FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_AGGAC (Chaperone protein htpG OS=Aggregatibacter actinomycetemcomitans GN=htpG PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38
Identity = 76/190 (40.00%), Postives = 126/190 (66.32%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N++  +W R+  EI  +EY EFYK   ++F DPL ++H   EG  E+ S+LY+P   P    ++ N + K+ ++LYV+RVFI DD + +  P YL F++G++DS+DLPLNVSREILQ++++   +RK L +++  M++ +++ ++ E Y++FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  227 WEKINKSDALWTRSKNEISDEEYKEFYKHLSHDFADPLLWAHNKVEGNQEYTSLLYVPSKAPW---DLFNREHKHGLKLYVQRVFIMDDAE-QFMPNYLRFMRGLIDSNDLPLNVSREILQDNKVTAALRKALTKRSLQMLEKLAK-DDAEKYQQFWKEFGLVLKEGPAEDFANKEAIAKLLRFASTHND 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBPA (Chaperone protein htpG OS=Vibrio parahaemolyticus GN=htpG PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38
Identity = 77/188 (40.96%), Postives = 125/188 (66.49%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSK 712
            WE  N+ + +W RN  +I  +EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++MN   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++++ + +R    ++   M++ +++++ +E Y+ FW+ FG  LK G  ED    +++A LLRF +++
Sbjct:  232 WEQINKAQALWTRNKADISDEEYQEFYKHVSHDFADPLVWSHNRVEGKNDYTSLLYIPSKAPW---DMMNRDHKSGLKLYVQRVFIMDDAE-QFMPSYLRFVRGLIDSNDLPLNVSREILQDNKVTQSLRNACTKRVLTMLERMAKND-EEKYQSFWKEFGLVLKEGPAEDFANKEKIAGLLRFASTE 414          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_POLNA (Chaperone protein htpG OS=Polaromonas naphthalenivorans (strain CJ2) GN=htpG PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38
Identity = 85/195 (43.59%), Postives = 117/195 (60.00%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +WE  N+   +W R  K+I  + Y EFYK+   +   PLA +H   EG  E+  +L+IP   P++       K   ++LYVKRVFI DD    L P YL FVKGVVDS DLPLNVSRE+LQESR V+ +R+   ++   MI+D++ +E  E +K F+  FG  LK G  ED    +RLA LLRF +S ++   +S
Sbjct:  230 EWETVNQAAALWTRPKKDITPEHYAEFYKQISYDSEAPLATTHNRVEGATEYTQLLFIPAKAPMDMYN--RDKAAGVKLYVKRVFIMDDAQA-LLPTYLRFVKGVVDSSDLPLNVSRELLQESRAVKAIREGCTKRVLSMIEDLANNE-PEKFKTFYAEFGAVLKEGLGEDFANRERLAKLLRFASSTTDTTTVS 420          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NITEU (Chaperone protein htpG OS=Nitrosomonas europaea GN=htpG PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38
Identity = 83/193 (43.01%), Postives = 118/193 (61.14%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKED---YKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   IW R   EI +++Y EFYK   ++F  PLA+ H   EG+ E+  +LYIP   P +  +        ++LYV+RVFI DD + +L P YL FV+G++DS DLPLNVSREILQES+ +  +R   V+K   +I+D++ S+  ED   +K FW  FG+ LK G  ED    +R+A LLRF ++  E E
Sbjct:  232 ETINQASAIWARPKNEITQEQYDEFYKHVAHDFEPPLAHVHARVEGKQEYIQLLYIPAHAPFDLFD--REHRHGLKLYVRRVFIMDDAE-KLLPGYLRFVRGIIDSSDLPLNVSREILQESKDIDSIRAGSVKKVLGLIEDLAMSDKSEDQEKFKTFWREFGQVLKEGIAEDYSNRERIAKLLRFTSTHDERE 421          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHESH (Chaperone protein htpG OS=Shewanella sediminis (strain HAW-EB3) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.142e-37
Identity = 76/191 (39.79%), Postives = 125/191 (65.45%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            W+  N+   +W RN  ++ K+EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++L+V+RVF+ DD + +  P YL FV+G++DS+DLPLNVSREILQ++++   +R  + ++   M++ +++++  E Y+ FW  FG+ LK G  ED    +R+A LLRF ++ +E+
Sbjct:  234 WQSMNKATALWTRNKSDVSKEEYEEFYKHISHDFTDPLLWSHNRVEGKQEYTSLLYIPSKAPW---DMWNRDRKHGLKLFVQRVFVMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALRTAVTKRVLGMLEKLAKND-AEKYQTFWAEFGQVLKEGPAEDMVNKERIAGLLRFASTHTED 419          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.142e-37
