FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURP6 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 79/194 (40.72%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   E+  ++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETINQASALWTRAKSEVTDEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGIGEDHANRERVAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURP1 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1710b) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 79/194 (40.72%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   E+  ++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETINQASALWTRAKSEVTDEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGVGEDHANRERVAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURP0 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1106a) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 79/194 (40.72%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   E+  ++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETINQASALWTRAKSEVTDEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGVGEDHANRERVAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURMS (Chaperone protein htpG OS=Burkholderia mallei (strain SAVP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 79/194 (40.72%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   E+  ++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETINQASALWTRAKSEVTDEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGVGEDHANRERVAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURMA (Chaperone protein htpG OS=Burkholderia mallei GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 79/194 (40.72%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   E+  ++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETINQASALWTRAKSEVTDEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGVGEDHANRERVAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURM9 (Chaperone protein htpG OS=Burkholderia mallei (strain NCTC 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 79/194 (40.72%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   E+  ++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETINQASALWTRAKSEVTDEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGVGEDHANRERVAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURM7 (Chaperone protein htpG OS=Burkholderia mallei (strain NCTC 10247) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 79/194 (40.72%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   E+  ++Y +FY+   ++  DPLA++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL F+KGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETINQASALWTRAKSEVTDEQYKQFYQHVAHDHQDPLAWTHNRVEGRSEYTQLLFVPSHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFIKGVVDSSDLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWSAFGQVLKEGVGEDHANRERVAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 86/218 (39.45%), Postives = 123/218 (56.42%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMN-PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKE----------------------DYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +WE  N+   +W R  K+I  ++Y +FYK   ++F +PL +SH   EG  E+  +LYIP   P    ++ N  K   ++LYVKRVFI DD +  L P YL FVKGV+DS DLPLNVSRE+LQESR VR++R   V++   M++D+++ +  E                       Y +F+  FG  LK G  ED    +RLA LLRF ++ S+   +S
Sbjct:  231 EWETVNKASALWTRPKKDITDEQYQDFYKSISHDFENPLTWSHNRVEGNTEYTQLLYIPAKAPF---DLWNRDKKAGVKLYVKRVFIMDDAES-LMPSYLRFVKGVIDSADLPLNVSRELLQESRDVRLIRDGSVKRVLSMLEDLAKHDKHEAAAEGADGVQDVVSAEDKAKEGKYTQFYAEFGAVLKEGLGEDFANRERLAKLLRFASTTSDTPSVS 444          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSYIN (Chaperone protein htpG OS=Psychromonas ingrahamii (strain 37) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 78/191 (40.84%), Postives = 120/191 (62.83%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGP--LNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+   +W  +  E++ +EY EFYK   N+F DPL +SH   EGE  + S+LYIP   P  L N E    K   ++LYV+RVF+ DD + +  P YL FVKGV+DS+DLPLNVSREILQ++R+   +R    ++  D++  +++ ++ + Y  FW+ FG+ LK G  EDS   +++  L RF +++++
Sbjct:  233 WEAVNKATALWSCSKSELKDEEYKEFYKHIANDFEDPLTWSHNKVEGEQAYTSLLYIPKRAPYDLWNRE----KAHGLKLYVQRVFVMDDAE-QFMPTYLRFVKGVLDSNDLPLNVSREILQDTRVTAKLRSGCTKRVLDLLTKLAKKDD-DAYNLFWKEFGQVLKEGPAEDSSNKEKIGKLFRFSSTETD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSYA2 (Chaperone protein htpG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 82/198 (41.41%), Postives = 120/198 (60.61%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +WE  N+   +W R   ++E DEY +FYK    +   PL ++H   EG V++  +LYIP   P+  +     +   ++LYVKRVFI DD + +L P YL FVKGV+DS DLPLNVSREILQESR V+ +R    R+   ++  ++ SE+   +E + +F+  FG  +K G  ED G  +R+A LLR+ TS  + E+ S
Sbjct:  251 EWETINKASALWTRTASDVEDDEYVDFYKNITYDMDAPLTWTHNRVEGRVQYTQLLYIPKKAPV--DLYTREQQHGLKLYVKRVFIMDDAE-QLLPMYLRFVKGVIDSADLPLNVSREILQESRDVKSIRDGNARRILTLLASLANSEDADKQEKFAQFYAEFGDVIKEGVGEDMGNQERIAKLLRYATSTQDGEMTS 445          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_BURP64.340e-3740.72Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP14.340e-3740.72Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP04.340e-3740.72Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURMS4.340e-3740.72Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_BURMA4.340e-3740.72Chaperone protein htpG OS=Burkholderia mallei GN=h... [more]
HTPG_BURM94.340e-3740.72Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_BURM74.340e-3740.72Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_ACISJ4.340e-3739.45Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_PSYIN5.668e-3740.84Chaperone protein htpG OS=Psychromonas ingrahamii ... [more]
HTPG_PSYA25.668e-3741.41Chaperone protein htpG OS=Psychrobacter arcticus (... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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