FC868765

Overview
NameFC868765
Unique NameFC868765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO2_DROME (Protein argonaute-2 OS=Drosophila melanogaster GN=AGO2 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19
Identity = 62/192 (32.29%), Postives = 93/192 (48.44%), Query Frame = 3
Query:  159 YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID--RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMDYHPRITLIVAQKRHQTRLFP 728
            Y  +K  +E + G++TQC       + K  +Q              G N ++ D  RLP  K   + M++GADV HP    +  PS+  V A+ + P    Y  + R Q    E+I +   + LE ++ Y +     P  II +RDGVS+GQF  + NEEL  +K A   +   P+I  ++  KRH TR FP
Sbjct:  897 YDTIKQKAELQHGILTQCIKQFTVER-KCNNQTIGNILLKINSKLNGINHKIKDDPRLPMMK---NTMYIGADVTHPSPDQREIPSVVGVAASHD-PYGASYNMQYRLQRGALEEIEDMFSITLEHLRVYKEYRNAYPDHIIYYRDGVSDGQFPKIKNEELRCIKQACDKVGCKPKICCVIVVKRHHTRFFP 1083          
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: TAG76_CAEEL (Putative protein tag-76 OS=Caenorhabditis elegans GN=tag-76 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 66/207 (31.88%), Postives = 104/207 (50.24%), Query Frame = 3
Query:  123 ILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELI-DRLPY-FKGEDHVMFVGADVNHPGASNK--TSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725
            I++ + S+  D Y  +K  S+   G+++QC L  N ++                   GG N+ ++ D++   +  +   M VG DV HP  +      PS+AA+VA V+      Y A V+ Q    E ++       E + ++ +  K +P  IIV+RDGVSEGQF  VL EE+  ++ A  ++  D+ P IT IV QKRH  R+F
Sbjct:  661 IIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVSRPTPAT--CANIVLKLNMKMGGINSRIVADKITNKYLVDQPTMVVGIDVTHPTQAEMRMNMPSVAAIVANVDL-LPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQKPARIIVYRDGVSEGQFSEVLREEIQSIRTACLAIAEDFRPPITYIVVQKRHHARIF 864          
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 69/227 (30.40%), Postives = 104/227 (45.81%), Query Frame = 3
Query:  126 LICVMSRKDDGYKYLKW--ISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAEL-IDR---LPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFR--------------DGVSEGQFDMVLNEELVPLKMAFRSM-------DYHPRITLIVAQKRHQTRLF 725
            ++CV+  + +   Y  W  +   K G+VTQC   T  N     DQY            GG N+ L I+R   +P    +   + +G DV+H        PS+AAVV+++ WP  ++Y A V  Q  R           LE++ S  +L  V  ++ ++ R              DGVSEGQF+ VLN EL  +  A   +       ++ P+ T+IVAQK H T+ F
Sbjct:  547 VLCVLPERKNCDIYGPWKRMCLVKYGIVTQCLAPTKIN-----DQYLTNVLLKINAKLGGLNSLLQIERNQAIPLLS-KTPTIILGMDVSHGSPGRDDVPSVAAVVSSLEWPLISKYKASVCTQSPR-----------LEMIDSLFKL--VGNEDHVIIRESLMDFYNSSRGHKDGVSEGQFNQVLNIELAQIIKACEFLANEKNDSEWSPKFTVIVAQKNHHTKFF 754          
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: PIWL2_MOUSE (Piwi-like protein 2 OS=Mus musculus GN=Piwil2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11
Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  351 VMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLE-VVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD-YHPRITLIVAQKRHQTRLF 725
            +M +G DV H    ++   S+   VA++N      Y   V    H  ++I++   +CL   +K Y ++N   P++I+V+RDGVS+GQ   V N E+  L+  F + D YHP++ + V QK+  T L+
Sbjct:  737 LMVIGMDVYHD--PSRGMRSVVGFVASINLTLTKWYSRVVFQMPH--QEIVDSLKLCLVGSLKKYYEVNHCLPEKIVVYRDGVSDGQLKTVANYEIPQLQKCFEAFDNYHPKMVVFVVQKKISTNLY 859          
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: PIWL2_DANRE (Piwi-like protein 2 OS=Danio rerio GN=piwil2 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 54/205 (26.34%), Postives = 99/205 (48.29%), Query Frame = 3
Query:  117 LQILICVMS-RKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM-DYHPRITLIVAQKRHQTRLF 725
            +Q+++C+M+  +DD Y  +K +   +  V +Q       ++ +                 GG    +   L Y      +M +G DV+H   ++K S S+   VA++N     ++ +RV  Q    E I  F    L  ++ Y ++N   P++I+++RDGVS+GQ   V + E+  +   F ++ +Y P++  IV QKR  T L+
