FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 67/191 (35.08%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            N    +W R+  E+ +++Y++ YK+    F +P    H+  EG   +  +L+ P   P    ++  P+ K  I+LYV+RVFI+ D D  L P YL F++GV+DS+DLPLN+SRE+LQ +  +  +RK +  K    ++ ++  +  ED+ + WE FG  LK G  ED  + ++L  L RF T+  E+  +S
Sbjct:  227 NSASALWQRSKSELTEEDYNQAYKQIAGAFDEPAMTLHYRAEGRQSYAVLLFAPATKPF---DLFEPERKGRIKLYVRRVFITADAD--LLPPYLRFLRGVIDSEDLPLNLSREMLQNNPQLAQIRKAVTGKVIGELESLA-DKKPEDFARIWEAFGPVLKEGLYEDYERREKLLALARFTTTAGEKRTLS 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBJ (Chaperone protein htpG OS=Clostridium botulinum (strain Kyoto / Type A2) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEE 721
            Y + E  N   PIW +N  E++ ++Y  FY +    F  P+ Y H + +G V + ++L+IP   P   +       K + LY   V I +   G+L P Y  FVKG+VDS+DL LN+SREILQ  R ++++ K +  K  + ++ + + E ++ Y+KF+E+FGR LK G   D G  +  L  LL FY+SK ++
Sbjct:  226 YKEEETINSMVPIWRKNKNELKSEDYENFYAEKHYGFDKPIKYIHTSVDGVVSYNAILFIPETTPY--DFYTKEYEKGLELYSSGVLIMNKC-GDLLPDYFGFVKGIVDSEDLSLNISREILQHDRQLKLIAKNIKTKIKNELESLLKKE-RDKYEKFYESFGRQLKYGVYSDFGSNKDILQDLLMFYSSKEKK 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB6 (Chaperone protein htpG OS=Clostridium botulinum (strain 657 / Type Ba4) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEE 721
            Y + E  N   PIW +N  E++ ++Y  FY +    F  P+ Y H + +G V + ++L+IP   P   +       K + LY   V I +   G+L P Y  FVKG+VDS+DL LN+SREILQ  R ++++ K +  K  + ++ + + E ++ Y+KF+E+FGR LK G   D G  +  L  LL FY+SK ++
Sbjct:  226 YKEEETINSMVPIWRKNKNELKSEDYENFYAEKHYGFDKPIKYIHTSVDGVVSYNAILFIPETTPY--DFYTKEYEKGLELYSSGVLIMNKC-GDLLPDYFGFVKGIVDSEDLSLNISREILQHDRQLKLIAKNIKTKIKNELESLLKKE-RDKYEKFYESFGRQLKYGVYSDFGSNKDILQDLLMFYSSKEKK 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BRAJA (Chaperone protein htpG OS=Bradyrhizobium japonicum GN=htpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28
Identity = 66/187 (35.29%), Postives = 109/187 (58.29%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            N    +W R+  E+  ++Y + Y++  + F DP    H+  EG   +  +L+ P   P    ++  P  K  +RLYV+RVFI+DD D  L P YL F++GVVDS+DLPLN+SRE+LQ +  +  +RK +  +    ++ +++ ++ E++ K W+ FG  LK G  ED  + ++L  L RF T+  E+
Sbjct:  227 NSASALWQRSKSELSAEDYKKAYQQIASAFDDPAMTLHYRAEGRYSYAVLLFAPSTKPF---DLFEPSRKGRVRLYVRRVFITDDAD--LLPGYLRFIRGVVDSEDLPLNISREMLQNNPQLVQIRKAVATRVVSELEGLAE-KDAENFAKIWDAFGAVLKEGIYEDFERREKLLALSRFTTTTGEK 407          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBM (Chaperone protein htpG OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28
Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEE 721
            Y + E  N   PIW +N  E++ ++Y  FY +    F  P+ Y H + +G V + ++L+IP   P   +       K + LY   V I +   G+L P Y  FVKG+VDS+DL LN+SREILQ  R ++++ K +  K  + ++ + + E ++ Y+KF+E+FGR LK G   D G  +  L  LL FY+SK ++
Sbjct:  226 YKEEETINSMVPIWRKNKNELKAEDYENFYAEKHYGFDKPIKYIHTSVDGVVSYNAILFIPETTPY--DFYTKEYEKGLELYSSGVLIMNKC-GDLLPDYFGFVKGIVDSEDLSLNISREILQHDRQLKLIAKNIKTKIKNELESLLKKE-RDKYEKFYESFGRQLKYGVYSDFGSNKDILQDLLMFYSSKEKK 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBL (Chaperone protein htpG OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28
Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEE 721
            Y + E  N   PIW +N  E++ ++Y  FY +    F  P+ Y H + +G V + ++L+IP   P   +       K + LY   V I +   G+L P Y  FVKG+VDS+DL LN+SREILQ  R ++++ K +  K  + ++ + + E ++ Y+KF+E+FGR LK G   D G  +  L  LL FY+SK ++
