FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP2 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=htpG PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34
Identity = 77/198 (38.89%), Postives = 126/198 (63.64%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELF-PRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSK--SEEELIS 733
            WE  N+ + +W R+  EI  +EY EFYK   +++ D L ++H   EG+ E+ S+LY+P   P    ++ N   K+ ++LYV+RVFI D  D E+F P YL F++G++D++DLPLNVSREILQE++I   +R  L ++   +++ +++ +++  Y+ FW  FG  LK G  ED    Q++A L RF +++  S E+ +S
Sbjct:  225 WEKINKAQALWTRSKNEISDEEYQEFYKHLSHDYNDSLIWAHNKVEGKQEYTSLLYVPAKAPW---DLFNRDQKHGLKLYVQRVFIMD--DAEVFMPNYLRFMRGLLDTNDLPLNVSREILQENKITASLRAALTKRALQLLEKLAK-DDQAKYQTFWNEFGLVLKEGVGEDFANKQQIASLFRFASTQTDSSEQTVS 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_WOLSU (Chaperone protein htpG OS=Wolinella succinogenes GN=htpG PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.633e-34
Identity = 76/193 (39.38%), Postives = 120/193 (62.18%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            E  N+   +W  +  E+++++Y EFYK   ++  DPLA+ H   EG  E+ ++ Y+P   P +   +       ++LYVKRVFI+DD D EL P YL FV+G++DS+DLPLNVSREILQ++RI+  ++    +K    I+++++ E K  Y+ F++ FGR LK G   D    ++L  L+RF++S S  + IS
Sbjct:  220 EQVNKAFALWRISKNELKEEDYKEFYKSLSHDSHDPLAWVHIKVEGSQEYTTLFYLPSKAPFDLYRV--DYRSGVKLYVKRVFITDD-DKELLPSYLRFVRGIIDSEDLPLNVSREILQQNRILANIKSASTKKILAEIENLAKDEEK--YEAFFKEFGRALKEGLYGDFENKEKLLELMRFHSSLSPNKKIS 407          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.633e-34
Identity = 74/184 (40.22%), Postives = 117/184 (63.59%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            W+  N+   +W RN  +I  +EY EFYK   +++ D L +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++L+V+RVFI D+ + +  P YL FV+G++DS+DLPLNVSREILQ++++   MR  + ++   M++ +++ E  + Y+ FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  233 WKPMNKATALWTRNKSDISDEEYQEFYKHISHDYTDALKWSHNRVEGKQEYTSLLYIPAKAPW---DMWNRDHKHGLKLFVQRVFIMDEAE-QFLPNYLRFVRGLLDSNDLPLNVSREILQDNQVTTAMRVGVTKRVLGMLEKLAKDEPGQ-YQSFWAEFGQVLKEGPAEDFANKERIAGLLRF 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCUA (Chaperone protein htpG OS=Mycobacterium ulcerans (strain Agy99) GN=htpG PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.633e-34
Identity = 79/190 (41.58%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R   E+  DEY+EFYK   + + DP+       EG  E++++L+IP      ++         I+LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R ++ +R+RL +K    I+D+ QSE  EDY+ FW  FG+ +K G + D    + L  +  F ++ SEEE
Sbjct:  242 ETLNSMKALWARPKDEVSADEYNEFYKHIAHAWDDPMEVIAMKAEGTFEYQALLFIPSHA--QHDLFNRDAVFGIQLYVKRVFIMGDCD-QLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKDL-QSERPEDYRTFWTQFGKVVKEGLLADFDNRETLLEISSFASTHSEEE 427          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_GEOMG (Chaperone protein htpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.633e-34
Identity = 79/188 (42.02%), Postives = 116/188 (61.70%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            E  N  K IW R   E+ ++EY EFYK   ++F  PL   H++ EG  EF+++LY+P   P   +  M  + K ++LYV+RVFI+D  + +L P YL FVKGVVDS DLPLNVSREILQE   ++ ++K LV K    + ++ + E  +DY  F++ FG+ LK G   D    ++L  LL F ++++E
Sbjct:  238 ETLNSMKAIWARAKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGVSEFKALLYLPAHKPF--DLFMPERKKGVQLYVRRVFITDSCE-QLIPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVSKIISTLSEMREKE-ADDYLAFYKEFGQVLKEGVHFDYANREKLQDLLLFESTRTE 421          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BORAP (Chaperone protein htpG OS=Borrelia afzelii (strain PKo) GN=htpG PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.633e-34
Identity = 73/186 (39.25%), Postives = 117/186 (62.90%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            E  NET  +W +N  EI+ +EY+EFYK T  ++ +PL Y H   EG +E+ ++ YIP   P    ++  P TK  ++L++ R+FI+D  +G L P YL F+KG++D  DLPLNVSREILQ+++I+  ++   V+K    ++ +S+ +N E + +F + FGR +K G   D    ++L  L+RF +S
