FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_COXBN (Chaperone protein htpG OS=Coxiella burnetii (strain Dugway 5J108-111) GN=htpG PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.110e-35
Identity = 74/191 (38.74%), Postives = 122/191 (63.87%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPK-TKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E+ N    +W+    +I+ +EY E YK   ++F DPLA+ H   EG++E+ ++LYIP   P    +I N +  + ++LYVKR+FI DD +    P YL FVKG+VDS+DLPLN+SRE+LQ + ++  ++   V++   +++D+++++ KE Y  FW+ FG+ LK G  ED     R+A LLRF ++ ++ +
Sbjct:  233 EVVNRANALWVLPKDKIKDEEYKELYKHIAHDFEDPLAWVHNKVEGKLEYTTLLYIPARAPF---DIWNREGQRGLKLYVKRIFIMDDAE-HFMPMYLRFVKGIVDSNDLPLNISRELLQSNEVINKIKAGCVKRILSLLEDLAKND-KEKYASFWKAFGQVLKEGPAEDFANRDRIANLLRFASTHNDTD 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RALEH (Chaperone protein htpG OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 80/193 (41.45%), Postives = 119/193 (61.66%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKED---YKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N+   +W R   +I  ++Y  FY+   ++   PLA++H   EG  E+  +LYIP   P +  +  N K   ++LYVKRVFI DD D +L P YL +VKGVVDS DLPLNVSRE+LQESR V+ +R+   ++   M++ ++ SE + +   Y  FW+ FG+ LK G  ED    +R+A LLRF ++ ++
Sbjct:  228 EWESVNQASALWTRAKSDITDEQYTAFYQHIAHDNEAPLAWTHNRVEGRSEYTQLLYIPARAPFDLWD-RNHKA-GLKLYVKRVFIMDDAD-QLLPGYLRWVKGVVDSADLPLNVSRELLQESRDVKAIREGCTKRVLSMLETLADSEEEAERAKYTTFWQQFGQALKEGIGEDQANLERVAKLLRFASTHND 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NOCFA (Chaperone protein htpG OS=Nocardia farcinica GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 75/188 (39.89%), Postives = 114/188 (60.64%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEEL 727
            N  K +W R   E+  +EY EFYK   + + +PL       EG  E++++L++P   P   +       + ++LYVKRVFI D+ + EL P YL FVKGVVD+ DL LNVSREILQ+ R ++++RKRLV+K    ++D+ Q+E++  Y+ FW  FGR LK G + D    + +  +  F ++ S+ EL
Sbjct:  243 NSRKALWTRPRGEVSDEEYKEFYKHVSHAWDEPLEIIPLKAEGTFEYQALLFLPSQAPF--DLFTREHKRGVQLYVKRVFIMDNCE-ELMPEYLRFVKGVVDAQDLSLNVSREILQQDRQIQMIRKRLVKKVLATVKDLQQAEDQSKYQTFWREFGRVLKEGLLSDFDNRETILQVSSFASTHSDSEL 427          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 81/190 (42.63%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R  +E+ + EY EFYK   + + DPL       EG  E++++L+IP   P +  +        I+LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R ++ +R+RL +K    I+D+ QS   EDY+ FW  FGR LK G + D    + L  +  F ++ SEEE
Sbjct:  242 ETLNSMKALWARPKEEVSEQEYKEFYKHVAHAWDDPLEIIAMKAEGTFEYQALLFIPSHAPFDLFD--RDAHVGIQLYVKRVFIMGDCD-QLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKDV-QSSRPEDYRTFWTQFGRVLKEGLLSDIDNRETLLGISSFVSTYSEEE 427          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 81/190 (42.63%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R  +E+ + EY EFYK   + + DPL       EG  E++++L+IP   P +  +        I+LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R ++ +R+RL +K    I+D+ QS   EDY+ FW  FGR LK G + D    + L  +  F ++ SEEE
Sbjct:  242 ETLNSMKALWARPKEEVSEQEYKEFYKHVAHAWDDPLEIIAMKAEGTFEYQALLFIPSHAPFDLFD--RDAHVGIQLYVKRVFIMGDCD-QLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKDV-QSSRPEDYRTFWTQFGRVLKEGLLSDIDNRETLLGISSFVSTYSEEE 427          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 81/191 (42.41%), Postives = 114/191 (59.69%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R   E+ ++EY EFYK   + + DPL       EG  E++++L+IP   P    ++ N      I+LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R ++ +R+RL +K    I+++ QSE  +DY+ FW  FGR +K G + D    + L  L  F ++ SEEE
