FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_XANCP (Chaperone protein htpG OS=Xanthomonas campestris pv. campestris GN=htpG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 77/184 (41.85%), Postives = 115/184 (62.50%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE+ N    +W R   EI+ +EY EFYK   ++  +PLA+SH   EG++++ S+L++PG  P   +       K ++LYV+RVFI D  + +  P YL F+KGVVDS DL LNVSREILQ   +V  M+  L ++  DM++ +++ +  +DY  FW NFG+ LK G  ED    +++A LLRF
Sbjct:  229 EWEVVNRASALWTRPKSEIKDEEYQEFYKHVAHDAGNPLAWSHNKVEGKLDYTSLLFVPGRAPF--DLYHRDSAKGLKLYVQRVFIMDQAE-QFLPLYLRFIKGVVDSADLSLNVSREILQSGPVVDSMKSALTKRALDMLEKLAK-DKPDDYATFWRNFGQALKEGPAEDYANREKVAGLLRF 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_XANC8 (Chaperone protein htpG OS=Xanthomonas campestris pv. campestris (strain 8004) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 77/184 (41.85%), Postives = 115/184 (62.50%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE+ N    +W R   EI+ +EY EFYK   ++  +PLA+SH   EG++++ S+L++PG  P   +       K ++LYV+RVFI D  + +  P YL F+KGVVDS DL LNVSREILQ   +V  M+  L ++  DM++ +++ +  +DY  FW NFG+ LK G  ED    +++A LLRF
Sbjct:  229 EWEVVNRASALWTRPKSEIKDEEYQEFYKHVAHDAGNPLAWSHNKVEGKLDYTSLLFVPGRAPF--DLYHRDSAKGLKLYVQRVFIMDQAE-QFLPLYLRFIKGVVDSADLSLNVSREILQSGPVVDSMKSALTKRALDMLEKLAK-DKPDDYATFWRNFGQALKEGPAEDYANREKVAGLLRF 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_METPP (Chaperone protein htpG OS=Methylibium petroleiphilum (strain PM1) GN=htpG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 83/194 (42.78%), Postives = 118/194 (60.82%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMN-PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            WE  N+   +W R   EI   EY  FY++  ++   PLAY+H   EG  E+  +LY+P   P    ++ N  +   I+LYVKRVFI DD    L P YL FVKGV+DS DLPLNVSRE+LQESR V+ +R+   ++   M+++++ SE+   ++ Y  FW  FG  LK G  ED    +RLA LLRF +++++E
Sbjct:  227 WETVNKAAALWARPKSEITDAEYKSFYEQFSHDSTPPLAYTHNRVEGRSEYIQLLYLPAKAP---HDLWNRDRQGGIKLYVKRVFIMDDAQA-LMPSYLRFVKGVIDSSDLPLNVSRELLQESRDVKAIREGSTKRVLGMLEEMAGSEDAARRDQYAAFWREFGAVLKEGVGEDHANRERLAKLLRFASTQADE 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HELPY (Chaperone protein htpG OS=Helicobacter pylori GN=htpG PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.402e-37
Identity = 84/193 (43.52%), Postives = 122/193 (63.21%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            E  N+   +W  N  E++  +Y EFY+   ++  +PL+Y H   EG +E+ ++ YIP   P +   +       ++LYVKRVFI+DD D EL P YL FVKGV+DS+DLPLNVSREILQ+++I+  +R   V+K    I+ +S+ E  ++Y KF+E FG+ LK G   D    ++L  LLRFY SK +E+LIS
Sbjct:  230 EQINQASALWKMNKSELKDKDYKEFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSTAPFDMFRV--DYKSGVKLYVKRVFITDD-DKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDE--KNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFY-SKDKEKLIS 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEON (Chaperone protein htpG OS=Shewanella oneidensis GN=htpG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37
Identity = 77/184 (41.85%), Postives = 120/184 (65.22%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W+  N+   +WMRN  EI  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ I + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKAMNKATALWMRNKSEITDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPW---DLWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHELP (Chaperone protein htpG OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37
Identity = 75/191 (39.27%), Postives = 123/191 (64.40%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            W+  N+   +W RN  ++  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++L+V+RVF+ DD + +  P YL FV+G++DS+DLPLNVSREILQ+++I   +R  + ++   M++ +++++  E Y+ FW  FG+ LK G  ED    +++A LLRF ++ + E
