80/190 (42.11%), Postives = 124/190 (65.26%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R   EI  DEY  FYK   ++F DPL++SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI D+ + +  P YL FV+G++DS+DLPLNVSREILQ+SRI + +R  L ++   M++ +++ ++ E Y++FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRGKAEISDDEYKAFYKHIAHDFTDPLSWSHNRVEGKQEYTSLLYIPAQAPW---DMWNRDHKHGLKLYVQRVFIMDEAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSRITQNLRSALTKRVLQMLEKLAK-DDAEKYQQFWQQFGMALKEGPAEDGSNKETIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_KLEP7 (Chaperone protein htpG OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.301e-38
Identity = 80/190 (42.11%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R+  E+  DEY EFYK   +++ DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+S + R +R  L ++   M+  +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF T+ ++
Sbjct:  224 WEKINKAQALWTRSKSEVNDDEYKEFYKHIAHDYSDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSSVTRNLRTALTKRALQMLDKLAK-DDAEKYQTFWKQFGLVLKEGPAEDPSNQEAIAKLLRFATTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 81/190 (42.63%), Postives = 124/190 (65.26%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R  K+I  DEY+EFYK   ++F  PLA+SH   EG+ E+ S+LY+P   P +  +    K   I+LYV+RVFI DD + +L P+YL FV+GV+DS DLPLNVSREILQ SR +  ++   V+K   M++D+++++  E Y +FW+ FG+ +K G  ED    +++A LLRF ++ ++ +
Sbjct:  230 ETVNKASALWARPKKDISDDEYNEFYKHVAHDFEPPLAWSHNRVEGKQEYISLLYVPSHAPFDLYD--REKRHGIKLYVRRVFIMDDAE-QLMPQYLRFVRGVIDSADLPLNVSREILQSSRDIDAIKNGSVKKVLGMLEDLAENQ-PEKYVEFWKEFGKVMKEGPGEDFANKEKIAGLLRFASTHTDTD 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSESM (Chaperone protein htpG OS=Pseudomonas syringae pv. tomato GN=htpG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 78/190 (41.05%), Postives = 123/190 (64.74%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N    +W R   E++ +EY EFYK   +++ +PL++SH   EG++E+ S+LY+P   P +  +   P  + ++LYV+RVF+ D  +  L P Y+ FVKGVVDS+DL LNVSREILQ+  I+  M+  L ++  DM++ ++++E  E YK FW+NFG+ LK G  ED    +++A LLRF ++  +
Sbjct:  230 EWETVNRASALWTRPRTEVKDEEYQEFYKHVAHDYENPLSWSHNKVEGKLEYTSLLYVPARAPFDLYQREAP--RGLKLYVQRVFVMDQAESFL-PLYMRFVKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNE-PEQYKGFWKNFGQVLKEGPAEDFANKEKIAGLLRFASTSDD 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSE14 (Chaperone protein htpG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 78/190 (41.05%), Postives = 123/190 (64.74%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N    +W R   E++ +EY EFYK   +++ +PL++SH   EG++E+ S+LY+P   P +  +   P  + ++LYV+RVF+ D  +  L P Y+ FVKGVVDS+DL LNVSREILQ+  I+  M+  L ++  DM++ ++++E  E YK FW+NFG+ LK G  ED    +++A LLRF ++  +
Sbjct:  230 EWETVNRASALWTRPRTEVKDEEYQEFYKHVAHDYENPLSWSHNKVEGKLEYTSLLYVPARAPFDLYQREAP--RGLKLYVQRVFVMDQAESFL-PLYMRFVKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNE-PEQYKGFWKNFGQVLKEGPAEDFANKEKIAGLLRFASTSDD 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PHOLL (Chaperone protein htpG OS=Photorhabdus luminescens subsp. laumondii GN=htpG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 80/190 (42.11%), Postives = 124/190 (65.26%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R   EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N + K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ I R +R  L ++   M+  +++ ++ E Y++FW+ FG  +K G  EDS   + +A LLRF ++ ++
Sbjct:  227 WEKINKAQALWTRGKSEITDEEYKEFYKHISHDFTDPLIWSHNRVEGKQEYTSMLYIPSQAPW---DMWNREHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDNSITRNLRNALTKRALQMLDKLAK-DDAEKYQQFWQQFGLVMKEGPAEDSTNKEAIAKLLRFASTHND 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_YERE8 (Chaperone protein htpG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38
