FC868764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: LSRE_SALTY (Putative epimerase lsrE OS=Salmonella typhimurium GN=lsrE PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14 Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYG 168
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: LSRE_SALTI (Putative epimerase lsrE OS=Salmonella typhi GN=lsrE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14 Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWAAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYG 168
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: LSRE_SALPB (Putative epimerase lsrE OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lsrE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14 Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYG 168
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: LSRE_SALCH (Putative epimerase lsrE OS=Salmonella choleraesuis GN=lsrE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14 Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYG 168
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_ENCCU (Ribulose-phosphate 3-epimerase OS=Encephalitozoon cuniculi GN=RPE1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 49/142 (34.51%), Postives = 71/142 (50.00%), Query Frame = 2 Query: 284 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH---CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 SIL NF L E++ ++ G IH+DVMD FV NIT GP +++ + D DVH+M+ P + +V++H C+++ R N + G+ LNP T + E + D VLIMSV PGFG Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHMMVESPLDIIMQIDLERVSLVTIHSEVCDKAGVAEYLRKRNVL------FGIALNPETQVDDAE--MRSADFVLIMSVKPGFG 145
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: SGCE_ECOLI (Protein sgcE OS=Escherichia coli (strain K12) GN=sgcE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13 Identity = 44/141 (31.21%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 269 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNP 691 +I+ PS+ SAN G ++ A++ +H+D+ D F+ NIT G V A+ T PL H M+ P++ + + VH E + + TL +I+ GA+AG+V NPAT + A + +D V++M+ P Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFHFMLARPQRWFNALAEIRPAWIFVHAE--TLDYPSETLTEIRHTGARAGLVFNPATPIDAWRYLASELDGVMVMTSEP 139 The following BLAST results are available for this feature:
BLAST of FC868764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868764 ID=FC868764; Name=FC868764; organism=Citrus clementina; type=EST; length=702bpback to top |