FC868787

Overview
NameFC868787
Unique NameFC868787
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.681e-43
Identity = 83/181 (45.86%), Postives = 107/181 (59.12%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  ER++V+ PD +  + AAPL+CAG+TVY PL  FGL +       L L G+
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.934e-42
Identity = 79/180 (43.89%), Postives = 113/180 (62.78%), Query Frame = 1
Query:  160 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            WAARD SG LSP+KF+RRE   EDV L++ +CG+C+ D+   +N +  S++P+VPGHEIAG VTE                     +C  CE+C + LEN+C K ++TY+S+++DGT+T GGYS H++ ++RY  + P   PL  AAPLLCAGITVY+P+    + +       + L GL
Sbjct:   13 WAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGL 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.526e-42
Identity = 79/183 (43.17%), Postives = 111/183 (60.66%), Query Frame = 1
Query:  151 AFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            A GWAARD SG LSP+ ++ R TG EDV++KVLYCG+CH+DL  +KN+ G S +P+VPGHE+ G+V E                     +C +C  C  ++E YC K I   + + TDG  T GG+++ MV ++ ++V+ P+ M  + AAPLLCAGITVYSP  +FG  +       L L G+
Sbjct:   10 AIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGV 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.125e-41
Identity = 76/181 (41.99%), Postives = 110/181 (60.77%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            G AA+D SG L+P+ ++ R TG +DV +K+ YCG+CH+DL  IKN+ G S +PMVPGHE+ GEV E                      C SC +C +++E YC K I +Y+ + TDG IT GG+++  V  ++++V+ P+ +  +  APLLCAG+TVYSPL +FGL         L L G+
Sbjct:   13 GLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGV 193          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.532e-39
Identity = 80/181 (44.20%), Postives = 106/181 (58.56%), Query Frame = 1
Query:  157 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  +R++V+ PD +  +  A ++CAG+TVYSPL  FGL +       L L G+
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGV 191          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35
Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 1
Query:  160 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            WAARD SG LSP   +RR    +DV L + +CG+C+ D+   +N+ G S +P+VPGHEIAG VT+                     +C  CE C    E  C K + T++ I+ DG++T GGYS H+V +ERY  + P   PL++AAPLLCAGITVY+P+    + +       + L GL
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGL 193          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 75/181 (41.44%), Postives = 104/181 (57.46%), Query Frame = 1
Query:  160 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++  A   +  A + L GL
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWN-AGANTRVAIIGLGGL 186          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 75/181 (41.44%), Postives = 104/181 (57.46%), Query Frame = 1
Query:  160 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++  A   +  A + L GL
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWN-AGANTRVAIIGLGGL 186          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.025e-33
Identity = 69/170 (40.59%), Postives = 94/170 (55.29%), Query Frame = 1
Query:  145 VKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGT-ITYGGYSDHMVANERYIVRFPDSM-PLDAAAPLLCAGITVYSPLKYF 648
            +KA G  A  +   L P   +RRE G  DV++++ YCG+CH+DL  +++EW  +++P VPGHEI G V                       +C  CE C + LENYC  M  TY+S   D    T GGYS  +V +ERY++R       L A APLLCAGIT YSPL+++
Sbjct:    3 IKAVG--AYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW 170          

HSP 2 Score: 29.6462 bits (65), Expect = 2.025e-33
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  648 WTSRTGKHVGIVGLGGLG 701
            W +  GK VG+VG+GGLG
Sbjct:  170 WQAGPGKKVGVVGIGGLG 187          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.042e-32
Identity = 68/165 (41.21%), Postives = 97/165 (58.79%), Query Frame = 1
Query:  208 RRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPK-MILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            RR     DV + + + GICH+D+ +  +EWG  +FPMVPGHEIAG VT                      +C  CE C N  E +C K ++ TY+S++ DG  TYGGYS  +V  +R++VR PD + +D A+PLLCAGIT YSPLK++ +   + + A + + GL
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVGPGKKV-AIVGVGGL 189          
The following BLAST results are available for this feature:
BLAST of FC868787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
CADH1_EUCGU8.681e-4345.86Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH4_ORYSJ1.934e-4243.89Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH2_TOBAC2.526e-4243.17Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_MEDSA8.125e-4141.99Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_EUCBO1.532e-3944.20Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARATH2.290e-3540.56Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU5.101e-3541.44NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO5.101e-3541.44NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
YAHK_ECOLI2.025e-3340.59Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADHA_BACSU4.042e-3241.21Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31004G07EF AbioticL1 Citrus clementina cDNA clone C31004G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868787 ID=FC868787; Name=FC868787; organism=Citrus clementina; type=EST; length=717bp
TGTACACACATGAATATTCATATGAAACAAAAACAAAAACAGGTACTTTC
ACTCGTCTCATCACGTCGTTCAAACCACTATAATAATGATAACATTGCCG
TTCTCTCATCCAAAATGGCAAAATCACGAGAAGAAGAACATCCAGTAAAG
GCCTTTGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAA
ATTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGT
ATTGTGGGATCTGCCATACTGATCTCTCCAACATCAAGAATGAATGGGGC
TTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGAC
AGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAG
TTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGAC
CTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACAC
TGACGGAACAATCACATACGGAGGCTACTCTGATCACATGGTTGCCAATG
AGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCC
CCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGG
ACTAGCAGAACAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGG
TCAGTCGCTGTCAAATT
back to top