FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.718e-39
Identity = 81/190 (42.63%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N    +W R+  E++ +EY EFYK   ++F +PLA+SH   EG++E+ S+LY+P   P +  +   P  + ++LYV+RVFI D  +  L P YL F+KGVVDS+DL LNVSREILQ+  I+  M+  L ++  DM++ ++++E  E YK FW+NFG+ LK G  ED    +++A LLRF +++ +
Sbjct:  229 EWETVNRASALWTRSRTEVKDEEYQEFYKHIGHDFENPLAWSHNKVEGKLEYNSLLYVPARAPFDLYQREAP--RGLKLYVQRVFIMDQAESFL-PLYLRFIKGVVDSNDLSLNVSREILQKDPIIDSMKTALTKRVLDMLEKLAKNE-PEKYKGFWKNFGQVLKEGPAEDFANKEKIAGLLRFASTQDD 414          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSEF5 (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=htpG PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.550e-39
Identity = 80/191 (41.88%), Postives = 125/191 (65.45%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            +WE  N    +W R   EI+ +EY EFYK   ++F +PL++SH   EG++E+ S+LY+P   P +  +   P  K ++LYV+RVF+ D  +  L P YL F+KGVVDS+DL LNVSREILQ+  I+  M+  L ++  DM++ ++++E  E YK FW+NFG+ +K G  ED    +++A LLRF +++ ++
Sbjct:  229 EWETVNRASALWTRPRTEIKDEEYQEFYKHIAHDFENPLSWSHNKVEGKLEYSSLLYVPARAPFDLYQREAP--KGLKLYVQRVFVMDQAESFL-PLYLRFIKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNE-PEQYKGFWKNFGQVMKEGPAEDFANKEKIAGLLRFASTQGDD 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_HALHL (Chaperone protein htpG OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.550e-39
Identity = 81/191 (42.41%), Postives = 120/191 (62.83%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            WE+ N    +WMR   EI +++Y E YK   ++F DPL + H   EG   + S+LYIP   P +  E        ++LYV+RVFI++D +  L PRYL FV+GV+DSDDLPLN+SRE+LQ + ++  +R   V++  D ++ ++++E  EDY  FW+ FGR  K G  ED G  +R+A LLRF ++  E+E
Sbjct:  233 WEIVNRASALWMRPKSEISEEDYQELYKHVAHDFDDPLTWIHNHVEGRQSYVSLLYIPKRPPFDLYE--QKPAHGVKLYVRRVFITEDTE-HLLPRYLRFVRGVIDSDDLPLNISREMLQHNPMISSLRSASVKRILDRLECMAKNE-PEDYATFWQAFGRVFKEGIAEDPGNRERIARLLRFSSTHEEKE 419          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBSL (Chaperone protein htpG OS=Vibrio splendidus (strain LGP32) GN=htpG PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 81/196 (41.33%), Postives = 131/196 (66.84%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSK--SEEELI 730
            WE  N+ + +W RN  +IEK+EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++MN   K+ ++LYV+RVFI DD + +  P Y+ FV+G++DS+DLPLNVSREILQ++++ + +R    ++   M++ +++++N + Y +FW+ FG  LK G  ED    +++A LLRF +++  S E+ I
Sbjct:  232 WEQINKAQALWTRNKSDIEKEEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPW---DMMNRDHKSGLKLYVQRVFIMDDAE-QFMPSYMRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERMAKNDN-DKYLEFWKEFGLVLKEGPAEDMANKEKIAGLLRFSSTEVDSSEQTI 422          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_VIBF1 (Chaperone protein htpG OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=htpG PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 79/190 (41.58%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R+  +IE  EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++MN   K+ ++LYV+RVFI DD + +  P YL FVKG++DS+DLPLNVSREILQ++++ + +R    ++   M++ +++ ++ E Y  FW+ FG+ LK G  ED    +++A LLRF T++ +
Sbjct:  230 WEQVNKAQALWTRSKSDIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPF---DMMNRDHKSGLKLYVQRVFIMDDAE-QFMPTYLRFVKGLIDSNDLPLNVSREILQDNKVTQSLRSACTKRVLGMLEKMAKKDD-EKYLTFWKQFGQVLKEGLAEDLANKEKIAGLLRFATTEKD 414          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSEFS (Chaperone protein htpG OS=Pseudomonas fluorescens (strain SBW25) GN=htpG PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 79/191 (41.36%), Postives = 126/191 (65.97%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            +WE+ N    +W R   EI+ +EY EFYK   +++ +PL++SH   EG++E+ S+LY+P   P +  +   P  K ++LYV+RVF+ D  +  L P YL F+KGVVDS+DL LNVSREILQ+  I+  M+  L ++  DM++ ++++E  E YK FW+NFG+ +K G  ED    +++A LLRF +++ ++