Sbjct:  241 ETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPF---DLFNRDAHTGIQLYVKRVFIMGDCD-QLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKEL-QSERLDDYRTFWTQFGRVVKEGLLSDFDNQETLVQLCSFASTHSEEE 426          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBP (Chaperone protein htpG OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 81/190 (42.63%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R  +E+ + EY EFYK   + + DPL       EG  E++++L+IP   P +  +        I+LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R ++ +R+RL +K    I+D+ QS   EDY+ FW  FGR LK G + D    + L  +  F ++ SEEE
Sbjct:  242 ETLNSMKALWARPKEEVSEQEYKEFYKHVAHAWDDPLEIIAMKAEGTFEYQALLFIPSHAPFDLFD--RDAHVGIQLYVKRVFIMGDCD-QLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKDV-QSSRPEDYRTFWTQFGRVLKEGLLSDIDNRETLLGISSFVSTYSEEE 427          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBO (Chaperone protein htpG OS=Mycobacterium bovis GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 81/190 (42.63%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R  +E+ + EY EFYK   + + DPL       EG  E++++L+IP   P +  +        I+LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R ++ +R+RL +K    I+D+ QS   EDY+ FW  FGR LK G + D    + L  +  F ++ SEEE
Sbjct:  242 ETLNSMKALWARPKEEVSEQEYKEFYKHVAHAWDDPLEIIAMKAEGTFEYQALLFIPSHAPFDLFD--RDAHVGIQLYVKRVFIMGDCD-QLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKDV-QSSRPEDYRTFWTQFGRVLKEGLLSDIDNRETLLGISSFVSTYSEEE 427          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 81/191 (42.41%), Postives = 114/191 (59.69%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R   E+ ++EY EFYK   + + DPL       EG  E++++L+IP   P    ++ N      I+LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R ++ +R+RL +K    I+++ QSE  +DY+ FW  FGR +K G + D    + L  L  F ++ SEEE
Sbjct:  241 ETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPF---DLFNRDAHTGIQLYVKRVFIMGDCD-QLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKEL-QSERPDDYRTFWTQFGRVVKEGLLSDFDNQETLLQLCSFASTHSEEE 426          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPL (Chaperone protein htpG OS=Legionella pneumophila (strain Lens) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 75/193 (38.86%), Postives = 121/193 (62.69%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            ++E  N+   +W     EI +++Y + YK   ++++DPL +SH   EG+ E+ ++LYIP   P    ++   + K+ ++LYVKRVFI D+   +  PRYL F+KG+VD+ DLPLN+SREILQ+++ V  +R    ++   M++ ++ + +KE Y+KFW  FG  LK G +ED    + +A LLRF T+ S  E
Sbjct:  223 EFETVNKATALWTLQKSEIGEEDYKQLYKHISHDYMDPLTWSHNHVEGKHEYITLLYIPAHAPF---DLWQHEAKHGLKLYVKRVFIMDEAT-QFLPRYLRFIKGIVDASDLPLNISREILQDNKQVESIRAACTKRVLSMLEKMA-TNDKETYQKFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSE 410          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_COXBN3.110e-3538.74Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_RALEH5.305e-3541.45Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]
HTPG_NOCFA5.305e-3539.89Chaperone protein htpG OS=Nocardia farcinica GN=ht... [more]
HTPG_MYCTU5.305e-3542.63Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA5.305e-3542.63Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCPA5.305e-3542.41Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_MYCBP5.305e-3542.63Chaperone protein htpG OS=Mycobacterium bovis (str... [more]
HTPG_MYCBO5.305e-3542.63Chaperone protein htpG OS=Mycobacterium bovis GN=h... [more]
HTPG_MYCA15.305e-3542.41Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_LEGPL5.305e-3538.86Chaperone protein htpG OS=Legionella pneumophila (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
back to top