FC868767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.242e-23 Identity = 58/152 (38.16%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 177 AGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 626 AGPV+++ V +D +T GY +V F+ DA+ A+ +N + GKPIR+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E Sbjct: 34 AGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 25.409 bits (54), Expect = 1.242e-23 Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG+L VTE +L+E F Sbjct: 11 ASLYVGDLHSDVTEAMLYEKF 31 HSP 3 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 51/137 (37.23%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 222 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 N +GY FV F ++E AD AI+ +N + L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++ K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK Sbjct: 135 NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS-VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269 HSP 4 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 53/166 (31.93%), Postives = 89/166 (53.61%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 Q G ++V V +D +G+GFV + EDA+ A++ +N ++ GK I V +A Q++ S G NL+I NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + ++ + V+ A +K+ + Sbjct: 213 QFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSI-TSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.548e-23 Identity = 55/153 (35.95%), Postives = 91/153 (59.48%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTKGE 626 Q G V ++ V +D +T GY +V + S D + A++ LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+ AI+ +N L +++ V Y KKD + + Sbjct: 87 QIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNIL-SCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSK 237 HSP 2 Score: 32.7278 bits (73), Expect = 3.548e-23 Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG LDP VTE +L+ELF Sbjct: 65 ASLYVGELDPSVTEAMLFELF 85 HSP 3 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 52/171 (30.41%), Postives = 90/171 (52.63%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--RHGTPAERILAAN 665 G +++ V +D N +GYGFV + ++E A AIK +N + L K + V K + K ++ AN +++ N+ + ++ D F+ +G VT+ + RD + G SRGFGF+++ + E + A+E +NG+ + + V A KK + E R A R+ AN Sbjct: 177 GNILSCKVAQDENGN-SKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGD-VTSSSLARDSE-GKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKAN 344
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.550e-23 Identity = 53/145 (36.55%), Postives = 89/145 (61.38%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 G V ++ V +D VT GY +V + + D + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 75 GQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSC-KVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 217 HSP 2 Score: 33.113 bits (74), Expect = 3.550e-23 Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG LDP VTE +L+ELF Sbjct: 51 ASLYVGELDPSVTEAMLYELF 71 HSP 3 Score: 82.8037 bits (203), Expect = 1.959e-15 Identity = 53/156 (33.97%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 626 G +++ V +D N +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+DPDV E+ F FG I T+ + RDP+ G SRGFGF++Y + E++ AA++ M+ + + +++ V A KK + E Sbjct: 163 GNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEI-TSATLSRDPE-GKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREE 315
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 4.633e-23 Identity = 54/152 (35.53%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 177 AGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 626 AGP++++ V +D +T GY +V F+ DA+ A+ +N + G+P+R+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E Sbjct: 34 AGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182 HSP 2 Score: 25.409 bits (54), Expect = 4.633e-23 Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG+L VTE +L+E F Sbjct: 11 ASLYVGDLHQDVTEAMLYEKF 31 HSP 3 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 147 LRSYFGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 L+ FG + GP ++V V D +G+GFV F EDA A+ +N + GK + V +A QD+ + G NL++ NLD +D++ L F FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 207 LKEMFG---KYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 HSP 4 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 44/137 (32.12%), Postives = 80/137 (58.39%), Query Frame = 3 Query: 222 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 N +GYGFV F ++E A+ AI +N + L + + V + S+ ++ ++GA N++I N D++++ L + F +G ++ K+M D D G S+GFGF+S++ E + A++ MNG+ + + + V A KK Sbjct: 135 NGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALS-VKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKK 269
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 57/141 (40.43%), Postives = 91/141 (64.54%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 599 GPV ++ V +D VT GY +V F + ED + A+ LN + G+P R+ + +D +G N+FI NLDP +D K L+DTFSAFG I+ + K+ D + GN++G+GF+ +DS E+++AAIE +NG L ++++ V + Sbjct: 104 GPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKIL-SCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGH 242 HSP 2 Score: 80.8777 bits (198), Expect = 2.034e-15 Identity = 54/166 (32.53%), Postives = 89/166 (53.61%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 Q G + ++ + KD+ + +G+GFV + + E A A+ LN + GK + V +A + +K + G NLFI NL +VD++ L FSAFG I T+ KIM D + G S+GFGF+ Y + E ++ A+ MN + L + + V+ A +K+ + Sbjct: 283 QFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTI-TSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRKEVR 445 HSP 3 Score: 22.3274 bits (46), Expect = 2.034e-15 Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELF 172 Y+ NLD ++TE+ +LF Sbjct: 264 YIKNLDTEITEQEFSDLF 281 HSP 4 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 49/156 (31.41%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRV-NKASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 626 G +++ V D + N +GYGFV F S E A+ AI+ +N + L K + V + S+ ++ V A N++I NLD ++ E+ D F FG I T+ +++D + RGFGF++Y + E + A++ +N + +++ V A KK + E Sbjct: 192 GKILSCKVAVDELGNA-KGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEI-TSLSLVKDQND-KPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREE 344
