FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIN (Chaperone protein htpG OS=Haemophilus influenzae GN=htpG PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 72/190 (37.89%), Postives = 124/190 (65.26%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N++  +W R+  ++  +EY  FYK   ++F+DP+ ++H   EG   + S+LY+P   P    ++ N + K+ ++LYV+RVFI DD + +  P YL F++G++DS+DLPLNVSREILQ+++I   +RK L +++  M++ +++ ++ E Y +FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  227 WEKINKSDALWTRSKNDVSDEEYKAFYKHLSHDFVDPVTWAHNKVEGNQAYTSLLYVPAKAPW---DLFNREHKHGLKLYVQRVFIMDDAE-QFIPNYLRFMRGLIDSNDLPLNVSREILQDNKITAALRKALTKRSLQMLEKLAK-DDAEKYLQFWKEFGLVLKEGPAEDFANKETVAKLLRFASTHND 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_COLP3 (Chaperone protein htpG OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 75/191 (39.27%), Postives = 120/191 (62.83%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLN--NEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+   +W R   +I  +EY EFYK   ++F DPL + H   EG+ E+ S+LY+P   P +  N E    K   ++L+V+RVFI DD + +  P YL FVKG++DS+DLPLNVSREILQ++++ + +RK   ++   M++ +  +++ + Y+ FW+ FG+ LK G  ED    +++A LLRF ++  +
Sbjct:  249 WEPVNKATALWTREKADITDEEYKEFYKHVSHDFGDPLLWEHNRVEGKTEYTSLLYVPTKAPFDMYNRE----KQHGLKLFVQRVFIMDDAE-QFMPTYLRFVKGLLDSNDLPLNVSREILQDNKVTQAIRKGCTKRVLKMLEKLG-NKDADKYQGFWDEFGQVLKEGPAEDHANKEQVAGLLRFASTHED 433          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BAUCH (Chaperone protein htpG OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=htpG PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.396e-35
Identity = 77/197 (39.09%), Postives = 121/197 (61.42%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYT--SKSEEELIS 733
            WE  N+ + +W RN  ++   EY +FYK  +++  DP+++SH   EG+ E+ S+LYIP         I N   K  ++LY+KRV I D  D    P YL FVKG++D +DLPLN+SRE+LQ +RI + ++  + ++   M++ ++ ++N E Y+ FW++FG  +K G  ED    + +A LLRF T  SKS E+ +S
Sbjct:  226 WEQINKAQALWTRNKVDVSDQEYKDFYKHLYHDSNDPISWSHNRVEGQQEYTSLLYIPASASWG---IWNRDHKYGLKLYIKRVLIMDHAD-YFLPNYLRFVKGIIDCNDLPLNISREMLQHNRITQNLKNAITKRILSMLEKLA-TQNNEQYQNFWQHFGLVIKEGLAEDPNNSKSIARLLRFSTTHSKSMEQNVS 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIG (Chaperone protein htpG OS=Haemophilus influenzae (strain PittGG) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.823e-35
Identity = 72/190 (37.89%), Postives = 123/190 (64.74%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N++  +W R+  ++  +EY  FYK   ++F DP+ ++H   EG   + S+LY+P   P    ++ N + K+ ++LYV+RVFI DD + +  P YL F++G++DS+DLPLNVSREILQ+++I   +RK L +++  M++ +++ ++ E Y +FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  227 WEKINKSDALWTRSKNDVSDEEYKAFYKHLSHDFSDPVTWAHNKVEGNQAYTSLLYVPAKAPW---DLFNREHKHGLKLYVQRVFIMDDAE-QFMPNYLRFMRGLIDSNDLPLNVSREILQDNKITAALRKALTKRSLQMLEKLAK-DDAEKYLQFWKEFGLVLKEGPAEDFANKETIAKLLRFASTHND 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIE (Chaperone protein htpG OS=Haemophilus influenzae (strain PittEE) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.823e-35
Identity = 72/190 (37.89%), Postives = 123/190 (64.74%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N++  +W R+  ++  +EY  FYK   ++F DP+ ++H   EG   + S+LY+P   P    ++ N + K+ ++LYV+RVFI DD + +  P YL F++G++DS+DLPLNVSREILQ+++I   +RK L +++  M++ +++ ++ E Y +FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  227 WEKINKSDALWTRSKNDVSDEEYKAFYKHLSHDFADPVTWAHNKVEGNQAYTSLLYVPAKAPW---DLFNREHKHGLKLYVQRVFIMDDAE-QFMPNYLRFMRGLIDSNDLPLNVSREILQDNKITAALRKALTKRSLQMLEKLAK-DDAEKYLQFWKEFGLVLKEGPTEDFANKETVAKLLRFASTHND 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ALCBS (Chaperone protein htpG OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.823e-35
Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEEL 727
            E  N    +W R   E+  +EY  FYK   ++F D L +SH   EG++E+ S+LY+P   P   +       + ++LYV+RVFI DD + +  P+YL F+KGV+D+ DLPLNVSRE+LQ+   V+ +R  L ++   M++ +S  +  + Y KFW  FG  +K G  ED    Q +A LLRF TSK+ + +
