FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_DESDG (Chaperone protein htpG OS=Desulfovibrio desulfuricans (strain G20) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 66/191 (34.55%), Postives = 107/191 (56.02%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N T  +W     ++ +++Y +FY     +   P+   H + +  V+F S+ +IP  G   NE     + K  + LYV+RV IS ++   L P YLSF+KGVVD++DLPLN+SRE LQE+ ++  +R+ LV++    +  +++S+  E Y  FW   GR  ++G   D     +  PLLRF +S  ++E
Sbjct:  218 EHVNTTPALWREPRFQVTEEQYKDFYTFLTFDTQAPMDTIHLSIDAPVQFTSLAFIPNFG---NELFGYDRDKYGLDLYVRRVLISKEYKA-LIPEYLSFLKGVVDTEDLPLNISRETLQENALIAKIRQTLVKQVLAHLAKLAESD-AEKYATFWRTHGRVFRMG-YNDYINRDKFIPLLRFNSSALDDE 402          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOTE (Chaperone protein htpG OS=Clostridium tetani GN=htpG PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24
Identity = 66/197 (33.50%), Postives = 106/197 (53.81%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y++ E  N   PIW +N  E++ ++Y  FY      +  PL       EG V + ++L+IP   P   +       K + LY   V I +    +L P Y SFV+G+VDS+DL LN+SRE+LQ  R ++++ K +  K    +  I +++ +EDY KF+ NFGR LK G   D G  + +   L  + S +E++L++
Sbjct:  226 YFEDETLNSMVPIWKKNKNEVKTEDYERFYIDKHFGYDKPLKSIRSKVEGVVSYTALLFIPSTTPY--DFYTRNFEKGLELYSNGVLIMEKC-ADLLPDYFSFVQGLVDSEDLSLNISRELLQHDRQLKLIAKNIKEKIKSELLSILKNK-REDYIKFYNNFGRQLKYGVYSDFGANKEVLQDLIMFYSSTEKKLVT 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24
Identity = 65/191 (34.03%), Postives = 109/191 (57.07%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSG-KPQRLAPLLRFYTSKSEEELIS 733
            N   PIW +N  E++ ++Y  FY +    F  PL + H + +G V + ++L+IP   P   +       K + LY   V I +    +L P Y SFVKG+VDS+DL LN+SRE+LQ  R ++++ K +  K    ++ + + E +E +++F+ +FGR LK G   D G   + L  LL FY+S +E+++++
Sbjct:  233 NSMVPIWRKNKNELKDEDYTNFYHEKRYGFDQPLKHIHISVDGAVRYNAILFIPENIPF--DYYTKEFEKGLELYSNGVLIMEKCP-DLLPDYYSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNIKNKITSHLKTLLKDE-REKFEQFYRSFGRQLKYGVYSDFGANKEDLQDLLLFYSS-TEKKMVT 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ORITB (Chaperone protein htpG OS=Orientia tsutsugamushi (strain Boryong) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24
Identity = 57/187 (30.48%), Postives = 109/187 (58.29%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            N +  +W R+  +I  ++Y EFY+        P    H  +EG +EF ++L+IP        ++ +P  K+ ++LY+K+VFI+D+ +  L P+Y+ F++GVVDS+DL LN+SRE LQ S ++  ++  + ++    ++   +++++ +Y+ FW NFG  LK G  E +    +L  +  F ++  ++
Sbjct:  219 NSSSALWTRSKSDITDEQYEEFYRNIAYAIDKPWVTIHNKSEGVIEFTNLLFIPSSKTF---DLFHPDRKSRVKLYIKKVFITDE-NVALIPKYMRFLRGVVDSEDLSLNISRETLQHSPLIDKIQASITKRVITELEK-QKTKDQGEYETFWNNFGAVLKEGLCEGTADVDKLLKICLFRSALQDK 400          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: TRAP1_HUMAN (Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens GN=TRAP1 PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24
Identity = 61/191 (31.94%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCV--EDSGKPQRLAPLLRFYTS 709
            Y +    N  + IWM +PK++ + ++ EFY+        P    H+ T+  +  RS+ Y+P M P +  ++      ++ LY ++V I      ++ P++L F++GVVDS+D+PLN+SRE+LQES ++R +R  L ++      D S+ ++ E Y KF+E++G F++ G V   +    + +A LLR+ +S
Sbjct:  286 YLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYVPDMKP-SMFDVSRELGSSVALYSRKVLIQTKAT-DILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSK-KDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESS 473          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23
