FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_DECAR (Chaperone protein htpG OS=Dechloromonas aromatica (strain RCB) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38
Identity = 80/188 (42.55%), Postives = 122/188 (64.89%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            E  N+   +W+R+  +I +++Y EFYK   ++F DPLA++H   EG+ E+  +LYIP   P +  +        I+LYV+RVFI DD + +L P Y+ FV+GVVDS DLPLNVSREILQ+S+ +  +R    RK   M++D+++++ KE Y KFWE FG  LK G  ED    +++A L+RF ++ ++
Sbjct:  234 ETVNQANALWVRSKSDITEEQYKEFYKHVAHDFEDPLAWTHARVEGKQEYTQLLYIPARAPFDLWD--RNARHGIKLYVRRVFIMDDAE-QLMPLYMRFVRGVVDSSDLPLNVSREILQQSKDIDGIRSGCTRKVLGMLEDLAEND-KEKYAKFWEAFGSVLKEGVGEDHANKEKIAGLIRFSSTHND 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38
Identity = 83/191 (43.46%), Postives = 119/191 (62.30%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            WE  N T  +WMR   EI  D+Y  FYK   ++F DP+ + H   EG   + S+LYIP   P +  E        I+LYV+RVFI +D + +L PRYL FV+G+VDSDDLPLNVSRE+LQ + ++  +R   V++  D ++ ++++E  E Y +F+ NFG+ LK G  ED    +R+A LLRF T++ E E
Sbjct:  236 WETVNNTNALWMRPKSEISDDDYKAFYKHVAHDFDDPMVWLHNHVEGRQSYTSLLYIPKNPPFDLYE--REPAHGIKLYVRRVFIMEDTE-KLMPRYLRFVRGLVDSDDLPLNVSRELLQHNPLLDKIRSASVKRILDRLEKMAKNE-PEQYAEFYGNFGKVLKEGVAEDFANRERIAKLLRFSTTQDENE 422          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SODGM (Chaperone protein htpG OS=Sodalis glossinidius (strain morsitans) GN=htpG PE=3 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 79/190 (41.58%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  +I  DEY EFYK   ++F +PL++SH   EG+ E+ S+LYIP   P    ++ N + K+ ++LYV+RVFI DD + +  P YL FVKG++DS+DLPLNVSREILQ+SR+ + ++  L ++   M++ +++ ++ + Y+ FW+ FG  LK G  ED    + +A LLRF ++  +
Sbjct:  228 WEKINKAQALWTRNKADISDDEYKEFYKHLSHDFSEPLSWSHNRVEGKQEYTSLLYIPAKAPW---DMWNREHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVKGLIDSNDLPLNVSREILQDSRVTQNLKGALTKRALSMLEKLAK-DDAQQYQSFWQEFGLVLKEGAGEDPTNGEAVAKLLRFASTHGD 412          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_METCA (Chaperone protein htpG OS=Methylococcus capsulatus GN=htpG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 81/191 (42.41%), Postives = 119/191 (62.30%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            WE  N    +W +N  EI  + Y EFYK   ++F +PLA  H   EG  E+  +LYIP   P +  +      + ++LYV++VFI +D D +L PRYL FV+GV+DSD LPLNVSREILQE++ +  +R   V+K   +++D++ +E  E Y+ FW+ FG+ LK G +ED     RLA LLRF ++ ++ E
Sbjct:  231 WETVNSASALWAKNRDEITDEAYDEFYKHVSHDFQEPLARVHSRVEGTNEYTLLLYIPKHAPFDLWD--RDSKRGVKLYVRKVFIMEDSD-KLMPRYLRFVRGVIDSDSLPLNVSREILQENKQLEKIRGGAVKKVLGLLEDLANNE-PEKYQAFWKEFGQVLKEGLIEDFANKDRLAKLLRFSSTHTDSE 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MANSM (Chaperone protein htpG OS=Mannheimia succiniciproducens (strain MBEL55E) GN=htpG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 83/197 (42.13%), Postives = 126/197 (63.96%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELF-PRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF---YTSKSEEEL 727
            WE  N+ + +W R+  EI  DEY EFYK   ++F DPL++ H   EG  E+ S+LY+PG  P    ++ N + K+ ++LYV+RVFI D  D E+F P YL F++G++DS+DLPLNVSREILQ+++    +RK L +++  M++ +++ E  E Y  FW+ FG  LK G  ED    +++A L RF   +T  SE+ +