Sbjct:  224 ETLNSATALWQRPRSEVTDEEYQSFYKHISHDFQDALTWSHNKVEGKLEYTSLLYVPAQAPF--DLYQREANRGLKLYVQRVFIMDDAE-QFLPQYLRFIKGVIDAPDLPLNVSRELLQDYGPVQKIRSALTKRVLQMLKKLSNDD--KQYAKFWAQFGSVIKEGVAEDRDNQQSIAALLRFATSKTPDSV 409          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 79/188 (42.02%), Postives = 116/188 (61.70%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            N  K +W ++  E+ +DEY EFYK   + + DPL       EG  E++++L+IP   P    ++ N   K  ++LYVKRVFI  D D +L P YL FVKGVVD++D+ LNVSREILQ++R +  +R+RL +K    I+D+ Q+E  +DY+ FW  FG+ LK G + DS     L  +  F ++ S+EE
Sbjct:  251 NSMKALWTKSKDEVSEDEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPF---DLFNSDAKIGMQLYVKRVFIMSDCD-QLMPMYLRFVKGVVDAEDMSLNVSREILQQNRQINAIRRRLTKKVLSAIKDL-QAERPQDYRTFWTQFGKVLKEGLMSDSDNRDTLLHISSFASTHSDEE 433          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPH (Chaperone protein htpG OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 76/193 (39.38%), Postives = 121/193 (62.69%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            ++E  N+   +W     EI +++Y + YK   ++++DPL +SH   EG+ E+ ++LYIP   P    ++   + K+ ++LYVKRVFI D+   +  PRYL FVKG+VD+ DLPLN+SREILQ+++ V  +R    ++   M++ ++ + +KE Y+KFW  FG  LK G +ED    + +A LLRF T+ S  E
Sbjct:  223 EFETVNKATALWTLQKSEISEEDYKQLYKHISHDYMDPLTWSHNHVEGKHEYITLLYIPAHAPF---DLWQHEAKHGLKLYVKRVFIMDEAT-QFLPRYLRFVKGIVDASDLPLNISREILQDNKQVESIRAACTKRVLSMLEKMA-TNDKETYQKFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSE 410          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPC (Chaperone protein htpG OS=Legionella pneumophila (strain Corby) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 76/193 (39.38%), Postives = 121/193 (62.69%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            ++E  N+   +W     EI +++Y + YK   ++++DPL +SH   EG+ E+ ++LYIP   P    ++   + K+ ++LYVKRVFI D+   +  PRYL FVKG+VD+ DLPLN+SREILQ+++ V  +R    ++   M++ ++ + +KE Y+KFW  FG  LK G +ED    + +A LLRF T+ S  E
Sbjct:  223 EFETVNKATALWTLQKSEISEEDYKQLYKHISHDYMDPLTWSHNHVEGKHEYITLLYIPAHAPF---DLWQHEAKHGLKLYVKRVFIMDEAT-QFLPRYLRFVKGIVDASDLPLNISREILQDNKQVESIRAACTKRVLSMLEKMA-TNDKETYQKFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSE 410          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.110e-35
Identity = 79/200 (39.50%), Postives = 123/200 (61.50%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSEN---KEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKS--EEELIS 733
            +WE  N+   +W R   ++  ++Y  FY+   +E   PLA++H   EG  E+  +LY+P   P +  +    +   ++LYVKRVFI DD + +L P YL FVKGV+DS DLPLNVSREILQESR V+ +R+   ++   M++ ++ S++   K+ Y  FW++FG+ LK G  ED     R+A LLRF ++ +  +E+ +S
Sbjct:  228 EWETINQASALWARPRADVTDEQYIAFYQHIAHEQGQPLAWTHNRVEGRSEYTQLLYLPTNAPFDLWD--RERRSGLKLYVKRVFIMDDAE-QLLPAYLRFVKGVIDSADLPLNVSREILQESRDVKAIREGSTKRVLGMLESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFANKDRIAKLLRFASTHNAGDEQTVS 424          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_HAEIN1.069e-3537.89Chaperone protein htpG OS=Haemophilus influenzae G... [more]
HTPG_COLP31.069e-3539.27Chaperone protein htpG OS=Colwellia psychrerythrae... [more]
HTPG_BAUCH1.396e-3539.09Chaperone protein htpG OS=Baumannia cicadellinicol... [more]
HTPG_HAEIG1.823e-3537.89Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_HAEIE1.823e-3537.89Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_ALCBS1.823e-3539.27Chaperone protein htpG OS=Alcanivorax borkumensis ... [more]
HTPG_MYCLE2.381e-3542.02Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]
HTPG_LEGPH2.381e-3539.38Chaperone protein htpG OS=Legionella pneumophila s... [more]
HTPG_LEGPC2.381e-3539.38Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_RALSO3.110e-3539.50Chaperone protein htpG OS=Ralstonia solanacearum G... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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