FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURS3 (Chaperone protein htpG OS=Burkholderia sp. (strain 383) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36
Identity = 79/195 (40.51%), Postives = 121/195 (62.05%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLN--NEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSE---NKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R+  E+  ++Y +FY+   ++  DPL ++H   EG  E+  +L++P   P +  N +        ++LYVKRVFI DD + +L P+YL FVKGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E    KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETVNQASALWTRSKSEVSDEQYTQFYQHIAHDHQDPLTWTHNRVEGRSEYTQLLFVPSHAPFDMWNRDYRG----GLKLYVKRVFIMDDAE-QLLPQYLRFVKGVVDSADLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEEDAGKEKYKTFWGAFGQVLKEGLGEDHANRERIAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEAM (Chaperone protein htpG OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 75/184 (40.76%), Postives = 120/184 (65.22%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W+  N+   +W R+  ++  +EY EFYK   ++F DPL +SH   EG  E+ S+LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++++ R +R+ L ++   M++ +++ ++ + Y++FW  FG  LK G  ED    +R+A LLRF
Sbjct:  233 WKAMNKATALWTRSKSDVSDEEYKEFYKHISHDFADPLDWSHNKVEGNQEYTSLLYIPAKAPW---DLWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTRNLRQALTKRVLSMLEKLAK-DDADKYQQFWAEFGTVLKEGPAEDFANRERIAGLLRF 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RUTMC (Chaperone protein htpG OS=Ruthia magnifica subsp. Calyptogena magnifica GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 79/191 (41.36%), Postives = 121/191 (63.35%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            ++E  N+    W ++ ++++++ Y EFYK    +F  PL   H   EG +++ S+L+IP   P    ++  PK K  I+LY KRVFI +D +  L P YL FVKGV+D+ DLPLNVSREILQ +++V  +RK  V +    ++ +++++  EDY+KFW+ FG  +K G VED     ++A LLRF T+KSE
Sbjct:  221 EYERINKANAFWSQDKRDLKQENYDEFYKSLTYDFEAPLTQLHNRVEGNIDYTSLLFIPSKAP---HDMWEPKRKGGIKLYAKRVFIMEDNEA-LMPLYLRFVKGVIDTADLPLNVSREILQGNKVVDTIRKASVSRVLKELEKMAKNK-PEDYEKFWQEFGMVMKEGVVEDFANKDKIAKLLRFTTNKSE 406          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_POLSJ (Chaperone protein htpG OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 83/191 (43.46%), Postives = 118/191 (61.78%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMN-PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N+   +W R  K+I  ++Y EFYK+   +   PLA +H   EG  E+  +L+IP   P+   ++ N  K   ++LYV+RVFI DD    L P YL FVKGVVDS DLPLNVSRE+LQESR V+ +R+   R+   MI+D++ + + + +K F+  FG  LK G  ED    +RLA LLRF +S ++
Sbjct:  230 EWETVNQAAALWTRAKKDITPEQYDEFYKQISYDSQAPLATTHNRVEGGTEYTQLLFIPAKAPM---DLFNRDKAAGVKLYVRRVFIMDDAQA-LMPTYLRFVKGVVDSADLPLNVSRELLQESRAVKAIREGNTRRVLSMIEDLA-ANDADKFKAFYAEFGAVLKEGLGEDFANRERLAKLLRFASSTTD 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PHOPR (Chaperone protein htpG OS=Photobacterium profundum GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 74/191 (38.74%), Postives = 121/191 (63.35%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGP--LNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI ++EY EFY    ++F +PL +SH   EG  ++ S+LY+P   P  +NN +        ++LYV+RVFI DD   +  P YL F++G++DS+DLPLNVSREILQ++++ + +RK   ++   M+  +++++  E Y+ FW  FG+ LK G  ED    +++A LLRF ++ ++
Sbjct:  232 WEQINKAQALWTRNKSEITEEEYKEFYNHVSHDFAEPLTWSHNRVEGTQDYTSLLYVPSKAPWDMNNRD----SKHGLKLYVQRVFIMDDAQ-QFMPSYLRFMRGLIDSNDLPLNVSREILQDNKVTQALRKASTKRALTMLDRMAKND-AEKYQTFWTEFGQVLKEGPAEDFSNREKIANLLRFSSTHND 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BUCAI (Chaperone protein htpG OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=htpG PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36
Identity = 83/189 (43.92%), Postives = 117/189 (61.90%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKS 715
