FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_FRATH (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain LVS) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.544e-37
Identity = 81/189 (42.86%), Postives = 122/189 (64.55%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKS 715
            ++E  N TK IW+R+  E+  +EY EFYK   ++F D L + H   EG +E+ S+LYIP   P +       K   + LYV+RVFI +  + EL P YL FVKGV+DS DLPLNVSREILQ ++++  ++K +  K    ++ ++ S++KE Y+KFW++FG+ LK G  +D    +++A LLRF T++S
Sbjct:  225 EYETVNNTKAIWLRSKGEVTNEEYQEFYKYISHDFADALMWIHNKVEGNLEYNSLLYIPQNKPFDFWN--RDKDYGLSLYVRRVFIME--NKELLPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLA-SKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQS 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_FRATF (Chaperone protein htpG OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.544e-37
Identity = 81/189 (42.86%), Postives = 122/189 (64.55%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKS 715
            ++E  N TK IW+R+  E+  +EY EFYK   ++F D L + H   EG +E+ S+LYIP   P +       K   + LYV+RVFI +  + EL P YL FVKGV+DS DLPLNVSREILQ ++++  ++K +  K    ++ ++ S++KE Y+KFW++FG+ LK G  +D    +++A LLRF T++S
Sbjct:  225 EYETVNNTKAIWLRSKGEVTNEEYQEFYKYISHDFADALMWIHNKVEGNLEYNSLLYIPQNKPFDFWN--RDKDYGLSLYVRRVFIME--NKELLPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLA-SKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQS 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_FRAT1 (Chaperone protein htpG OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.544e-37
Identity = 81/189 (42.86%), Postives = 122/189 (64.55%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKS 715
            ++E  N TK IW+R+  E+  +EY EFYK   ++F D L + H   EG +E+ S+LYIP   P +       K   + LYV+RVFI +  + EL P YL FVKGV+DS DLPLNVSREILQ ++++  ++K +  K    ++ ++ S++KE Y+KFW++FG+ LK G  +D    +++A LLRF T++S
Sbjct:  225 EYETVNNTKAIWLRSKDEVTDEEYQEFYKYISHDFADALMWIHNKVEGNLEYNSLLYIPQNKPFDFWN--RDKDYGLSLYVRRVFIME--NKELLPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLA-SKDKEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTQS 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEHH (Chaperone protein htpG OS=Shewanella halifaxensis (strain HAW-EB4) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 76/191 (39.79%), Postives = 124/191 (64.92%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            W+L N+   +W RN  ++  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++L+V+RVF+ DD + +  P YL FV+G++DS+DLPLNVSREILQ++++   +R  + ++   M++ +++++  E Y+ FW  FG+ LK G  ED    +R+A LLRF ++ + E
Sbjct:  235 WKLMNKATALWTRNKSDVSDEEYQEFYKYISHDFTDPLLWSHNRVEGKQEYTSLLYIPAKAPW---DMWNRDRKHGLKLFVQRVFVMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALRTAVTKRVLGMLEKLAKND-AEKYQSFWTEFGQVLKEGPAEDFANKERVAGLLRFASTHTGE 420          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SACD2 (Chaperone protein htpG OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 78/189 (41.27%), Postives = 120/189 (63.49%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLN--NEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            ++E+ N  K +W R+  ++  +EY EFYK   +++ DPL++SH   EG++++ S++YIP   P +  N E    K + ++LYV+R FI DD + +  P YL F+KGVVDS+DL LNVSREILQ+   +  MR  L ++  DM++ +++ E  E Y  FW+ FG  LK G  ED    +++A LLRF T+
Sbjct:  230 EYEVINTAKALWARSRSDVTDEEYKEFYKHVSHDYTDPLSWSHNRVEGKLDYTSLIYIPSKAPFDMYNRE----KPRGVKLYVQRTFIMDDAE-QFLPLYLRFIKGVVDSNDLSLNVSREILQQDPNIDSMRSALTKRVLDMLEKMAKKE-PEKYATFWKEFGEVLKEGPAEDFANKEKIAKLLRFATT 412          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PASMU (Chaperone protein htpG OS=Pasteurella multocida GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 76/190 (40.00%), Postives = 123/190 (64.74%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R   EI ++EY EFYK   ++F DPL ++H   EG  E+ S+LY+P   P    ++ N + K+ ++LYV+RVFI DD      P YL F++G++DS+DLPLNVSREILQ++++   +RK L ++   M++ +++ ++ E Y++FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  227 WEKINKAQALWTRAKNEISEEEYQEFYKHLSHDFTDPLLWAHNKVEGNQEYTSLLYVPAKAPW---DLFNREHKHGLKLYVQRVFIMDDAQ-VFMPNYLRFMRGLLDSNDLPLNVSREILQDNKVTSALRKALTKRALQMLEKLAK-DDAEKYQRFWQEFGLVLKEGPAEDFANKETIAKLLRFASTHND 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURXL (Chaperone protein htpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 81/192 (42.19%), Postives = 122/192 (63.54%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            E  N+   +W R+  +I  ++Y +FY+   ++  DPL ++H   EG  E+  +LY+P   P    ++ N   +  ++LYVKRVFI DD + +L P YL FVKGVVDS DLPLNVSREILQESR V+ +R+ + ++   M++D++ S+N   KE Y  FW+ FG+ LK G  ED    +R+A LLRF ++ ++
Sbjct:  228 ETVNQASALWTRSKSDITDEQYKQFYQHLSHDHQDPLTWTHNRVEGRSEYTQLLYVPTHAPF---DMFNRDHRGGLKLYVKRVFIMDDAE-QLLPAYLRFVKGVVDSADLPLNVSREILQESRDVKAIREGVTKRVLSMLEDLANSDNEADKEKYAGFWKEFGQVLKEGIGEDFANRERIAKLLRFASTHTD 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_XANOR (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae GN=htpG PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 77/184 (41.85%), Postives = 115/184 (62.50%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE  N    +W R   EI+ +EY EFYK   ++  +PLA+SH   EG++E+ S+L++PG  P   +       K ++LYV+RVFI D  + +  P YL F+KGVVDS DL LNVSREILQ   +V  M+  L +++ DM++ +++ +  +DY  FW NFG+ LK G  ED    +++A L+RF
Sbjct:  229 EWEAVNRASALWTRPKSEIKDEEYQEFYKHIAHDAGNPLAWSHNKVEGKLEYTSLLFVPGRAPF--DLYHRDSAKGLKLYVQRVFIMDQAE-QFLPLYLRFIKGVVDSSDLSLNVSREILQSGPVVDSMKSALTKRSLDMLEKLAK-DKPDDYATFWRNFGQALKEGPAEDYANREKIAGLMRF 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_XANOM (Chaperone protein htpG OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 77/184 (41.85%), Postives = 115/184 (62.50%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE  N    +W R   EI+ +EY EFYK   ++  +PLA+SH   EG++E+ S+L++PG  P   +       K ++LYV+RVFI D  + +  P YL F+KGVVDS DL LNVSREILQ   +V  M+  L +++ DM++ +++ +  +DY  FW NFG+ LK G  ED    +++A L+RF
Sbjct:  229 EWEAVNRASALWTRPKSEIKDEEYQEFYKHIAHDAGNPLAWSHNKVEGKLEYTSLLFVPGRAPF--DLYHRDSAKGLKLYVQRVFIMDQAE-QFLPLYLRFIKGVVDSSDLSLNVSREILQSGPVVDSMKSALTKRSLDMLEKLAK-DKPDDYATFWRNFGQALKEGPAEDYANREKIAGLMRF 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBVU (Chaperone protein htpG OS=Vibrio vulnificus GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 78/197 (39.59%), Postives = 129/197 (65.48%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSK--SEEELIS 733
            WE  N+ + +W RN  +I  +EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++MN   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++++ + +R    ++   M++ +++++  + Y+ FW+ FG  +K G  ED    +++A LLRF +++  S E+ +S
Sbjct:  232 WEQINKAQALWTRNKSDISDEEYQEFYKHVSHDFADPLLWSHNRVEGKNDYTSLLYIPSKAPW---DMMNRDHKSGLKLYVQRVFIMDDAE-QFMPSYLRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERLAKNDT-DKYQTFWKEFGLVMKEGPAEDYANREKVASLLRFASTEVDSAEQTVS 423          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_FRATH2.544e-3742.86Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRATF2.544e-3742.86Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_FRAT12.544e-3742.86Chaperone protein htpG OS=Francisella tularensis s... [more]
HTPG_SHEHH3.323e-3739.79Chaperone protein htpG OS=Shewanella halifaxensis ... [more]
HTPG_SACD23.323e-3741.27Chaperone protein htpG OS=Saccharophagus degradans... [more]
HTPG_PASMU3.323e-3740.00Chaperone protein htpG OS=Pasteurella multocida GN... [more]
HTPG_BURXL3.323e-3742.19Chaperone protein htpG OS=Burkholderia xenovorans ... [more]
HTPG_XANOR4.340e-3741.85Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]
HTPG_XANOM4.340e-3741.85Chaperone protein htpG OS=Xanthomonas oryzae pv. o... [more]
HTPG_VIBVU4.340e-3739.59Chaperone protein htpG OS=Vibrio vulnificus GN=htp... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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