Sbjct:  222 EKLNETTALWTKNKSEIKTEEYNEFYKNTTFDYENPLMYIHTKAEGNLEYTNLFYIPSKAPY---DLYYPNTKPGVKLFINRIFITDS-EGSLLPNYLRFIKGIIDCQDLPLNVSREILQQNKILSKIKSSSVKKILSELEKLSK-KNPEKFSEFSKEFGRCIKEGVYSDFENREKLISLIRFKSS 402          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBFI (Chaperone protein htpG (Fragment) OS=Vibrio fischeri GN=htpG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.439e-34
Identity = 71/167 (42.51%), Postives = 111/167 (66.47%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLG 649
            WE  N+ + +W R+  +IE  EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++MN   K+ ++LYV+RVFI DD + +  P YL FVKG++DS+DLPLNVSREILQ++++ + +R    ++   M++ +++ ++ E Y  FW+ FG+ LK G
Sbjct:  230 WEQVNKAQALWTRSKSDIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPF---DMMNRDHKSGLKLYVQRVFIMDDAE-QFMPTYLRFVKGLIDSNDLPLNVSREILQDNKVTQSLRSACTKRVLGMLEKMAKKDD-EKYLTFWKQFGQVLKEG 391          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BUCAP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Schizaphis graminum GN=htpG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.439e-34
Identity = 83/197 (42.13%), Postives = 123/197 (62.44%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYT--SKSEEELIS 733
            WE  N+ K +W +N   I + EY EFYK   N+  +PL +SH   EG  E+ S+L+IP        +I N   K+ ++LYVKRV+I D+    L P YL F++G++DS++LPLNVSREILQ++ I + ++K L++++  M+Q +S+ +N E Y+ FW  FG  LK G  EDS     +A LLRF +  + S E+ IS
Sbjct:  225 WEKINKAKALWTQNKATISEKEYQEFYKHLTNDQNNPLFWSHNHVEGINEYISLLFIPEKAAW---DIWNRDNKSGLKLYVKRVYIMDNSQAFL-PNYLRFIRGLIDSNNLPLNVSREILQDNSITQNLKKALIKRSLKMLQTLSKKDN-EKYQIFWNQFGSVLKEGPAEDSNNLNLIASLLRFTSIQNNSSEQNIS 416          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BORGA (Chaperone protein htpG OS=Borrelia garinii GN=htpG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.439e-34
Identity = 73/186 (39.25%), Postives = 117/186 (62.90%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            E  NET  +W +N  EI+ +EY+EFYK T  ++ +PL + H   EG +E+ ++ YIP   P    ++  P TK  ++L++ R+FI+D  +G L P YL F+KG++D  DLPLNVSREILQ+++I+  ++   V+K    ++ +S+ +N E + KF + FGR +K G   D    ++L  L+RF +S
Sbjct:  222 EKLNETTALWTKNKSEIKAEEYNEFYKNTTFDYENPLMHVHTKAEGNLEYTNLFYIPSKAPY---DLYYPNTKPGVKLFINRIFITDS-EGSLLPNYLRFIKGIIDCQDLPLNVSREILQQNKILSKIKSSSVKKILSELEKLSK-KNPEKFSKFSKEFGRCIKEGVYSDFENREKLISLIRFKSS 402          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SALAI (Chaperone protein htpG OS=Salinispora arenicola (strain CNS-205) GN=htpG PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.865e-34
Identity = 73/178 (41.01%), Postives = 112/178 (62.92%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPK-TKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLL 694
            N  K +W R   E+E  EYHEFYK   +++ DPL   H   EG  E+ ++L++P   PL   ++ +P+  + ++LYVKRVFI DD +  L P YL FVKGVVD+ DL LN+SRE+LQ+ R ++++R+RLV+K    ++D+ ++   E Y+ FW  FG  +K G ++D+     L  +L
Sbjct:  234 NSMKALWARPRDEVEPAEYHEFYKHVSHDWADPLEVVHMRGEGTFEYEALLFLPTHAPL---DLFSPQGRRGVQLYVKRVFIMDDCEA-LMPGYLRFVKGVVDAHDLSLNISRELLQQDRQIQVVRRRLVKKVLATVKDL-KANQPEKYRTFWTEFGAVVKEGLIDDTENRDSLLEIL 406          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_ACTP22.016e-3438.89Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_WOLSU2.633e-3439.38Chaperone protein htpG OS=Wolinella succinogenes G... [more]
HTPG_SHEDO2.633e-3440.22Chaperone protein htpG OS=Shewanella denitrificans... [more]
HTPG_MYCUA2.633e-3441.58Chaperone protein htpG OS=Mycobacterium ulcerans (... [more]
HTPG_GEOMG2.633e-3442.02Chaperone protein htpG OS=Geobacter metallireducen... [more]
HTPG_BORAP2.633e-3439.25Chaperone protein htpG OS=Borrelia afzelii (strain... [more]
HTPG_VIBFI3.439e-3442.51Chaperone protein htpG (Fragment) OS=Vibrio fische... [more]
HTPG_BUCAP3.439e-3442.13Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_BORGA3.439e-3439.25Chaperone protein htpG OS=Borrelia garinii GN=htpG... [more]
HTPG_SALAI5.865e-3441.01Chaperone protein htpG OS=Salinispora arenicola (s... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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