Sbjct:  226 YKEEETINSMVPIWRKNKNELKAEDYENFYAEKHYGFDKPIKYIHTSVDGVVSYNAILFIPETTPY--DFYTKEYEKGLELYSSGVLIMNKC-GDLLPDYFGFVKGIVDSEDLSLNISREILQHDRQLKLIAKNIKTKIKNELESLLKKE-RDKYEKFYESFGRQLKYGVYSDFGSNKDILQDLLMFYSSKEKK 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBK (Chaperone protein htpG OS=Clostridium botulinum (strain Okra / Type B1) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28
Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEE 721
            Y + E  N   PIW +N  E++ ++Y  FY +    F  P+ Y H + +G V + ++L+IP   P   +       K + LY   V I +   G+L P Y  FVKG+VDS+DL LN+SREILQ  R ++++ K +  K  + ++ + + E ++ Y+KF+E+FGR LK G   D G  +  L  LL FY+SK ++
Sbjct:  226 YKEEETINSMVPIWRKNKNELKAEDYENFYAEKHYGFDKPIKYIHTSVDGVVSYNAILFIPETTPY--DFYTKEYEKGLELYSSGVLIMNKC-GDLLPDYFGFVKGIVDSEDLSLNISREILQHDRQLKLIAKNIKTKIKNELESLLKKE-RDKYEKFYESFGRQLKYGVYSDFGSNKDILQDLLMFYSSKEKK 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBH (Chaperone protein htpG OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28
Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEE 721
            Y + E  N   PIW +N  E++ ++Y  FY +    F  P+ Y H + +G V + ++L+IP   P   +       K + LY   V I +   G+L P Y  FVKG+VDS+DL LN+SREILQ  R ++++ K +  K  + ++ + + E ++ Y+KF+E+FGR LK G   D G  +  L  LL FY+SK ++
Sbjct:  226 YKEEETINSMVPIWRKNKNELKAEDYENFYAEKHYGFDKPIKYIHTSVDGVVSYNAILFIPETTPY--DFYTKEYEKGLELYSSGVLIMNKC-GDLLPDYFGFVKGIVDSEDLSLNISREILQHDRQLKLIAKNIKTKIKNELESLLKKE-RDKYEKFYESFGRQLKYGVYSDFGSNKDILQDLLMFYSSKEKK 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB1 (Chaperone protein htpG OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28
Identity = 70/194 (36.08%), Postives = 110/194 (56.70%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEE 721
            Y + E  N   PIW +N  E++ ++Y  FY +    F  P+ Y H + +G V + ++L+IP   P   +       K + LY   V I +   G+L P Y  FVKG+VDS+DL LN+SREILQ  R ++++ K +  K  + ++ + + E ++ Y+KF+E+FGR LK G   D G  +  L  LL FY+SK ++
Sbjct:  226 YKEEETINSMVPIWRKNKNELKAEDYENFYAEKHYGFDKPIKYIHTSVDGVVSYNAILFIPETTPY--DFYTKEYEKGLELYSSGVLIMNKC-GDLLPDYFGFVKGIVDSEDLSLNISREILQHDRQLKLIAKNIKTKIKNELESLLKKE-RDKYEKFYESFGRQLKYGVYSDFGSNKDILQDLLMFYSSKEKK 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NITWN (Chaperone protein htpG OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=htpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.809e-28
Identity = 67/178 (37.64%), Postives = 105/178 (58.99%), Query Frame = 2
Query:  179 IWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNP-KTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            +W R   EI   EY +FY+    +F +P    HF  EG  EF ++L++P   P    ++  P K + ++LYV+RVFI++D D  L PRYL FV+GVVDS DLPLN+SRE++QES I+  ++K +  +    ++ ++  ++ + Y K WE FG   K G  + + +   +  L RF T+
Sbjct:  236 LWTRPRGEISASEYADFYRSVAGQFDEPALTVHFRAEGRQEFTALLFVPQTRPF---DLFEPDKKRQLKLYVRRVFITEDAD--LLPRYLRFVRGVVDSADLPLNISREMIQESPILAAIKKSITGRILSELEKLA-DKDAQAYGKIWEAFGPMFKEGIYDAADRRDTVLGLSRFRTT 407          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_RHOPS2.819e-2835.08Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_CLOBJ2.819e-2836.08Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOB62.819e-2836.08Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_BRAJA2.819e-2835.29Chaperone protein htpG OS=Bradyrhizobium japonicum... [more]
HTPG_CLOBM3.682e-2836.08Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOBL3.682e-2836.08Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOBK3.682e-2836.08Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOBH3.682e-2836.08Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOB13.682e-2836.08Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_NITWN4.809e-2837.64Chaperone protein htpG OS=Nitrobacter winogradskyi... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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