FC868787

Overview
NameFC868787
Unique NameFC868787
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.066e-44
Identity = 85/181 (46.96%), Postives = 110/181 (60.77%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            GWAARD++GHLSP+ ++ R TG EDV LKVLYCGICHTDL   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL         L L G+
Sbjct:   13 GWAARDATGHLSPYTYNLRRTGAEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTPGLRGGILGLGGV 193          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.524e-44
Identity = 83/181 (45.86%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            GWAARD+SGHL+P+ ++ R+TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL         L L G+
Sbjct:   12 GWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.012e-44
Identity = 83/184 (45.11%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            K  GWAARD++GHL+P+ ++ R TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C+ C  ++E YC K I +Y+ + TDG  T GG++  MV +++++++ P  +  + AAPLLCAG+TVYSPLK FGL       A L L G+
Sbjct:    9 KVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.012e-44
Identity = 82/184 (44.57%), Postives = 111/184 (60.33%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            K  GWAARD SG LSP+ ++ RETG EDV ++++ CGICHTDL   KN+ G S +PMVPGHE+ GEV E                      C  C  C  DLE YCPK I +Y+ +  +G  T GG++   V +++++V+ P+ M ++ AAPLLCAG+TVYSPL +FGL +       L L G+
Sbjct:    9 KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.118e-44
Identity = 80/180 (44.44%), Postives = 108/180 (60.00%), Query Frame = 1
Query:  133 EEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFP------DSMPLDAAAPLLCAGITVYSPLKYFGL 654
            E+ P    GWAARD++G LSPF +  R  GDEDV +K+L+CGICH+DLS IKNEWG + +P+VPGHEI G V E                      C +C +C +  ENYC  ++ ++++   DG   +GG+S+  V N+RY+VR P         PLD  APLLCAG+TVY P++  GL
Sbjct:    2 EQQPKMVTGWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGL 181          

HSP 2 Score: 27.335 bits (59), Expect = 7.118e-44
Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 3
Query:  645 LWTSRTGKHVGIVGLGGLG 701
            L   R G H+G+ GLGGLG
Sbjct:  179 LGLDRPGVHLGVAGLGGLG 197          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.025e-43
Identity = 82/181 (45.30%), Postives = 110/181 (60.77%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            GWAARD SG LSP+ ++ R TG EDV +KVLYCG+CHTDL  +KN+ G S +P+VPGHE+ GEV E                     +C +C  C  D+E YC K I   + + TDG  T GG++  MV +++++V+ P+ M  + AAPLLCAGITVYSPL +FG  +       L L G+
Sbjct:   12 GWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.339e-43
Identity = 82/184 (44.57%), Postives = 114/184 (61.96%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            K  GWAARD SG LSP++++ R TG +DV ++V+ CGICHTD+  IKN+ G S +PMVPGHE+ GEV E                     +C +C  C +D+E YC K I +Y+ +  DG  T GG++  MV +++++V+ PD M  + AAPLLCAG+TVYSPL +FGL +       L L G+
Sbjct:    9 KTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.284e-43
Identity = 84/181 (46.41%), Postives = 108/181 (59.67%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  ER++V+ PD +  + AAPL+CAG+TVYSPL  FGL +       L L G+
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.983e-43
Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            GWAARD SG LSP+ +S R TG ED+ +KVL CG+CH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  ER++V+ PD +  + AAPL+CAG+TVYSPL  FGL +       L L G+
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.089e-43
Identity = 80/180 (44.44%), Postives = 112/180 (62.22%), Query Frame = 1
Query:  160 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            WAARD SG LSP+KF+RR    +DV L++ +CG+C+ D++  +N    S++P+VPGHEIAG VTE                     +C  CE+C + LENYC + + T++ ++TDGT+T GGYS H+V +ERY  + PD  PL+ AAPLLCAGITVYSP+    + +       + L GL
Sbjct:   13 WAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNNSMYPLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQPGKSLGVIGLGGL 192          
The following BLAST results are available for this feature:
BLAST of FC868787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CADH_LOLPR2.066e-4446.96Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH2_ORYSJ3.524e-4445.86Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_SACOF6.012e-4445.11Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH5_ARATH6.012e-4444.57Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH9_ORYSJ7.118e-4444.44Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH1_TOBAC1.025e-4345.30Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_OCIBA1.339e-4344.57Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_EUCGL2.284e-4346.41Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU2.983e-4345.86Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH1_ORYSJ5.089e-4344.44Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionC31004G07EF AbioticL1 Citrus clementina cDNA clone C31004G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868787 ID=FC868787; Name=FC868787; organism=Citrus clementina; type=EST; length=717bp
TGTACACACATGAATATTCATATGAAACAAAAACAAAAACAGGTACTTTC
ACTCGTCTCATCACGTCGTTCAAACCACTATAATAATGATAACATTGCCG
TTCTCTCATCCAAAATGGCAAAATCACGAGAAGAAGAACATCCAGTAAAG
GCCTTTGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAA
ATTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGT
ATTGTGGGATCTGCCATACTGATCTCTCCAACATCAAGAATGAATGGGGC
TTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGAC
AGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAG
TTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGAC
CTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACAC
TGACGGAACAATCACATACGGAGGCTACTCTGATCACATGGTTGCCAATG
AGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCC
CCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGG
ACTAGCAGAACAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGG
TCAGTCGCTGTCAAATT
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