Sbjct:  226 WEKINKAQALWTRSKAEISDDEYKEFYKHISHDFADPLSWMHNKVEGNQEYTSLLYVPGKAPW---DLFNREQKHGLKLYVQRVFIMD--DAEVFMPNYLRFMRGLLDSNDLPLNVSREILQDNKTTAALRKALTKRSLQMLEKLAKDE-PEKYAVFWKEFGLVLKEGVAEDFANKEQIAKLYRFASTHTDSSEQNV 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ECOUT (Chaperone protein htpG OS=Escherichia coli (strain UTI89 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 80/190 (42.11%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F +PL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNEPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 80/190 (42.11%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F +PL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNEPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBHB (Chaperone protein htpG OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=htpG PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38
Identity = 76/188 (40.43%), Postives = 124/188 (65.96%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSK 712
            WE  N+ + +W RN  EI ++EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++MN   K+ ++LYV+RVFI DD + +  P Y+ FV+G++DS+DLPLNVSREILQ++++ + +R    ++   M+  +++++  E Y+ FW+ FG  +K G  ED    +++A LLRF +++
Sbjct:  232 WEQINKAQALWTRNKSEISEEEYQEFYKHVSHDFADPLTWSHNRVEGKNDYTSLLYIPAKAPW---DMMNRDHKSGLKLYVQRVFIMDDAE-QFMPSYMRFVRGLIDSNDLPLNVSREILQDNKVTQSLRNACTKRVLTMLDRMAKNDT-EKYQSFWKEFGLVMKEGVAEDMANKEKVAGLLRFASTE 414          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38
Identity = 83/194 (42.78%), Postives = 121/194 (62.37%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF---YTSKSEE 721
            W   N+ + +W RN  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF   YT  S +
Sbjct:  224 WAKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTYTDSSAQ 412          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38
Identity = 80/190 (42.11%), Postives = 121/190 (63.68%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W RN  +I  ++Y EFYK   +++ DPLA++H   EG  E+  +LY+P   P +  +      + ++LYVKRVFI DD + +L P YL FV+GV+DS DLPLNVSREILQESR VR +R+   ++   +++D+++++  EDY  FW  FG+ LK G  ED+   +R+A LL F ++   E+
Sbjct:  235 ETVNQANALWTRNKSDITDEQYREFYKTVSHDYDDPLAWTHNRVEGRSEYTQLLYVPRHAPFDLWD--RDARRGVKLYVKRVFIMDDAE-QLLPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENK-AEDYATFWTEFGQVLKEGTGEDAANRERIARLLCFASTHDGEQ 420          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_DECAR3.925e-3842.55Chaperone protein htpG OS=Dechloromonas aromatica ... [more]
HTPG_ALHEH3.925e-3843.46Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
HTPG_SODGM5.126e-3841.58Chaperone protein htpG OS=Sodalis glossinidius (st... [more]
HTPG_METCA5.126e-3842.41Chaperone protein htpG OS=Methylococcus capsulatus... [more]
HTPG_MANSM5.126e-3842.13Chaperone protein htpG OS=Mannheimia succiniciprod... [more]
HTPG_ECOUT5.126e-3842.11Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOK15.126e-3842.11Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_VIBHB6.695e-3840.43Chaperone protein htpG OS=Vibrio harveyi (strain A... [more]
HTPG_SHIFL6.695e-3842.78Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_BORPA6.695e-3842.11Chaperone protein htpG OS=Bordetella parapertussis... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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