Sbjct:  235 WKAMNKATALWTRNKSDVTDEEYQEFYKHISHDFADPLLWSHNRVEGKQEYTSLLYIPSKAPW---DLWNRDRKHGLKLFVQRVFVMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNKITTALRTAVTKRVLGMLEKLAKND-PEKYQTFWAEFGQVLKEGPAEDFANKEKIAGLLRFASTHTNE 420          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HAEPS (Chaperone protein htpG OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37
Identity = 77/193 (39.90%), Postives = 122/193 (63.21%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF---YTSKSEE 721
            WE  N+ + +W R+  EI  +EY EFYK   ++F DPL +SH   EG+ E+ S+LY+P   P   +     +   ++LYV+RVFI DD +    P YL F++G++D++DLPLNVSREILQE+++ + +R  L +++  M++ +++ +N E Y++FW  FG  LK G  ED     ++A L+RF   +T  SE+
Sbjct:  227 WEKINKAQALWTRSKNEISDEEYKEFYKHISHDFADPLIWSHNKVEGKQEYTSLLYVPSKAPW--DLFQREQKHGLKLYVQRVFIMDDVE-VFMPNYLRFMRGLLDTNDLPLNVSREILQENKVTQSLRTALTKRSLQMLEKLAK-DNIEQYQQFWNAFGLVLKEGVGEDFANKNQVAALVRFASTHTDSSEQ 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPA (Chaperone protein htpG OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.263e-36
Identity = 75/191 (39.27%), Postives = 123/191 (64.40%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            W+  N+   +W RN  ++  +EY EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++L+V+RVF+ DD + +  P YL FV+G++DS+DLPLNVSREILQ++++   +R  + ++   M++ +++++  E Y+ FW  FG+ LK G  ED    +R+A LLRF ++ + E
Sbjct:  234 WKPMNKATALWTRNKSDVSDEEYQEFYKHISHDFTDPLLWSHNRVEGKQEYTSLLYIPAKAPW---DMWNRDRKHGLKLFVQRVFVMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALRTAVTKRVLGMLEKLAKND-AEKYQSFWTEFGQVLKEGPAEDFANKERIAGLLRFASTHTGE 419          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_FRAP2 (Chaperone protein htpG OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.263e-36
Identity = 80/189 (42.33%), Postives = 121/189 (64.02%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKS 715
            ++E  N TK IW+R+  E+  +EY EFYK   ++F D L + H   EG +E+ S+LYIP   P +       K   + LYV+RVFI +  + EL P YL FVKGV+DS DLPLNVSREILQ ++++  ++K +  K    ++ ++ S++ E Y+KFW++FG+ LK G  +D    +++A LLRF T++S
Sbjct:  225 EYETVNNTKAIWLRSKDEVTDEEYQEFYKYISHDFADALMWIHNKVEGNLEYNSLLYIPQNKPFDFWN--RDKDYGLSLYVRRVFIME--NKELLPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLA-SKDTEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTES 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURCM (Chaperone protein htpG OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=htpG PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.263e-36
Identity = 79/194 (40.72%), Postives = 122/194 (62.89%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSE---NKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R+  +I  ++Y +FY+   ++  DPL ++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL FVKGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E    KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETVNQASALWTRSKSDITDEQYTQFYQHVAHDHQDPLTWTHNRVEGRSEYTQLLFVPAHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFVKGVVDSADLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEEEAGKEKYKTFWSAFGQVLKEGLGEDHANRERIAKLLRFASTHGDTD 417          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_XANCP7.402e-3741.85Chaperone protein htpG OS=Xanthomonas campestris p... [more]
HTPG_XANC87.402e-3741.85Chaperone protein htpG OS=Xanthomonas campestris p... [more]
HTPG_METPP7.402e-3742.78Chaperone protein htpG OS=Methylibium petroleiphil... [more]
HTPG_HELPY7.402e-3743.52Chaperone protein htpG OS=Helicobacter pylori GN=h... [more]
HTPG_SHEON9.668e-3741.85Chaperone protein htpG OS=Shewanella oneidensis GN... [more]
HTPG_SHELP9.668e-3739.27Chaperone protein htpG OS=Shewanella loihica (stra... [more]
HTPG_HAEPS9.668e-3739.90Chaperone protein htpG OS=Haemophilus parasuis ser... [more]
HTPG_SHEPA1.263e-3639.27Chaperone protein htpG OS=Shewanella pealeana (str... [more]
HTPG_FRAP21.263e-3642.33Chaperone protein htpG OS=Francisella philomiragia... [more]
HTPG_BURCM1.263e-3640.72Chaperone protein htpG OS=Burkholderia ambifaria (... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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