FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SULDN (Chaperone protein htpG OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.711e-30
Identity = 68/189 (35.98%), Postives = 109/189 (57.67%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELI 730
            N    +W  +  EI  +EY +FY    +   +PLA+ H   EG +E+ ++ YIP   P++   +       I+LY+ RVFI+DD + EL P YL F++GV+DS DLPLNVSREILQ + ++  ++   V+K    +  +++ + K+ Y  F+  FG  LK G   D G  + +  LL+F T  S+E+++
Sbjct:  235 NRANALWTISKNEISDEEYKDFYSSIAHSSEEPLAWMHNKAEGAIEYTTLFYIPSKAPMDMYRV--DYQTGIKLYINRVFITDD-EKELMPTYLRFLRGVIDSKDLPLNVSREILQSNAVMAKIKNASVKKVLSELAKMAKRDAKK-YDDFFTQFGNVLKEGLYSDYGNRENILELLKFNTINSDEKIM 419          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CHLTE (Chaperone protein htpG OS=Chlorobium tepidum GN=htpG PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.550e-29
Identity = 73/189 (38.62%), Postives = 112/189 (59.26%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNP---KTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            N    +W R   E++++E +EFYK   N+F DPL Y H + EG V F+++L+IP   P+  E + N    + +  +LYVK+V I  +   +L P YL FV GVVD++DLPLNVSRE++Q S ++  +++ L  K       I++ E  E ++ F++ FG  LK+G   D     +L  LLRF T+K+ E
Sbjct:  224 NSMTALWQRPKSELKQEEVNEFYKFIANDFKDPLDYLHVSVEGAVSFKALLFIPSEAPM--ELLYNQGALEKRGPQLYVKKVLIQHEC-RDLLPEYLRFVSGVVDTEDLPLNVSRELVQASPVMAKIKQILTTKLLGWFDTIAK-EEPEKFRAFYKAFGTILKIGLNTDFTNRDKLIDLLRFETTKTVE 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CAMHC (Chaperone protein htpG OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.550e-29
Identity = 70/186 (37.63%), Postives = 111/186 (59.68%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            N+   +W      +++ +Y +FYK+  ++  DPL Y H   EG  E+ ++ ++P + P +   +       ++LYVKRVFI+DD   EL P YL FV+G++D +DLPLNVSREILQE+RI++ ++   V+K    ++ I  S+ KE Y KF++ FG+ LK G    S +   +  L  F +SK+ E
Sbjct:  227 NKANALWRLPKSNLKEQDYFDFYKQISHDSSDPLLYIHTKAEGVHEYTTLFFVPSVQPFDLFRV--DYQSGVKLYVKRVFITDDAK-ELLPPYLRFVRGIIDIEDLPLNVSREILQENRIMQTVKAASVKKILGELEKIKNSD-KEKYAKFYKLFGKVLKEGLWGFSTEKDEILKLCLFKSSKTGE 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SULNB (Chaperone protein htpG OS=Sulfurovum sp. (strain NBC37-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.330e-29
Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            E  NE   +W     E+++++Y EFYK   +   +PL Y H   EG  EF ++ YIP   P++           ++LYVKRVFI+DD D EL P YL FV+G++DS+DLPLNVSRE+LQE+RI+  +++  V+K    I+ +    + E  + F E + R +K G   D    + L  ++R Y S SEE ++S
Sbjct:  228 EQINEATALWTLPKSELKEEDYIEFYKTISHGDDEPLTYLHNKVEGANEFTTLFYIPKKAPMDLYRA--DYQPGVKLYVKRVFITDD-DKELLPPYLRFVRGIIDSEDLPLNVSRELLQENRILANIKQNSVKKILGAIKKL----DSEKMEIFTEQYNRVIKEGIYTDHTNKETLLGIVR-YKSSSEEGMVS 412          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP5 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisA53) GN=htpG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.420e-29
Identity = 66/190 (34.74%), Postives = 110/190 (57.89%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELI 730
            N    +W R+  E+  ++Y + YK   N F DP    H+  EG   +  +L+ P   P    ++  P+ K +++LYV+RVFI+DD D  L P YL F++GV+DS+DLPLN+SRE+LQ +  +  +RK +  K    ++ + + ++ E++ K W+ FG  +K G  ED  + ++L  L RF T+K +   +
Sbjct:  227 NSASALWQRSKSELAAEDYKQAYKSIANAFDDPAMTLHYRAEGRYSYAVMLFAPSTKPF---DLFEPQRKGHVKLYVRRVFITDDAD--LLPAYLRFIRGVIDSEDLPLNLSREMLQNNPQLVQIRKAVTGKVIGELESLGE-KDPENFAKIWDAFGPVIKEGIWEDYERREKLLALSRFTTTKGDNRTL 410          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_GLUOX (Chaperone protein htpG OS=Gluconobacter oxydans GN=htpG PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29
Identity = 68/191 (35.60%), Postives = 115/191 (60.21%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKED--YKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            + ANE   +W +   EI  ++Y EFY+   + F +P A  H+  EG  EF ++L++P   P +  E    +   I L+V+R+FI+D+   EL P ++ FV+GVVD++DLPLNVSRE+LQ + ++  +RK + ++   ++ +IS+   + D  +  FWENFG  +K G  ED+     +A   RF+++ S++
