FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCM (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain M66-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 80/197 (40.61%), Postives = 128/197 (64.97%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS--KSEEELIS 733
            WE  N+ + +W R   E+  +EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++ N + K+ ++LYV+RVFI DD   +  P YL FV+G++DS+DLPLNVSREILQ+++I + +R+   ++   M++ ++ S + ++Y+KFW+ FG  +K G  ED    +++A LLRF ++   S E+ IS
Sbjct:  232 WEQINKAQALWTRAKSEVTDEEYKEFYKHVSHDFADPLVWSHNKVEGKNDYTSLLYIPAKAPW---DLFNREHKHGLKLYVQRVFIMDD-AAQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKITQSLRQACTKRVLTMLERMA-SNDADNYQKFWKEFGLVMKEGPAEDFANREKIASLLRFASTHIDSAEQTIS 423
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCH (Chaperone protein htpG OS=Vibrio cholerae GN=htpG PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 80/197 (40.61%), Postives = 128/197 (64.97%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS--KSEEELIS 733
            WE  N+ + +W R   E+  +EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++ N + K+ ++LYV+RVFI DD   +  P YL FV+G++DS+DLPLNVSREILQ+++I + +R+   ++   M++ ++ S + ++Y+KFW+ FG  +K G  ED    +++A LLRF ++   S E+ IS
Sbjct:  232 WEQINKAQALWTRAKSEVTDEEYKEFYKHVSHDFADPLVWSHNKVEGKNDYTSLLYIPAKAPW---DLFNREHKHGLKLYVQRVFIMDD-AAQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKITQSLRQACTKRVLTMLERMA-SNDADNYQKFWKEFGLVMKEGPAEDFANREKIASLLRFASTHIDSAEQTIS 423
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBC3 (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 80/197 (40.61%), Postives = 128/197 (64.97%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS--KSEEELIS 733
            WE  N+ + +W R   E+  +EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++ N + K+ ++LYV+RVFI DD   +  P YL FV+G++DS+DLPLNVSREILQ+++I + +R+   ++   M++ ++ S + ++Y+KFW+ FG  +K G  ED    +++A LLRF ++   S E+ IS
Sbjct:  232 WEQINKAQALWTRAKSEVTDEEYKEFYKHVSHDFADPLVWSHNKVEGKNDYTSLLYIPAKAPW---DLFNREHKHGLKLYVQRVFIMDD-AAQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKITQSLRQACTKRVLTMLERMA-SNDADNYQKFWKEFGLVMKEGPAEDFANREKIASLLRFASTHIDSAEQTIS 423
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHESW (Chaperone protein htpG OS=Shewanella sp. (strain W3-18-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 77/184 (41.85%), Postives = 121/184 (65.76%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W++ N+   +WMRN  EI  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ I + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPW---DLWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 77/184 (41.85%), Postives = 121/184 (65.76%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W++ N+   +WMRN  EI  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ I + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPW---DLWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 77/184 (41.85%), Postives = 121/184 (65.76%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W++ N+   +WMRN  EI  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ I + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPW---DLWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHESA (Chaperone protein htpG OS=Shewanella sp. (strain ANA-3) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 77/184 (41.85%), Postives = 121/184 (65.76%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W++ N+   +WMRN  EI  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ I + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPW---DLWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPC (Chaperone protein htpG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 77/184 (41.85%), Postives = 121/184 (65.76%), Query Frame = 2 
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W++ N+   +WMRN  EI  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ I + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPW---DLWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURTA (Chaperone protein htpG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 78/194 (40.21%), Postives = 124/194 (63.92%), Query Frame = 2 
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   ++ +++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETVNQASALWTRAKSDVTEEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGVGEDHANRERVAKLLRFASTHGDTD 417
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURPS (Chaperone protein htpG OS=Burkholderia pseudomallei GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 79/194 (40.72%), Postives = 123/194 (63.40%), Query Frame = 2 
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   E+  ++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETINQASALWTRAKSEVTDEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGVGEDHANRERVAKLLRFASTHGDTD 417
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_VIBCM4.340e-3740.61Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_VIBCH4.340e-3740.61Chaperone protein htpG OS=Vibrio cholerae GN=htpG ... [more]
HTPG_VIBC34.340e-3740.61Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_SHESW4.340e-3741.85Chaperone protein htpG OS=Shewanella sp. (strain W... [more]
HTPG_SHESR4.340e-3741.85Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESM4.340e-3741.85Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESA4.340e-3741.85Chaperone protein htpG OS=Shewanella sp. (strain A... [more]
HTPG_SHEPC4.340e-3741.85Chaperone protein htpG OS=Shewanella putrefaciens ... [more]
HTPG_BURTA4.340e-3740.21Chaperone protein htpG OS=Burkholderia thailandens... [more]
HTPG_BURPS4.340e-3740.72Chaperone protein htpG OS=Burkholderia pseudomalle... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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