            WE  N+ K +W  N   I ++EY +FYK   N+  DPL +SH   EG  E+ S+LYIP        +I N   K+ ++LYVKRV+I D+    L P YL F+KG++DS DLPLN+SREILQ++ I   +RK L++K+  M++ ++Q +N E Y+ FW  FG  LK G  ED     ++A LLRF + KS
Sbjct:  224 WEQINKAKALWTLNKSSITEEEYKDFYKHLTNDQNDPLIWSHNHVEGNQEYISLLYIPEKAAW---DIWNRDNKHGLKLYVKRVYIMDNSQAFL-PNYLRFIKGLIDSSDLPLNISREILQDNSITEKLRKSLIKKSLSMLEKLAQ-KNNEKYQIFWNQFGLVLKEGPAEDHENLNKIANLLRFTSMKS 407          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HELPH (Chaperone protein htpG OS=Helicobacter pylori (strain HPAG1) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 82/190 (43.16%), Postives = 121/190 (63.68%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            N+   +W  N  E++  +Y +FY+   ++  +PL+Y H   EG +E+ ++ YIP   P +   +       ++LYVKRVFI+DD D EL P YL FVKGV+DS+DLPLNVSREILQ+++I+  +R   V+K    I+ +S+ E  ++Y KF+E FG+ LK G   D    ++L  LLRFY SK +E+LIS
Sbjct:  233 NQASALWKMNKSELKDKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRV--DYKSGVKLYVKRVFITDD-DKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDE--KNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFY-SKDKEKLIS 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HAEI8 (Chaperone protein htpG OS=Haemophilus influenzae (strain 86-028NP) GN=htpG PE=3 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 73/190 (38.42%), Postives = 124/190 (65.26%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N++  +W R+  ++  +EY  FYK   ++F+DP+ ++H   EG   + S+LY+P   P    ++ N + K+ ++LYV+RVFI DD + +  P YL F++G++DS+DLPLNVSREILQ+++I   +RK L +++  M++ +++ ++ E Y KFW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  227 WEKINKSDALWTRSKNDVSDEEYKAFYKHLSHDFVDPVTWAHNKVEGNQAYTSLLYVPAKAPW---DLFNREHKHGLKLYVQRVFIMDDAE-QFMPNYLRFMRGLIDSNDLPLNVSREILQDNKITAALRKALTKRSLQMLEKLAK-DDAEKYLKFWKEFGLVLKEGPAEDFANKETIAKLLRFASTHND 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 78/194 (40.21%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R+  ++  ++Y +FY+   ++  DPL ++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL FVKGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETVNQASALWTRSKSDVTDEQYTQFYQHIAHDHQDPLTWTHNRVEGRSEYTQLLFVPAHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFVKGVVDSADLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWGAFGQVLKEGLGEDHANRERIAKLLRFASTHGDTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 78/194 (40.21%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R+  ++  ++Y +FY+   ++  DPL ++H   EG  E+  +L++P   P    ++ N   +  ++LYVKRVFI DD + +L P+YL FVKGVVDS DLPLNVSREILQESR V+ +R+ + ++   M+++++ +E+   KE YK FW  FG+ LK G  ED    +R+A LLRF ++  + +
Sbjct:  228 ETVNQASALWTRSKSDVTDEQYTQFYQHIAHDHQDPLTWTHNRVEGRSEYTQLLFVPAHAPF---DLWNRDYRGGLKLYVKRVFIMDDAE-QLLPQYLRFVKGVVDSADLPLNVSREILQESRDVKAIREGVTKRALSMLEELANAEDDAGKEKYKTFWGAFGQVLKEGLGEDHANRERIAKLLRFASTHGDTD 417          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_BURS31.649e-3640.51Chaperone protein htpG OS=Burkholderia sp. (strain... [more]
HTPG_SHEAM2.154e-3640.76Chaperone protein htpG OS=Shewanella amazonensis (... [more]
HTPG_RUTMC2.154e-3641.36Chaperone protein htpG OS=Ruthia magnifica subsp. ... [more]
HTPG_POLSJ2.154e-3643.46Chaperone protein htpG OS=Polaromonas sp. (strain ... [more]
HTPG_PHOPR2.154e-3638.74Chaperone protein htpG OS=Photobacterium profundum... [more]
HTPG_BUCAI2.154e-3643.92Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_HELPH2.813e-3643.16Chaperone protein htpG OS=Helicobacter pylori (str... [more]
HTPG_HAEI82.813e-3638.42Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_BURCH2.813e-3640.21Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BURCA2.813e-3640.21Chaperone protein htpG OS=Burkholderia cenocepacia... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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