FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ACTSZ (Chaperone protein htpG OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 81/197 (41.12%), Postives = 123/197 (62.44%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELF-PRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF---YTSKSEEEL 727
            WE  N+ + +W R   EI  +EY EFYK   ++F DPL + H   EG  E+ S+LY+P   P    ++ N + K+ ++LYV+RVFI D  D E+F P YL F++G++DS+DLPLNVSREILQ+++    +RK L +++  M++ +++ E  E Y  FW+ FG  LK G  ED    +++A L RF   +T  SE+ +
Sbjct:  227 WEKINKAQALWTRAKGEISDEEYQEFYKHISHDFADPLVWQHNKVEGNQEYTSLLYVPSKAPW---DLFNREQKHGLKLYVQRVFIMD--DAEVFMPNYLRFMRGLLDSNDLPLNVSREILQDNKTTAALRKALTKRSLQMLEKLAKDE-AEKYATFWKEFGLVLKEGVGEDFANREQIAKLFRFASTHTDSSEQSV 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 73/182 (40.11%), Postives = 116/182 (63.74%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            E  N+   IW +   E+  ++Y+ FY+   +++ +PLA+ H   EG +E+ S+LY+P   P +  +    +   ++LYVKRVFI DD +  L P YL FV+GV+DS+DLPLNVSREILQ +R+V  +R   V++  D +  ++++E++ DY+ FW+ FG  +K G +ED     ++A LLRF
Sbjct:  228 EQVNKATAIWTQPKSELSDEDYNNFYQTISHDYENPLAHIHNKVEGTLEYTSLLYLPKKAPFDLYD--RDRRYGLKLYVKRVFIMDDAE-HLMPTYLRFVRGVIDSNDLPLNVSREILQSNRVVDKIRSASVKRVLDQLAKMAKAEDQSDYETFWDQFGNVMKEGVIEDFANKDKIAKLLRF 406          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HAHCH (Chaperone protein htpG OS=Hahella chejuensis (strain KCTC 2396) GN=htpG PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.798e-36
Identity = 76/192 (39.58%), Postives = 121/192 (63.02%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            ++E  NE   +W     EI+ ++Y EFYK   ++F DPL ++H   EG++++ S+LY+P   P +      P+   ++LY++RVFI DD + +  P YL FVKGVVDS+DL LNVSREILQ  + V  MR  L ++  DM+  ++ +++ E Y+ FW+ FGR LK G  ED    +++A L+RF ++  +++
Sbjct:  235 EFESVNEATALWTLPRNEIKDEDYKEFYKHIAHDFSDPLLWAHNRVEGKLDYTSLLYVPAKAPYDLWNREAPR--GLKLYIQRVFIMDDAE-QFLPLYLRFVKGVVDSNDLSLNVSREILQNDKAVESMRSALTKRVLDMLSKLA-ADDAEKYQSFWDEFGRVLKEGPAEDFINREKIAKLMRFSSTHQDDD 422          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEFN (Chaperone protein htpG OS=Shewanella frigidimarina (strain NCIMB 400) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36
Identity = 75/185 (40.54%), Postives = 120/185 (64.86%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +W++ N+   +W RN  +I ++EY EFYK   +++ D L +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++L+V+RVFI D+ + +  P YL FV+G++DS+DLPLNVSREILQ++++   MR  + ++   M++ +++ E  E Y+ FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  232 EWKVMNKATALWTRNKSDITEEEYQEFYKHISHDYSDALKWSHNRVEGKQEYTSLLYIPAKAPW---DMWNRDHKHGLKLFVQRVFIMDEAE-QFLPTYLRFVRGLIDSNDLPLNVSREILQDNQVTTAMRVGITKRVLGMLEKLAKDE-PEQYQSFWAEFGQVLKEGPAEDFANKERIAGLLRF 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSYCK (Chaperone protein htpG OS=Psychrobacter cryohalolentis (strain K5) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36
Identity = 80/193 (41.45%), Postives = 119/193 (61.66%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N+   +W R+  EIE +EY +FYK    +   PLA++H   EG V++  +LYIP   P+  +     +   ++LYVKRVFI D+ + +L P YL FVKGV+DS DLPLNVSRE+LQESR V+ +R    R+   ++  ++ SE+   +E + +F+  FG  +K G  ED G  +R+A LLR+ TS  +
Sbjct:  261 EWETINKASALWTRSASEIEDEEYIDFYKNITYDMDAPLAWTHNRVEGRVQYTQLLYIPKKAPV--DLYTREQQHGLKLYVKRVFIMDEAE-QLLPMYLRFVKGVIDSADLPLNVSRELLQESRDVKSIRDGNARRILTLLASLANSEDSDKQEKFAQFYAEFGDVIKEGVGEDMGNQERIAKLLRYATSTQD 450          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSEHT (Chaperone protein htpG OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36
