FC868787

Overview
NameFC868787
Unique NameFC868787
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.059e-48
Identity = 95/197 (48.22%), Postives = 124/197 (62.94%), Query Frame = 1
Query:  136 EHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCP-KMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDS--------MPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            +H  KA G AA D SGHL+P + SRR+TGD+DV +KVLYCGICH+DL  IKNEW  +++P+V GHEI G VTE                      C  CESC +  ENYC   ++ TY+S++ DGT TYGGYSD +V ++R++VRFP S        +PLD+ APLLCAG+TVY+P++  GL E       + L GL
Sbjct:   18 QHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGL 214          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.529e-47
Identity = 90/192 (46.88%), Postives = 121/192 (63.02%), Query Frame = 1
Query:  124 SREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            S E E  V   G+AARDSSGHLSP+ ++ R  G EDV ++V+YCGICH+DL  + NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TVYSP+K+FG+ E       L L G+
Sbjct:    3 SLESERTVT--GYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.997e-47
Identity = 86/181 (47.51%), Postives = 117/181 (64.64%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            G+AARDSSGHLSP+ ++ R  G EDV ++V+YCGICH+DL  + NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TVYSP+K+FG+ E       L L G+
Sbjct:   12 GYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.997e-47
Identity = 90/189 (47.62%), Postives = 115/189 (60.85%), Query Frame = 1
Query:  133 EEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            E     A GWAARD+SGHLSPF F+RR   ++DV +KVLYCGICHTDL  IKNEWG +++P+VPGHEI G V                       +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y++R P S+P D AAPLLCAG+TVYSP+  +GL         + L GL
Sbjct:    2 EHDGTAALGWAARDASGHLSPFSFTRRVQEEDDVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLGGL 190          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.448e-47
Identity = 86/171 (50.29%), Postives = 111/171 (64.91%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAE 660
            K  GWAARD SG LSP+ ++ RETG EDV +K++YCGICHTD+  IKN+ G S +PMVPGHE+ GEV E                      C +C  C  D+E YC K I +Y+ + TDG  T GG+S HMV +++++V+ PD M  + AAPLLCAG+TVYSPL +FGL E
Sbjct:    9 KTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKE 179          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 7.587e-47
Identity = 85/184 (46.20%), Postives = 118/184 (64.13%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            K  GWAA DS+GHL+P+ +S R+TG EDV +KV+ CG+CHTD+  IKN+ G S +PMVPGHE+ GEV E                     +C +C  C +++E YC K I +Y+ + TDG  T GG+++ MV +++++VR PD M  + AAPLLCAG+TVYSPLK+FGL +       L L G+
Sbjct:    9 KIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.909e-47
Identity = 85/181 (46.96%), Postives = 118/181 (65.19%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            G+AARDSSGHLSP+ ++ R+ G EDV +KV+YCGICH+DL  ++NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TV+SP+K+F + E       L L G+
Sbjct:   12 GYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.909e-47
Identity = 85/181 (46.96%), Postives = 118/181 (65.19%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            G+AARDSSGHLSP+ ++ R+ G EDV +KV+YCGICH+DL  ++NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TV+SP+K+F + E       L L G+
Sbjct:   12 GYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.294e-46
Identity = 86/184 (46.74%), Postives = 117/184 (63.59%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            KA GWAARD SG LSP+ ++ R TG +DV +KV+ CGICHTD+  IKN+ G S +PMVPGHE+ GEV E                      C SC+ C+++LE YC K I +Y+ + TDG  T GG++D M+ N++++V+ P+ M ++ AAPLLCAG+TVYSPL +FGL         L L G+
Sbjct:   10 KALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGV 193          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.274e-45
Identity = 84/184 (45.65%), Postives = 111/184 (60.33%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            K  GWAARD++GHLSP+ ++ R TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL         L L G+
Sbjct:    9 KVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGV 192          
The following BLAST results are available for this feature:
BLAST of FC868787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CADH7_ORYSJ1.059e-4848.22Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH7_PICAB1.529e-4746.88Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB1.997e-4747.51Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CAD8A_ORYSJ1.997e-4747.62Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH1_ARACO4.448e-4750.29Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_POPDE7.587e-4746.20Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_PINTA9.909e-4746.96Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA9.909e-4746.96Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH4_ARATH1.294e-4646.74Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_MAIZE9.274e-4545.65Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]

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Properties
Property NameValue
Genbank descriptionC31004G07EF AbioticL1 Citrus clementina cDNA clone C31004G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868787 ID=FC868787; Name=FC868787; organism=Citrus clementina; type=EST; length=717bp
TGTACACACATGAATATTCATATGAAACAAAAACAAAAACAGGTACTTTC
ACTCGTCTCATCACGTCGTTCAAACCACTATAATAATGATAACATTGCCG
TTCTCTCATCCAAAATGGCAAAATCACGAGAAGAAGAACATCCAGTAAAG
GCCTTTGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAA
ATTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGT
ATTGTGGGATCTGCCATACTGATCTCTCCAACATCAAGAATGAATGGGGC
TTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGAC
AGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAG
TTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGAC
CTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACAC
TGACGGAACAATCACATACGGAGGCTACTCTGATCACATGGTTGCCAATG
AGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCC
CCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGG
ACTAGCAGAACAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGG
TCAGTCGCTGTCAAATT
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