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.844e-23 Identity = 58/151 (38.41%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 626 G V ++ V +D V+ GY +V + ED + AI+ LN + G+P R+ + +D + G N+FI NL P +D K L+DTFSAFG I+ + K+ D + G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + KKD + + Sbjct: 76 GQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKIL-SCKVATD-EFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 224 HSP 2 Score: 30.0314 bits (66), Expect = 7.844e-23 Identity = 13/31 (41.94%), Postives = 18/31 (58.06%), Query Frame = 2 Query: 80 GQHSAERNQDATAYVGNLDPQVTEELLWELF 172 G+ S A+ YVG L+P V E L+E+F Sbjct: 42 GESSGVAENSASLYVGELNPSVNEATLFEIF 72 HSP 3 Score: 82.8037 bits (203), Expect = 1.959e-15 Identity = 51/164 (31.10%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 G + ++Y+ KD+ +G+GFV F E A A++ LN ++ G+ I V +A + ++ L+ G NLF+ NLD +D + L + F FG I T+ K+M D + G S+GFGF+ + + E + AI MN + + + + V+ A +KD + Sbjct: 257 GKITSIYLEKDQ-DGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTI-TSAKVMVD-EAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDVR 417
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP_DEBHA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.021e-22 Identity = 60/151 (39.74%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 626 G V ++ V +D VT GY +V F ED + AI+ LN + G+P R+ + +D G N+FI NL P +D K L+DTF+AFG I+ + K+ D D G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + KKD + + Sbjct: 75 GQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKIL-SCKVATD-DMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESK 223 HSP 2 Score: 28.8758 bits (63), Expect = 1.021e-22 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG L+P V E LL+E+F Sbjct: 51 ASLYVGELNPSVNEALLFEIF 71 HSP 3 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 62/197 (31.47%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 159 FGSCFQA-GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPT 695 F F+A G + ++Y+ KD +G+GFV F + E A A+ LN ++ G+ I V +A + ++ L+ G NLFI NLD +D + L + F FG I T+ ++M D +TG S+GFGF+ + S E + AI MN + + + + V+ A +KD R ++I A N Q + T Sbjct: 248 FKKLFEAYGKITSIYLEKDH-EGKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGSI-TSARVMVD-ETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRKDV---RRSQLEQQIQARNQMRMQNAAAT 438
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.323e-22 Identity = 54/151 (35.76%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 626 G V ++ V +D VT GY +V + + D + A++ LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L ++++ V + KKD + + Sbjct: 79 GQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSK 227 HSP 2 Score: 32.7278 bits (73), Expect = 1.323e-22 Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELF 172 A+ YVG LDP VTE +L+ELF Sbjct: 55 ASLYVGELDPSVTEAMLFELF 75 HSP 3 Score: 80.1073 bits (196), Expect = 1.270e-14 Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 626 G +++ V +D N +GYGFV + + E A AIK +N + L K + V K + K ++ AN +++ N+D D E+ D F FG I T+ + RD ++G SRGFGF+++ S + + AA+EA+N + +++ V A KK + E Sbjct: 167 GNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEI-TSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREE 320
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.328e-22 Identity = 58/151 (38.41%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 626 G V ++ V +D VT GY +V F D AI+ LN + G+P R+ + +D G N+FI NL P +D K L+DTFSAFG I++ K+ D + G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + K+D + + Sbjct: 82 GQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSC-KVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESK 230 HSP 2 Score: 31.9574 bits (71), Expect = 1.328e-22 Identity = 15/33 (45.45%), Postives = 23/33 (69.70%), Query Frame = 2 Query: 80 GQHSAERNQDATA--YVGNLDPQVTEELLWELF 172 G+ + E ++A+A YVG L+P V E LL+E+F Sbjct: 46 GEGAGEEGEEASASLYVGELNPSVNEALLFEIF 78 HSP 3 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 620 GPV +V++ D+ +G+GFV F + E A A+K +N ++ G+ + V +A + ++ LD G NLF+ NLD +D + L + F FG I T+ ++M D D G S+GFGF+ + S E + AI MN + + + + V+ A +KD + Sbjct: 263 GPVTSVHLETDQ-EGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTI-TSARVMVD-DAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKDVR 423
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.330e-22 Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 593 G V ++ V +D +T GY +V F + A AI+ LN + GK R+ + +D GA N+FI NL PD+D K LYDTFS FG I+++ K+ D +TG S+GFG++ ++ E++ AI+A+NG L ++I V Sbjct: 59 GAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSS-KVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYV 195 HSP 2 Score: 28.4906 bits (62), Expect = 1.330e-22 Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 95 ERNQDATA----YVGNLDPQVTEELLWELF 172 E NQ T YVG+LDP V+E L+++F Sbjct: 26 EENQSETVSASLYVGDLDPSVSEAHLYDIF 55 HSP 3 Score: 82.8037 bits (203), Expect = 1.959e-15 Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 3 Query: 228 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKS 686 ++G+GFV F + EDA ++ LN + G+P+ VN+A + +K + G NLFI NLD +D+K L + F+ +G I T+ K+M + G S+GFGF+ + + E + AI N Q + + + V+ A +KD R A++I A N Q++ Sbjct: 255 NKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTI-TSAKVM-TTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDV---RRSQLAQQIQARNQMRFQQA 419 The following BLAST results are available for this feature:
BLAST of FC868767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868767 ID=FC868767; Name=FC868767; organism=Citrus clementina; type=EST; length=704bpback to top |