Identity = 74/191 (38.74%), Postives = 122/191 (63.87%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMN-PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N    +W R+  E+  DEY EFYK    ++ DPL+++H   EG+ E+ S+LYIP   P    ++ N  +   ++LYV+RVFI DD + +  P YL FVKG++DS+DLPLNVSREILQ++++ + +RK    +   M++ +++++  +DY+ FW  FG+ +K G  ED+   + +  LLRF ++ ++
Sbjct:  232 EWESINRATALWTRDKSELSDDEYKEFYKHVSLDWEDPLSWAHNKVEGKTEYTSLLYIPKKAPF---DLWNRDRQSGLKLYVQRVFIMDDAE-QFMPSYLRFVKGLLDSNDLPLNVSREILQDNKVTQAIRKGCTSRIIKMLERMAKNK-ADDYQVFWNEFGQVIKEGPAEDAANKEAICKLLRFSSTHTD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 74/184 (40.22%), Postives = 121/184 (65.76%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W++ N+   +WMR+  +I  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ + + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKVMNKATALWMRSKADISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPAKAPW---DMWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHVTKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 74/184 (40.22%), Postives = 121/184 (65.76%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W++ N+   +WMR+  +I  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ + + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKVMNKATALWMRSKADISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPAKAPW---DMWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHVTKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB5 (Chaperone protein htpG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 74/184 (40.22%), Postives = 121/184 (65.76%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W++ N+   +WMR+  +I  +EY EFYK   +++ D L +SH   EG+ E+ ++LYIP   P    ++ N   K+ ++L+V+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ++ + + MR  + ++   M++ +++ ++ E Y++FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKVMNKATALWMRSKADISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPAKAPW---DMWNRDRKHGLKLFVQRVFIMDDAE-QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHVTKAMRTGITKRVLGMLEKLAK-DDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRF 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPA (Chaperone protein htpG OS=Legionella pneumophila (strain Paris) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 77/193 (39.90%), Postives = 121/193 (62.69%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            ++E  N+   +W     EI ++EY + YK   ++++DPL +SH   EG+ E+ ++LYIP   P    ++   + K+ ++LYVKRVFI D+   +  PRYL FVKG+VD+ DLPLN+SREILQ+++ V  +R    ++   M++ ++ + +KE Y+KFW  FG  LK G +ED    + +A LLRF T+ S  E
Sbjct:  223 EFETVNKATALWTLQKSEISEEEYKQLYKHISHDYMDPLTWSHNHVEGKHEYITLLYIPAHAPF---DLWQHEAKHGLKLYVKRVFIMDEAT-QFLPRYLRFVKGIVDASDLPLNISREILQDNKQVESIRAACTKRVLSMLEKMA-TNDKETYQKFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSE 410          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_ACTSZ2.813e-3641.12Chaperone protein htpG OS=Actinobacillus succinoge... [more]
HTPG_THICR3.674e-3640.11Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
HTPG_HAHCH4.798e-3639.58Chaperone protein htpG OS=Hahella chejuensis (stra... [more]
HTPG_SHEFN6.266e-3640.54Chaperone protein htpG OS=Shewanella frigidimarina... [more]
HTPG_PSYCK6.266e-3641.45Chaperone protein htpG OS=Psychrobacter cryohalole... [more]
HTPG_PSEHT6.266e-3638.74Chaperone protein htpG OS=Pseudoalteromonas halopl... [more]
HTPG_SHEB98.184e-3640.22Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB88.184e-3640.22Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB58.184e-3640.22Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_LEGPA1.069e-3539.90Chaperone protein htpG OS=Legionella pneumophila (... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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