FC868787

Overview
NameFC868787
Unique NameFC868787
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 8.941e-56
Identity = 108/195 (55.38%), Postives = 130/195 (66.67%), Query Frame = 1
Query:  115 MAKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            M K  E+E    AFG AA+D SG LSPF FSRR TG++DVR KVL+CGICHTDLS  KNEWG + +P+VPGHEI G VTE                     +C SC+SC +  ENYCPKMILT  + N D T+T+GGYSDHMV  E +I+R PD++PLD AAPLLCAG+TVYSP+KY GL +       + L GL
Sbjct:    1 MGKVLEKE----AFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGL 191          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.889e-55
Identity = 91/172 (52.91%), Postives = 120/172 (69.77%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQ 663
            +AFGWAA D SG LSPF FSRRE G+ DV +K+L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT   GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+G+ ++
Sbjct:    6 RAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE 177          

HSP 2 Score: 26.1794 bits (56), Expect = 4.889e-55
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  651 TSRTGKHVGIVGLGGLG 701
            T  +GK +G+ GLGGLG
Sbjct:  175 TKESGKRLGVNGLGGLG 191          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.886e-55
Identity = 97/184 (52.72%), Postives = 127/184 (69.02%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            KAFGWAA+D+SGHLSPF F+RR+   +DV LK+LYCG+CH+DL  +KN+WGF+ +P+VPGHEIAG VT+                     +C  CE C  DLE+YCPK + TY+S    GT T GGYSD +V ++R++++FPD++PLDA APLLCAGITVYSP+KY+G+ E         L GL
Sbjct:    5 KAFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNS-PYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGL 187          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.078e-54
Identity = 92/173 (53.18%), Postives = 120/173 (69.36%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTI-TYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQ 663
            KAFGWAA D SG LSPF FSRRE G+ DV +K+L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT    GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+G+ ++
Sbjct:    6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE 178          

HSP 2 Score: 26.1794 bits (56), Expect = 4.078e-54
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  651 TSRTGKHVGIVGLGGLG 701
            T  +GK +G+ GLGGLG
Sbjct:  176 TKESGKRLGVNGLGGLG 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 6.827e-51
Identity = 89/174 (51.15%), Postives = 113/174 (64.94%), Query Frame = 1
Query:  133 EEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 654
            E +   A GWAARD+SGHLSPF F+RR   ++DV +KVLYCGICHTDL  IKNEWG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y+VR P S+P D AAPLLCAG+TVYSP+  +GL
Sbjct:    2 EHNGTAALGWAARDTSGHLSPFSFTRRVQQEDDVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGL 175          

HSP 2 Score: 29.6462 bits (65), Expect = 6.827e-51
Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 3
Query:  663 GKHVGIVGLGGLG 701
            GKH+G+VGLGGLG
Sbjct:  179 GKHLGVVGLGGLG 191          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.291e-50
Identity = 93/187 (49.73%), Postives = 120/187 (64.17%), Query Frame = 1
Query:  139 HPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            H     GWAA D SG + PF F RRE G +DV +KV YCG+CHTDL  I N+WG +++P+VPGHEI G VT+                     +C  CE C    ENYC K+ LTY+ I  DG+ITYGGYS  +VA++R++VR PD++PLDAAAPLLCAGITVYSP+K  G+ + ++    L + GL
Sbjct:    7 HTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGL 193          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.298e-50
Identity = 90/171 (52.63%), Postives = 117/171 (68.42%), Query Frame = 1
Query:  187 LSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            LSPFKFSRR TGD DVR KVLYCG+CH+DL  +KNEWG + +P+VPGHEI G VTE                     +C SCE+C +D EN C K + TY+  N DG+ITYGGY+D MVA++ +++R+P+++PLD+ APLLCAGIT YSPL+Y GL +  +    + L GL
Sbjct:    2 LSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGL 172          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.633e-49
Identity = 99/195 (50.77%), Postives = 124/195 (63.59%), Query Frame = 1
Query:  118 AKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLD-AAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            A   E EHP KAFGWAARDSSG LSPF FSRR+ G+EDV L+VLYCGICHTDL   KN++G S++P VPGHE+ G V E                     +C SC++C ++LENYCPK ILT    + DGT TYGGYSD MV +E ++ R P+ +PLD   +  LC G + +SPLKY+GL +       + L GL
Sbjct:    3 ASQVEFEHPRKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGL 196          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.752e-49
Identity = 94/203 (46.31%), Postives = 121/203 (59.61%), Query Frame = 1
Query:   91 NIAVLSSKMAKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            N+    +  A+   EEH   A GWAARD SG LSP+ FSRR   D+DV +KVLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD +V NE Y++R P  +PLD AAPLLCAG+TVYSP+   GL         + L GL
Sbjct:   63 NLQRARASAAEQGMEEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGL 265          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 8.106e-49
Identity = 96/206 (46.60%), Postives = 122/206 (59.22%), Query Frame = 1
Query:   91 NIAVLSSKMAKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTD---GTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            N+    +  A+   EEH   A GWAARD SG LSP+ FSRR   D+DV +KVLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C  CE C N  ENYC KM+ T + ++ D   G  T GG+SD +V NE Y++R P  +PLD+AAPLLCAG+TVYSP+   GL         + L GL
Sbjct:   63 NLQRARASAAEQGMEEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGL 268          
The following BLAST results are available for this feature:
BLAST of FC868787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CADH7_ARATH8.941e-5655.38Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH3_ARATH4.889e-5552.91Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
MTDH1_STYHU9.886e-5552.72Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH2_ARATH4.078e-5453.18Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CAD8D_ORYSJ6.827e-5151.15Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH6_ORYSJ3.291e-5049.73Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
MTDH_PETCR4.298e-5052.63Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH3_STYHU1.633e-4950.77Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CAD8B_ORYSJ4.752e-4946.31Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CAD8C_ORYSJ8.106e-4946.60Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionC31004G07EF AbioticL1 Citrus clementina cDNA clone C31004G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868787 ID=FC868787; Name=FC868787; organism=Citrus clementina; type=EST; length=717bp
TGTACACACATGAATATTCATATGAAACAAAAACAAAAACAGGTACTTTC
ACTCGTCTCATCACGTCGTTCAAACCACTATAATAATGATAACATTGCCG
TTCTCTCATCCAAAATGGCAAAATCACGAGAAGAAGAACATCCAGTAAAG
GCCTTTGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAA
ATTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGT
ATTGTGGGATCTGCCATACTGATCTCTCCAACATCAAGAATGAATGGGGC
TTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGAC
AGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAG
TTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGAC
CTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACAC
TGACGGAACAATCACATACGGAGGCTACTCTGATCACATGGTTGCCAATG
AGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCC
CCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGG
ACTAGCAGAACAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGG
TCAGTCGCTGTCAAATT
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