Sbjct:  226 QAANEGTALWSKPKSEITPEQYAEFYRHISHAFDEPYATLHWRAEGVTEFTALLFLPSARPFDFME--QSRESRIHLHVRRMFITDE--AELVPNWMRFVQGVVDTEDLPLNVSREMLQATPVLARIRKAVTKR---VLSEISKRAKEADSGFNSFWENFGAVIKEGLWEDAEHRTEIAGFARFHSTYSDD 409          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: ENPL_MESAU (Endoplasmin (Fragment) OS=Mesocricetus auratus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 2
Query:  365 KTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            K+  I+LYV+RVFI+DDF  ++ P+YL+FVKGVVDSDDLPLNVSRE LQ+ ++++++RK+LVRKT DMI+ I+  +  +    FW+ FG  +KLG +ED     RLA LLRF +S    ++ S
Sbjct:    2 KSDYIKLYVRRVFITDDFH-DMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYND---TFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHSTDITS 120          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_WOLPM (Chaperone protein htpG OS=Wolbachia pipientis wMel GN=htpG PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.266e-28
Identity = 69/196 (35.20%), Postives = 117/196 (59.69%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR--LAPLLRFYTSKSEEELIS 733
            E  N    IW +   ++ ++E+++F++   +   +P    H   EG +E+ ++LY+P + P    ++ +P  + +++LYV +VFI++D + ++ P+YL F+KG+VDS DLPLN+SRE LQ +R+V  +RK L ++    +      EN E+Y KFW NFG  LK G  E     +R  L  + RF+ S  +E+L+S
Sbjct:  226 EKLNSKAAIWTKPKNDVTQEEHNDFFRSVAHVGGEPWMILHNKNEGAIEYTNLLYVPSIKPF---DLFHPDRRCSVKLYVNKVFITED-NVQIIPQYLRFLKGIVDSPDLPLNISRETLQNNRVVEQIRKSLTKRAISELGK-KAKENLEEYTKFWTNFGAVLKEGLCEAMPTDEREALLSICRFH-STGDEKLVS 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NATTJ (Chaperone protein htpG OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.159e-28
Identity = 70/198 (35.35%), Postives = 116/198 (58.59%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGK-PQRLAPLLRFYTSKSEEELIS 733
            Y + E  N   PIW RN  E+  ++Y  FY++    F +P+ + H   EG + F++VL+IP   P N         K + LY   V I +    +L P Y SFV+GVVDS+DL LN+SRE+LQ+ + ++++ K +  K    ++++ +++ +E Y++F+E+FG  LK G   + G+  + L  LL FY+SK E +++S
Sbjct:  228 YIEEETVNTMVPIWERNKNELTDEDYKNFYRERHYGFDEPITHIHINAEGTISFKAVLFIPERPPFN--FYTKEFEKGLELYSNGVLIMNKCP-DLLPDYFSFVRGVVDSEDLSLNISREMLQQDKQLKLIAKNIKNKVKKELKNVMEND-REKYEEFFESFGTLLKYGIYSEFGQNKETLQDLLLFYSSK-ENKMVS 420          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_TREPA (Chaperone protein htpG OS=Treponema pallidum GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 67/182 (36.81%), Postives = 109/182 (59.89%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYT 706
            N+   +W R   E+++++YH FY+    +   PL Y H   EG  E+ ++ Y+P   P    ++ +   K  ++L+VKRVFI+DD + EL P YL FV+GV+DS+DLPLNVSREILQ++R++  ++   V+K     + +++ + K+ Y +F   + R LK G   D    ++L  L+RF T
Sbjct:  240 NDAGALWKRPKSELKEEDYHRFYQTLTRDSTPPLLYVHTKAEGTQEYVTLFYVPAKAPF---DLFHADYKPGVKLFVKRVFITDD-EKELLPVYLRFVRGVIDSEDLPLNVSREILQQNRVLAAIKSASVKKLLGEFKRLAECDGKK-YDEFITQYNRPLKEGLYSDYEHREQLLELVRFRT 416          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_SULDN6.711e-3035.98Chaperone protein htpG OS=Sulfurimonas denitrifica... [more]
HTPG_CHLTE2.550e-2938.62Chaperone protein htpG OS=Chlorobium tepidum GN=ht... [more]
HTPG_CAMHC2.550e-2937.63Chaperone protein htpG OS=Campylobacter hominis (s... [more]
HTPG_SULNB3.330e-2938.86Chaperone protein htpG OS=Sulfurovum sp. (strain N... [more]
HTPG_RHOP57.420e-2934.74Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_GLUOX9.690e-2935.60Chaperone protein htpG OS=Gluconobacter oxydans GN... [more]
ENPL_MESAU9.690e-2952.03Endoplasmin (Fragment) OS=Mesocricetus auratus GN=... [more]
HTPG_WOLPM1.266e-2835.20Chaperone protein htpG OS=Wolbachia pipientis wMel... [more]
HTPG_NATTJ2.159e-2835.35Chaperone protein htpG OS=Natranaerobius thermophi... [more]
HTPG_TREPA2.819e-2836.81Chaperone protein htpG OS=Treponema pallidum GN=ht... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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