FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_METPB (Chaperone protein htpG OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=htpG PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33
Identity = 75/186 (40.32%), Postives = 117/186 (62.90%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQ-SENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            E AN    +W +   EI +++Y EFY+   + F +P A  H+  EG +EF  +L++P M P    E  + +   +RL+V+R+FI+D+   EL P +L FV GVVD+DDLPLNVSRE+LQ +  ++ +R+ +  +  + + + S+ +E  +DY+KF+ENFG  LK G  ED  +   +APLLRF +S
Sbjct:  221 EAANRGTALWRKPKSEITEEQYKEFYRTVSHGFDEPWATLHWRAEGALEFTGLLFVPSMKPFMPVE--DDRRSKVRLHVRRMFITDE--AELLPNWLRFVHGVVDTDDLPLNVSREMLQSTPTLQKIRRAVTTRVINELSNRSKNTEKADDYQKFFENFGSVLKEGIYEDFERRAEIAPLLRFRSS 402          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCGI (Chaperone protein htpG OS=Mycobacterium gilvum (strain PYR-GCK) GN=htpG PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33
Identity = 76/187 (40.64%), Postives = 111/187 (59.36%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            N  K +W R   E+  +EY EFYK   + + +PL       EG  E++++L+IP   P   +      T  ++LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R +R +R+RL +K    I ++ Q+E  E Y+ FW  FGR LK G + D+   + L  +  F +++S++E
Sbjct:  245 NSMKALWARPRDEVSDEEYTEFYKHVAHAWDEPLETIAMRAEGTFEYQALLFIPSHAPF--DLFQQNATVGVQLYVKRVFIMGDCD-QLMPPYLRFVKGVVDAQDMSLNVSREILQQDRQIRAIRRRLTKKVLSTIAEM-QAERPEKYRTFWTQFGRVLKEGLLSDTDNQETLLRVSSFASTRSDDE 427          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_METC4 (Chaperone protein htpG OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=htpG PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 75/186 (40.32%), Postives = 116/186 (62.37%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQ-SENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            E AN    +W +   EI +++Y EFY+   + F +P A  H+  EG +EF  +L++P M P    E  + +   +RL+V+R+FI+D+   EL P +L FV GVVD+DDLPLNVSRE+LQ +  ++ +R+ +  +  + +   S+ +E  E+Y+KF+ENFG  LK G  ED  +   +APLLRF +S
Sbjct:  221 EAANRGTALWRKPKSEITEEQYKEFYRTVSHGFDEPWATLHWRAEGALEFTGLLFVPSMKPFMPME--DDRRSKVRLHVRRMFITDE--AELLPNWLRFVHGVVDTDDLPLNVSREMLQSTPTLQKIRRAVTTRVINELSSRSKNTEKAEEYQKFFENFGPVLKEGIYEDFERRAEIAPLLRFRSS 402          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.469e-33
Identity = 77/188 (40.96%), Postives = 113/188 (60.11%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            E  N  K IW R+  E+ ++EY EFYK   ++F  PL   H++ EG  EF+++LY+P   P   +  M  + K ++LYV+RVFI+D  + +L P YL FVKGVVDS DLPLNVSREILQE   ++ ++K LV K    + ++ + E  + Y  F++ FG  LK G   D     +L  LL F ++ ++
Sbjct:  238 ETLNSMKAIWTRSKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGTSEFKALLYLPAHKPF--DLFMPERKKGVQLYVRRVFITDSCE-QLLPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVSKILSTLSEMREKE-ADSYLDFYKEFGPVLKEGVHFDYANRDKLQDLLLFESTATD 421          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_METEP (Chaperone protein htpG OS=Methylobacterium extorquens (strain PA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.106e-32
Identity = 75/186 (40.32%), Postives = 116/186 (62.37%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQ-SENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            E AN    +W +   EI +++Y EFY+   + F +P A  H+  EG +EF  +L++P M P    E  + +   +RL+V+R+FI+D+   EL P +L FV GVVD+DDLPLNVSRE+LQ +  ++ +R+ +  +  + +   S+ +E  E+Y+KF+ENFG  LK G  ED  +   +APLLRF +S
Sbjct:  221 EAANRGTALWRKPKSEITEEQYKEFYRTVSHGFDEPWATLHWRAEGALEFTGLLFVPSMKPFMPME--DDRRSKVRLHVRRMFITDE--AELLPNWLRFVHGVVDTDDLPLNVSREMLQSTPTLQKIRRAVTTRVINELSSRSKNAEKAEEYQKFFENFGPVLKEGIYEDFERRGEIAPLLRFRSS 402          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RHIME (Chaperone protein htpG OS=Rhizobium meliloti GN=htpG PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.445e-32
Identity = 72/183 (39.34%), Postives = 115/183 (62.84%), Query Frame = 2
Query:  179 IWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            +W +   EI KD+Y +FY+    ++ +P    HF  EG  E+ ++ ++PG  P    ++ +P  K  ++LYVKRVFI+D+   EL PRYL FV+G+VD+ DLPLNVSRE++QES ++  +RK L  +    I+ +++S++ E + K WENFG  +K G  ED  +  +L  L RF T+  +++