Identity = 75/188 (39.89%), Postives = 126/188 (67.02%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            E+ N+   +W R+  EI  ++Y EFYK   +++  PLA++HF  +G  +F  +L++P   P + +     + + +RL+VKRVFI D  + EL P++L FV+GV+DSDDLPLNVSRE+LQ+S++VR +RK +V+K+ D+++ +++ +  +DY  FW+ FG  LK G   ++ +  +L  LLR+ +S+ E
Sbjct:  234 EVVNKASALWQRSKSEITDEQYQEFYKHLTHDWEAPLAWTHFKADGNTQFTGLLFVPKQPPFDLDA---QQQRGVRLFVKRVFIMDRCE-ELVPQWLRFVRGVIDSDDLPLNVSRELLQDSQVVRAIRKHVVKKSVDLLEKLAK-DKPDDYLTFWKAFGTVLKEGLATEAEQKDKLGGLLRYESSREE 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.492e-37
Identity = 80/190 (42.11%), Postives = 121/190 (63.68%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS DL LNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLSLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CHRSD (Chaperone protein htpG OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=htpG PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.492e-37
Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  NE   +W+R  +EI  DEY  FYK   ++F DPL +SH   EG++E+ S+LY+PG  P   +       + ++LYV+RVFI DD + +  P YL F+KGVVDS DL LNVSRE+LQ+   V  ++  L +++ DM++ +++ E  E Y+ FW  FG  LK G  ED     ++A LLRF +++++
Sbjct:  233 WETVNEATALWVRPKEEISDDEYKAFYKHVAHDFSDPLTWSHNKVEGKLEYTSLLYVPGRAPF--DLYQREGVRGLKLYVQRVFIMDDAE-QFLPLYLRFIKGVVDSKDLSLNVSRELLQKDPQVDKLKSALTKRSLDMLKKLAKDE--EAYQTFWNAFGNVLKEGPAEDFANRDKIADLLRFSSTQTD 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_XANAC (Chaperone protein htpG OS=Xanthomonas axonopodis pv. citri GN=htpG PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37
Identity = 78/184 (42.39%), Postives = 115/184 (62.50%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE  N    +W R   EI+ +EY EFYK   ++  +PLA+SH   EG++E+ S+L++PG  P   +       K ++LYV+RVFI D  + +  P YL F+KGVVDS DL LNVSREILQ   +V  M+  L +++ DM++ +++ +  +DY  FW NFG+ LK G  ED    +++A LLRF
Sbjct:  229 EWEAVNRASALWTRPKSEIKDEEYQEFYKHVAHDAGNPLAWSHNKVEGKLEYTSLLFVPGRAPF--DLYHRDSAKGLKLYVQRVFIMDQAE-QFLPLYLRFIKGVVDSSDLSLNVSREILQSGPVVDSMKSALTKRSLDMLEKLAK-DKPDDYATFWRNFGQALKEGPAEDYANREKIAGLLRF 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBVY (Chaperone protein htpG OS=Vibrio vulnificus (strain YJ016) GN=htpG PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37
Identity = 79/197 (40.10%), Postives = 129/197 (65.48%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSK--SEEELIS 733
            WE  N+ + +W RN  +I  +EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++MN   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++++ + +R    ++   M++ +++++  E Y+ FW+ FG  +K G  ED    +++A LLRF +++  S E+ +S
Sbjct:  232 WEQINKAQALWTRNKSDISDEEYQEFYKHVSHDFADPLLWSHNRVEGKNDYTSLLYIPSKAPW---DMMNRDHKSGLKLYVQRVFIMDDAE-QFMPSYLRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERLAKNDT-EKYQTFWKEFGLVMKEGPAEDYANREKVAALLRFASTEVDSAEQTVS 423          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_AGGAC6.695e-3840.00Chaperone protein htpG OS=Aggregatibacter actinomy... [more]
HTPG_VIBPA8.744e-3840.96Chaperone protein htpG OS=Vibrio parahaemolyticus ... [more]
HTPG_POLNA8.744e-3843.59Chaperone protein htpG OS=Polaromonas naphthaleniv... [more]
HTPG_NITEU8.744e-3843.01Chaperone protein htpG OS=Nitrosomonas europaea GN... [more]
HTPG_SHESH1.142e-3739.79Chaperone protein htpG OS=Shewanella sediminis (st... [more]
HTPG_MYXXD1.142e-3739.89Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
HTPG_SHIDS1.492e-3742.11Chaperone protein htpG OS=Shigella dysenteriae ser... [more]
HTPG_CHRSD1.492e-3741.80Chaperone protein htpG OS=Chromohalobacter salexig... [more]
HTPG_XANAC1.948e-3742.39Chaperone protein htpG OS=Xanthomonas axonopodis p... [more]
HTPG_VIBVY1.948e-3740.10Chaperone protein htpG OS=Vibrio vulnificus (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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