FC868785

Overview
NameFC868785
Unique NameFC868785
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA1_DICDI (Probable plasma membrane ATPase OS=Dictyostelium discoideum GN=patB PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 38/98 (38.78%), Postives = 47/98 (47.96%), Query Frame = 2 
Query:  341 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            P++ + E+LK +  GLT  E   RL   GPN               FMWNPLSW ME                 DW DF+ I  LL++N+TI FIEEN
Sbjct:  169 PLDNILEELKANANGLTKAEAQKRLEEVGPNAIPDVKRYPILEFLYFMWNPLSWTMEVAAIVSIALL-------DWVDFILICALLLLNATIGFIEEN 259
The following BLAST results are available for this feature:
BLAST of FC868785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PMA1_DICDI8.115e-1238.78Probable plasma membrane ATPase OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionC31004G05EF AbioticL1 Citrus clementina cDNA clone C31004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868785 ID=FC868785; Name=FC868785; organism=Citrus clementina; type=EST; length=728bp
GAATTGAAGCCAGTGTTCTCATTTTCTCAAATCGAATCACCAAACCAAAA
ACGACATTCATTTCACCAAAATTAAAAAATTCAATGCCCGTGGTACAAAA
TTTTCTTTTGTTAGACTTTTAATCAAGATGTCATCTTCGATTATGACTCT
CTGAGAAATTTCGCTTAGTCATTTTTATATATATTTTTAGAATATCCTCA
AATTTTACGTATATATAAATCGTTCACTCTTGCAAAGGAATTGTAAGAAA
CTCACAGTTGCTTGAGCTTCTACGATGGGCGGCGATAAGGCCATCAGCCT
CGAGGAAATCAAAAACGAGTCCGTTGATCTGGAACGGATTCCTATAGAGG
AAGTTTTTGAGCAGCTAAAATGTTCAAGAGAAGGTCTGACTTCGGACGAA
GGAGCCCACAGGCTTCATGTTTTTGGCCCCAACAAACTAGAAGAGAAAAA
GGAAAGCAAAGTCCTCAAGTTTTTGGGATTTATGTGGAATCCTTTGTCGT
GGGTCATGGAAGCTGCTGCCATTATGGCTATTGCCTTGGCCAATGGTGGT
GGAAGGGATCCTGATTGGCAGGATTTTGTTGGTATCATTGTCTTGTTGGT
AATCAACTCCACAATCAGCTTTATTGAAGAAAACATGCTGGCAATGCAGC
AGCAGCTCTCATGGCTAATCTGGCTCCTAAACTAAGGTTCTGAGAGATGG
CCGATGGAGTGAGCAAGATGCCTCGATT
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