Sbjct:  233 LWTKQKSEISKDDYTDFYRGVAGQYDEPALTVHFRAEGRHEYTALAFVPGSKPF---DLFDPDRKGRMKLYVKRVFITDE--AELLPRYLRFVRGLVDTADLPLNVSREMIQESPLLANIRKGLTNRVLTSIEKLAESDS-EAFAKIWENFGSVIKEGIYEDFERRGQLLALSRFRTTADDDK 409          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RHILO (Chaperone protein htpG OS=Rhizobium loti GN=htpG PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.445e-32
Identity = 74/181 (40.88%), Postives = 113/181 (62.43%), Query Frame = 2
Query:  179 IWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            +W+R   EI+ +EY +FY+    ++ +P A  HF  EG  E+  + ++PG  P +  +    +   ++LYV+RVFI+DD D  L PRYL FV+G+VDS DLPLNVSRE++QES ++  +RK L  +    +  ++++E  E Y K WENFG  LK G  ED  + ++L  L RF+++ S E
Sbjct:  231 LWVRPKSEIKPEEYTDFYRSVAGQYDEPAATIHFRAEGRQEYSVLAFVPGSRPFDLFD--QDRKGRMKLYVRRVFITDDAD--LLPRYLRFVRGLVDSADLPLNVSREMIQESPLLASIRKGLTNRVLGDLAKLAENE-AEAYAKVWENFGVVLKEGLYEDYERREQLLKLARFHSTASGE 406          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_MYCVP (Chaperone protein htpG OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.445e-32
Identity = 78/191 (40.84%), Postives = 111/191 (58.12%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R   E+  +EY EFYK   + + +PL       EG  E++++L+IP   P    ++ N      ++LYVKRVFI  D D +L P YL FVKGVVD+ D+ LNVSREILQ+ R +R +R+RL +K    I ++ Q+E  E Y+ FW  FGR LK G + D    + L  +  F ++ SE+E
Sbjct:  242 ETLNSMKALWARPRDEVSDEEYTEFYKHVAHAWDEPLEVIAMKAEGTFEYQALLFIPSHAPF---DLFNQNAAVGVQLYVKRVFIMGDCD-QLMPPYLRFVKGVVDAQDMSLNVSREILQQDRQIRAIRRRLTKKVLSTITEM-QTERPEKYRTFWTQFGRVLKEGLLTDIENQETLLRVCSFASTHSEDE 427          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_STRCO (Chaperone protein htpG OS=Streptomyces coelicolor GN=htpG PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.887e-32
Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N  K +W R   E+  DEYHE YK   +++ DPL       EG  E++++L++P   P  ++       + ++LYVKRVFI DD + EL P +L FVKGVVD+ DL LNVSREILQ+ R +R++++RL +K    ++D+  S   + Y  FW  FG  LK G V DS     +     F ++   EE
Sbjct:  234 ETLNSMKALWARPRDEVSDDEYHELYKHIAHDWRDPLETIRLQAEGTFEYQALLFVPSHAP--HDLFTQGYQRGVQLYVKRVFIMDDCE-ELLPPHLRFVKGVVDAQDLSLNVSREILQQDRHIRMIQRRLTKKVLSTVKDLRTSA-PDRYATFWREFGAVLKEGLVTDSDNRDAILAACSFASTHDAEE 419          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_METRJ (Chaperone protein htpG OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=htpG PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.203e-32
Identity = 73/188 (38.83%), Postives = 116/188 (61.70%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            E AN+   +W +   E+ +++Y EFY      F  P A  H+  EG++EF ++L+IPG  P   + + N +   +RL+V+R+FI+D  + EL P +L FV+GVVD++DLPLNVSRE+LQ +  +  +R+ +  +    +   +++++ E Y+ FWENFG  LK G  ED  +   +APLLRF +S  E
Sbjct:  216 ESANQGTALWRKAKSEVTEEQYEEFYHSIGMNFDKPWATLHWRAEGQLEFSALLFIPGSKPF--QALENERQSKVRLHVRRMFITD--EAELLPPWLRFVQGVVDTEDLPLNVSREMLQSTPALARIRRAVTGRVVSEL--TTRAKDAEGYQSFWENFGPVLKEGIYEDFERRGEIAPLLRFRSSAVE 397          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_METPB3.802e-3340.32Chaperone protein htpG OS=Methylobacterium populi ... [more]
HTPG_MYCGI4.965e-3340.64Chaperone protein htpG OS=Mycobacterium gilvum (st... [more]
HTPG_METC48.469e-3340.32Chaperone protein htpG OS=Methylobacterium chlorom... [more]
HTPG_GEOSL8.469e-3340.96Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_METEP1.106e-3240.32Chaperone protein htpG OS=Methylobacterium extorqu... [more]
HTPG_RHIME1.445e-3239.34Chaperone protein htpG OS=Rhizobium meliloti GN=ht... [more]
HTPG_RHILO1.445e-3240.88Chaperone protein htpG OS=Rhizobium loti GN=htpG P... [more]
HTPG_MYCVP1.445e-3240.84Chaperone protein htpG OS=Mycobacterium vanbaaleni... [more]
HTPG_STRCO1.887e-3239.47Chaperone protein htpG OS=Streptomyces coelicolor ... [more]
HTPG_METRJ4.203e-3238.83Chaperone protein htpG OS=Methylobacterium radioto... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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