Identity = 58/112 (51.79%), Postives = 81/112 (72.32%), Query Frame = 2
Query:  197 KEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVR 529
            +E +  EY EFYK   +++ D LA  HF+ EG++EFR++L+ P   P +  E  N K KN I+LYV+RVFI D  D EL P YL+F+ GVVDS+DLPLN+SRE+LQ+S+I++
Sbjct:  236 EEDDSKEYGEFYKSLTSDWEDHLAVKHFSVEGQLEFRALLFSPRRAPFDLFE--NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIHGVVDSEDLPLNISREMLQQSKILK 344          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_EXIS2 (Chaperone protein htpG OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.601e-23
Identity = 60/190 (31.58%), Postives = 105/190 (55.26%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            N   PIW +N +E+  ++Y  FY++    F  P+ + H + +G V ++S+L+IP       +       K + LY   V I +    +L P + SFVKG+VDS+DL LN+SRE+LQ  R ++++ K +  K    ++ + + +++E Y+ F++ FGR LK G   D G  +     L  + S  E++L++
Sbjct:  232 NSMVPIWRKNKRELTDEDYRNFYQEKRYGFDAPIKHIHISADGAVRYQSILFIPEQPSF--DYYSKEFEKGLELYANGVLIMEKCS-DLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNIQSKIKTQLEALLR-DDREKYETFYQAFGRQLKFGIYNDYGMQKDTVKDLVLFHSAKEKKLVT 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.091e-23
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVD 469
            Y + E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D+ + +L P YL+F+KGVVD
Sbjct:  268 YTEDEELNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPFDLFE-NQKKRNNIKLYVRRVFIMDNCE-DLIPEYLNFIKGVVD 374          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_DESVH (Chaperone protein htpG OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 64/193 (33.16%), Postives = 106/193 (54.92%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEI--MNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            D E  N T  +W      I  ++Y +FYK    +   PL   H + +  V+F  ++++P  G    +E+  M      + LYV+RV I  + + +L P YL F+KG+VD++DLPLN+SRE LQE+ +VR + + L ++    +  ++ +++ E Y  FW   G+  KLG   D    ++ APLLRF +S  ++
Sbjct:  217 DGEQVNTTPALWREPKFSITDEQYADFYKHLTFDTEAPLRTLHVSVDAPVQFTGLVFVPPHG----QEVFSMGRDRWGLDLYVRRVLIQRE-NKDLLPEYLGFLKGIVDTEDLPLNISRETLQENVVVRKIGQTLTKQVLADLARLA-ADDAEAYATFWRQHGKVFKLG-YSDYANREKFAPLLRFNSSHHDD 402          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVD 469
            Y + E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D+ + +L P YL+F+KGVVD
Sbjct:  269 YTEDEELNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPFDLFE-NQKKRNNIKLYVRRVFIMDNCE-DLIPEYLNFMKGVVD 375          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_DESDG1.891e-2434.55Chaperone protein htpG OS=Desulfovibrio desulfuric... [more]
HTPG_CLOTE2.470e-2433.50Chaperone protein htpG OS=Clostridium tetani GN=ht... [more]
HTPG_BACHD3.226e-2434.03Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
HTPG_ORITB4.213e-2430.48Chaperone protein htpG OS=Orientia tsutsugamushi (... [more]
TRAP1_HUMAN9.386e-2431.94Heat shock protein 75 kDa, mitochondrial OS=Homo s... [more]
H90B3_HUMAN1.226e-2351.79Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HTPG_EXIS21.601e-2331.58Chaperone protein htpG OS=Exiguobacterium sibiricu... [more]
HSP83_DROVI2.091e-2350.46Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
HTPG_DESVH3.567e-2333.16Chaperone protein htpG OS=Desulfovibrio vulgaris (... [more]
HSP83_DROSI3.567e-2350.46Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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