Identity = 80/190 (42.11%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R   EI  DEY  FYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+SR+ + +R  L ++   M++ +++ ++ E Y++FW+ FG  LK G  ED      +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRGKAEITDDEYKAFYKHIAHDFTDPLIWSHNRVEGKQEYTSLLYIPAQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSRVTQNLRSALTKRVLQMLEKLAK-DDAEKYQQFWQQFGMALKEGPAEDGSNKDTIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RALME (Chaperone protein htpG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38
Identity = 84/193 (43.52%), Postives = 122/193 (63.21%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKED---YKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N+   +W R+  +I  ++Y  FY+   ++   PLA++H   EG  E+  +LYIP   P +  +  N K   ++LYVKRVFI DD D +L P YL +VKGVVDS DLPLNVSRE+LQESR V+ +R+   ++   M++ ++ SE++ +   YK FWE FG+ LK G  ED G  +R+A LLRF T+  +
Sbjct:  228 EWESVNQASALWTRSKSDITDEQYQAFYQHIAHDHEAPLAWTHNRVEGRSEYTQLLYIPARAPFDLWD-RNHKA-GLKLYVKRVFIMDDAD-QLLPAYLRWVKGVVDSADLPLNVSRELLQESRDVKAIREGCAKRVLSMLEAMADSEDEAERAKYKTFWEQFGQVLKEGVGEDHGNGERIAKLLRFATTHGD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSEU2 (Chaperone protein htpG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=htpG PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38
Identity = 78/190 (41.05%), Postives = 123/190 (64.74%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N    +W R   E++ +EY EFYK   +++ +PL++SH   EG++E+ S+LY+P   P +  +   P  + ++LYV+RVF+ D  +  L P Y+ FVKGVVDS+DL LNVSREILQ+  I+  M+  L ++  DM++ ++++E  E YK FW+NFG+ LK G  ED    +++A LLRF ++  +
Sbjct:  230 EWETVNRASALWTRPRTEVKDEEYQEFYKHVAHDYENPLSWSHNKVEGKLEYTSLLYVPARAPFDLYQREAP--RGLKLYVQRVFVMDQAESFL-PLYMRFVKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNE-PEKYKGFWKNFGQVLKEGPAEDFANKEKIAGLLRFASTSDD 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NITEC (Chaperone protein htpG OS=Nitrosomonas eutropha (strain C91) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38
Identity = 83/193 (43.01%), Postives = 122/193 (63.21%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDIS---QSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   IW R   EI +++Y EFYK   ++F  PLA+ H   EG+ E+  +LYIP   P +  +        ++LY+KRVFI DD + +L P YL FV+G++DS+DLPLNVSREILQES+ +  +R   V+K   +I+D++   +SE++E +K FW  FG+ LK G  ED    +R+A LLRF ++  E+E
Sbjct:  232 ETVNQASAIWARPKNEITQEQYDEFYKHVAHDFEPPLAHVHARVEGKQEYIQLLYIPAHAPFDLFD--REHRHGLKLYIKRVFIMDDAE-KLLPGYLRFVRGIIDSNDLPLNVSREILQESKDIDSIRAGSVKKVLGLIEDLATSDKSEDQEKFKIFWREFGQVLKEGVAEDYSNRERIAKLLRFTSTHDEQE 421          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_YERPA2.301e-3842.11Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_KLEP72.301e-3842.11Chaperone protein htpG OS=Klebsiella pneumoniae su... [more]
HTPG_THIDA3.005e-3842.63Chaperone protein htpG OS=Thiobacillus denitrifica... [more]
HTPG_PSESM3.005e-3841.05Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSE143.005e-3841.05Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PHOLL3.005e-3842.11Chaperone protein htpG OS=Photorhabdus luminescens... [more]
HTPG_YERE83.925e-3842.11Chaperone protein htpG OS=Yersinia enterocolitica ... [more]
HTPG_RALME3.925e-3843.52Chaperone protein htpG OS=Ralstonia metallidurans ... [more]
HTPG_PSEU23.925e-3841.05Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_NITEC3.925e-3843.01Chaperone protein htpG OS=Nitrosomonas eutropha (s... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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