Sbjct:  231 EWEVVNRASALWTRPRTEIKDEEYQEFYKHIGHDYENPLSWSHNKVEGKLEYSSLLYVPARAPFDLYQREAP--KGLKLYVQRVFVMDQAESFL-PLYLRFIKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNE-PEQYKGFWKNFGQVMKEGPAEDFANKEKIAGLLRFASTQGDD 417          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CHRVO (Chaperone protein htpG OS=Chromobacterium violaceum GN=htpG PE=3 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 80/191 (41.88%), Postives = 123/191 (64.40%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            + E  N    +W R+  +I +++Y EFYK   ++F  PLA+SH   EG  E+  +LYIP   P +  +    + + ++LYV+RVFI +D + +L P YL FV+GV+DS+DLPLNVSREILQES+ +  +R   V+K   +++D+S ++  E Y +FW+ FG+ LK G  ED    +R+A LLRF ++ SE+
Sbjct:  226 EMEAVNSASALWTRSKNDISEEQYQEFYKHVAHDFTAPLAWSHARVEGRQEYTELLYIPSRAPFDLYD--RERKQGVKLYVRRVFIMEDTE-KLMPHYLRFVRGVIDSNDLPLNVSREILQESKDIDAIRAGCVKKVLGLLEDLSANQ-PEKYAEFWKEFGQVLKEGVGEDFANKERIAKLLRFVSTASED 412          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ALISL (Chaperone protein htpG OS=Aliivibrio salmonicida (strain LFI1238) GN=htpG PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 83/197 (42.13%), Postives = 126/197 (63.96%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSK--SEEELIS 733
            WE  N+ + +W RN  EIE  EY EFYK   ++F DPL +SH   EG+ ++ S+LYIP   P    ++MN   K+ ++LYV+RVF+ DD + +  P YL FVKG++DS+DL LNVSREILQ++++ + +R    ++   M++ I++ +N + Y  FW+ FG+ LK G  ED     ++A LLRF ++   S E+ IS
Sbjct:  231 WEQVNKAQALWTRNKSEIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPF---DMMNRDHKSGLKLYVQRVFVMDDAE-QFMPSYLRFVKGLIDSNDLALNVSREILQDNKVTQSLRGACTKRVLSMLEKIAKKDN-DKYLSFWKEFGQVLKEGLAEDFANKDKIAGLLRFASTNKDSSEQAIS 422          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BORPE (Chaperone protein htpG OS=Bordetella pertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.909e-39
Identity = 81/190 (42.63%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W RN  +I  ++Y EFYK   +++ DPLA++H   EG  E+  +LY+P   P +  +      + ++LYVKRVFI DD + +L P YL FV+GV+DS DLPLNVSREILQESR VR +R+   ++   +++D+++++  EDY  FW  FG+ LK G  ED+   +R+A LLRF ++   E+
Sbjct:  235 ETVNQANALWTRNKSDITDEQYREFYKTVSHDYDDPLAWTHNRVEGRSEYTQLLYVPKHAPFDLWD--RDARRGVKLYVKRVFIMDDAE-QLLPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENK-AEDYATFWTEFGQVLKEGTGEDAANRERIARLLRFASTHDGEQ 420          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.909e-39
Identity = 81/190 (42.63%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W RN  +I  ++Y EFYK   +++ DPLA++H   EG  E+  +LY+P   P +  +      + ++LYVKRVFI DD + +L P YL FV+GV+DS DLPLNVSREILQESR VR +R+   ++   +++D+++++  EDY  FW  FG+ LK G  ED+   +R+A LLRF ++   E+
Sbjct:  235 ETVNQANALWTRNKSDITDEQYREFYKTVSHDYDDPLAWTHNRVEGRSEYTQLLYVPKHAPFDLWD--RDARRGVKLYVKRVFIMDDAE-QLLPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENK-AEDYATFWTEFGQVLKEGTGEDAANRERIARLLRFASTHDGEQ 420          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_PSEPK2.718e-3942.63Chaperone protein htpG OS=Pseudomonas putida (stra... [more]
HTPG_PSEF53.550e-3941.88Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_HALHL3.550e-3942.41Chaperone protein htpG OS=Halorhodospira halophila... [more]
HTPG_VIBSL6.056e-3941.33Chaperone protein htpG OS=Vibrio splendidus (strai... [more]
HTPG_VIBF16.056e-3941.58Chaperone protein htpG OS=Vibrio fischeri (strain ... [more]
HTPG_PSEFS6.056e-3941.36Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_CHRVO6.056e-3941.88Chaperone protein htpG OS=Chromobacterium violaceu... [more]
HTPG_ALISL6.056e-3942.13Chaperone protein htpG OS=Aliivibrio salmonicida (... [more]
HTPG_BORPE7.909e-3942.63Chaperone protein htpG OS=Bordetella pertussis GN=... [more]
HTPG_BORBR7.909e-3942.63Chaperone protein htpG OS=Bordetella bronchiseptic... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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