FC868765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_RABIT (Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus GN=EIF2C2 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID--RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N + Q GG N L+ R P F + V+F+GADV HP A + PSIAAVV +++ NRY A VR Q HR E I + A M E++ + + + +P II +RDGVSEGQF VL+ EL+ ++ A + DY P IT IV QKRH TRLF Sbjct: 496 LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQT--LSNLCLKINVKLGGVNNILLPQGRPPVF--QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLF 697
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_MOUSE (Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID--RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N + Q GG N L+ R P F + V+F+GADV HP A + PSIAAVV +++ NRY A VR Q HR E I + A M E++ + + + +P II +RDGVSEGQF VL+ EL+ ++ A + DY P IT IV QKRH TRLF Sbjct: 516 LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQT--LSNLCLKINVKLGGVNNILLPQGRPPVF--QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLF 717
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_HUMAN (Protein argonaute-2 OS=Homo sapiens GN=EIF2C2 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID--RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N + Q GG N L+ R P F + V+F+GADV HP A + PSIAAVV +++ NRY A VR Q HR E I + A M E++ + + + +P II +RDGVSEGQF VL+ EL+ ++ A + DY P IT IV QKRH TRLF Sbjct: 515 LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQT--LSNLCLKINVKLGGVNNILLPQGRPPVF--QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLF 716
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_BOVIN (Protein argonaute-2 OS=Bos taurus GN=EIF2C2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID--RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N + Q GG N L+ R P F + V+F+GADV HP A + PSIAAVV +++ NRY A VR Q HR E I + A M E++ + + + +P II +RDGVSEGQF VL+ EL+ ++ A + DY P IT IV QKRH TRLF Sbjct: 516 LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQT--LSNLWLKINVKLGGVNNILLPQGRPPVF--QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLF 717
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_XENTR (Protein argonaute-2 OS=Xenopus tropicalis GN=eif2c2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28 Identity = 80/207 (38.65%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID--RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N + Q GG N L+ R P F + V+F+GADV HP A + PSIAAVV +++ NRY A VR Q HR E I + + M E++ + + + +P II +RDGVSEGQF VL+ EL+ ++ A + DY P IT IV QKRH TRLF Sbjct: 527 LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQT--LSNLCLKINVKLGGVNNILLPQGRPPVF--QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLSAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLF 728
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_XENLA (Protein argonaute-2 OS=Xenopus laevis GN=eif2c2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28 Identity = 80/207 (38.65%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID--RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N + Q GG N L+ R P F + V+F+GADV HP A + PSIAAVV +++ NRY A VR Q HR E I + + M E++ + + + +P II +RDGVSEGQF VL+ EL+ ++ A + DY P IT IV QKRH TRLF Sbjct: 518 LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQT--LSNLCLKINVKLGGVNNILLPQGRPPVF--QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLSAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLF 719
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO1_ARATH (Protein argonaute OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28 Identity = 95/260 (36.54%), Postives = 130/260 (50.00%), Query Frame = 3 Query: 9 PVLSEPASMRLFSNVGGLQELLEDVTSRAYKIGKGHLQILICVMSRKDDGYKY--LKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 PVL P S R L+ D TS K+ +G L+ V+ ++G Y LK I ET++G+V+QCCL+ + K QY GG N L+D R+P ++F GADV HP +SPSIAAVVA+ +WP +Y V Q HR E I + GM E++ ++ + +P II +RDGVSEGQF VL EL ++ A S++ Y P +T +V QKRH TRLF Sbjct: 641 PVLP-PVSARPEQVEKVLKTRYHDATS---KLSQGKEIDLLIVILPDNNGSLYGDLKRICETELGIVSQCCLTKHVFKMS--KQYMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIF-GADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF 893
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_RAT (Protein argonaute-2 OS=Rattus norvegicus GN=Eif2c2 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.772e-28 Identity = 80/207 (38.65%), Postives = 113/207 (54.59%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID--RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N + Q GG N L+ R P F + V+F+GADV HP A + PSIAAVV +++ NRY A VR Q HR E I + A M E++ + + + +P II +RDGVSEGQF VL+ EL+ ++ A + +Y P IT IV QKRH TRLF Sbjct: 516 LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQT--LSNLCLKINVKLGGVNNILLPQGRPPVF--QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKEYQPGITFIVVQKRHHTRLF 717
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27 Identity = 86/243 (35.39%), Postives = 126/243 (51.85%), Query Frame = 3 Query: 60 LQELLEDVTSRAYKIGKG-HLQILICVMSRKDDG-YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 +++ L+ V + KG L++L+ ++ + Y LK I ET++G+++QCCL+ + K QY GG N L+D R+P ++F GADV HP ++SPSIAAVVA+ +WP +Y V Q HR E I + GM +++ S+ + +P II +RDGVSEGQF VL EL ++ A S++ Y P +T IV QKRH TRLF Sbjct: 603 VEKALKHVYHTSMNKTKGKELELLLAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKIS--KQYLANVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIF-GADVTHPENGEESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF 842
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.813e-27 Identity = 88/257 (34.24%), Postives = 129/257 (50.19%), Query Frame = 3 Query: 18 SEPASMRLFSNVGGLQELLEDVTSRAYKIGKG-HLQILICVMSRKDDG-YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 SEP + +++ L+ V + + KG L++L+ ++ + Y +K I ET +G+++QCCL+ + K QY GG N L+D R+P ++F GADV HP +SPSIAAVVA+ +WP +Y V Q HR E I + GM E++ S+ + +P II +RDGVSEGQF VL EL ++ A S++ Y P +T +V QKRH TRLF Sbjct: 584 SEPVIPIYSARPDQVEKALKHVYNMSLNKLKGKELELLLAILPDNNGSLYGDIKRICETDLGLISQCCLTKHVFKIS--KQYLANVSLKINVKMGGRNTVLLDAISWRIPLVSDIPTIIF-GADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 837 The following BLAST results are available for this feature:
BLAST of FC868765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868765 ID=FC868765; Name=FC868765; organism=Citrus clementina; type=EST; length=732bpback to top |