Sbjct:  739 VQLVVCIMTGNRDDLYSAIKKLCCIQSPVPSQAINVRTISQPQKLRSVAQKILLQINCKLGGELWTVNVPLKY------LMVIGVDVHHD--TSKKSRSVMGFVASLN-SMLTKWYSRVTFQMPNEEIINGFRVCLLAALQKYYEVNHAFPEKIVIYRDGVSDGQLKTVEHYEIPQILKCFETIPNYEPKLAFIVVQKRISTTLY 934          
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: PIWL1_CHICK (Piwi-like protein 1 OS=Gallus gallus GN=PIWIL1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 59/205 (28.78%), Postives = 100/205 (48.78%), Query Frame = 3
Query:  123 ILICVMSR-KDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEV-VKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725
            I++C++S  + D Y  +K    T   + +QC ++   +K +                 GG    +   +P       +M VG D  H   S K S  IA  VA++N     R+ +R   Q  R ++I++    CL+  ++ + + NK  P  IIV+RDGV +GQ + ++N E+       +++  DY+PR+T+IV +KR  TR F
Sbjct:  561 IVVCILSSTRKDKYDAIKKYLCTDCPIPSQCVVARTLSKPQTALAIVTKIALQMNCKMGGELWSV--EIPL----KQLMIVGIDCYHDTLSGKQS--IAGFVASLN-EKMTRWFSRCVVQS-RGQEIVDGLKACLQTALREWFKWNKYLPSRIIVYRDGVGDGQLNTLVNYEVPQFLDCLKTVGKDYNPRLTVIVVKKRVSTRFF 755          
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: PIWL2_ONCMY (Piwi-like protein 2 OS=Oncorhynchus mykiss GN=piwil2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  348 HVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM-DYHPRITLIVAQKRHQTRLF 725
            H+M +G DV+H   ++K + S+   VA++N     R+ +RV  Q    E I  F    L  ++ Y  +N   P++I+V+RDGVS+GQ   V   E+  L   F +  +Y P++  IV QKR  T L+
Sbjct:  819 HLMVIGVDVHHD--TSKKNRSVMGFVASLN-SLLTRWYSRVTFQMPNEEIINGFRVCLLAALQKYYGVNHNFPEKIVVYRDGVSDGQLKTVELYEIPQLLKCFETFPNYEPKLAFIVVQKRVSTNLY 942          
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: PIWL1_DANRE (Piwi-like protein 1 OS=Danio rerio GN=piwil1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  351 VMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLFPR 731
            +M VG D  H  A+ K S  I A+VA++N    +R+ ++   Q+   E I    G     +K+Y++ N   P  IIV+RDGV +G    V++ E+  +  + ++M  DY P+++++V +KR  +R F R
Sbjct:  623 LMIVGIDCYHDTAAGKRS--IGAMVASLN-QGMSRWFSKCVLQNRGQEIIDALKGSLQGALKAYLKYNNSLPSRIIVYRDGVGDGMLQSVVDYEVPQIMQSIKTMGQDYEPKLSVVVVKKRISSRFFAR 748          
The following BLAST results are available for this feature:
BLAST of FC868765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
AGO2_DROME4.049e-1932.29Protein argonaute-2 OS=Drosophila melanogaster GN=... [more]
TAG76_CAEEL1.539e-1831.88Putative protein tag-76 OS=Caenorhabditis elegans ... [more]
AGO15_ORYSJ4.633e-1530.40Protein argonaute 15 OS=Oryza sativa subsp. japoni... [more]
PIWL2_MOUSE1.068e-1133.07Piwi-like protein 2 OS=Mus musculus GN=Piwil2 PE=1... [more]
PIWL2_DANRE1.395e-1126.34Piwi-like protein 2 OS=Danio rerio GN=piwil2 PE=1 ... [more]
PIWL1_CHICK1.822e-1128.78Piwi-like protein 1 OS=Gallus gallus GN=PIWIL1 PE=... [more]
PIWL2_ONCMY3.108e-1134.65Piwi-like protein 2 OS=Oncorhynchus mykiss GN=piwi... [more]
PIWL1_DANRE3.108e-1132.56Piwi-like protein 1 OS=Danio rerio GN=piwil1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC31004E05EF AbioticL1 Citrus clementina cDNA clone C31004E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868765 ID=FC868765; Name=FC868765; organism=Citrus clementina; type=EST; length=732bp
TGCAGTGGCCTGTCTTATCTGAACCTGCTTCAATGCGTCTGTTCTCTAAT
GTTGGAGGGCTTCAGGAACTCCTTGAAGATGTTACTTCAAGGGCTTACAA
AATTGGCAAAGGTCATCTGCAGATTCTTATTTGTGTAATGTCTCGGAAGG
ATGACGGTTACAAGTATCTCAAGTGGATTTCTGAGACTAAAGTTGGTGTG
GTGACTCAGTGTTGTTTGTCCACGAATGCCAACAAAGGTAAAGGTCAAGA
TCAATATCTTGCCAATCTTGCACTCAAGATCAATGCGAAGCTTGGAGGCA
GCAACGCAGAGCTCATTGACAGGCTGCCTTACTTCAAGGGTGAAGACCAT
GTTATGTTTGTGGGTGCAGATGTTAATCATCCTGGTGCGAGTAACAAAAC
TAGTCCATCTATAGCAGCTGTTGTTGCCACTGTAAATTGGCCTGCTGCAA
ACAGATATGTGGCAAGGGTGCGCCCCCAAGATCATAGGACAGAGAAAATT
CTGAATTTTGCTGGCATGTGCTTGGAGGTTGTTAAATCTTATGTTCAGTT
GAATAAAGTCAGGCCACAAGAGATTATAGTGTTTCGAGATGGAGTAAGCG
AGGGCCAGTTCGATATGGTTCTCAATGAAGAGTTGGTACCACTAAAGATG
GCATTCAGATCAATGGATTACCACCCAAGAATCACACTTATTGTGGCCCA
GAAGCGACATCAAACTCGTCTATTTCCAAGGG
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